RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 SDHAF4Q5VUM1 108 aa12.2□□□□□ -0.46
LINC00963-220ENST00000625171 CCDC137Q6PK04 289 aaKnown RBP12.2□□□□□ -0.46
LINC00963-220ENST00000625171 BZW1Q7L1Q6 419 aaKnown RBP12.2□□□□□ -0.46
LINC00963-220ENST00000625171 DNAJB7Q7Z6W7 309 aaPredicted RBP12.2□□□□□ -0.46
LINC00963-220ENST00000625171 FAM131BQ86XD5 332 aa12.2□□□□□ -0.46
LINC00963-220ENST00000625171 CCDC185Q8N715 623 aa12.2□□□□□ -0.46
LINC00963-220ENST00000625171 STKLD1Q8NE28 680 aa12.2□□□□□ -0.46
LINC00963-220ENST00000625171 PCDH19Q8TAB3 1148 aa12.2□□□□□ -0.46
LINC00963-220ENST00000625171 GRK7Q8WTQ7 553 aa12.2□□□□□ -0.46
LINC00963-220ENST00000625171 HSPH1Q92598 858 aa12.2□□□□□ -0.46
LINC00963-220ENST00000625171 EDEM1Q92611 657 aa12.2□□□□□ -0.46
LINC00963-220ENST00000625171 CASP10Q92851 521 aa12.2□□□□□ -0.46
LINC00963-220ENST00000625171 MAK16Q9BXY0 300 aaKnown RBP12.2□□□□□ -0.46
LINC00963-220ENST00000625171 DDX47Q9H0S4 455 aaKnown RBP12.2□□□□□ -0.46
LINC00963-220ENST00000625171 GMIPQ9P107 970 aa12.2□□□□□ -0.46
LINC00963-220ENST00000625171 NEU2Q9Y3R4 380 aa12.2□□□□□ -0.46
LINC00963-220ENST00000625171 PRRG1O14668 218 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 RAD51CO43502 376 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 LIASO43766 372 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 CST8O60676 142 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 FGF19O95750 216 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 F11P03951 625 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 CD48P09326 243 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 BMP1P13497 986 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 KRT10P13645 584 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 DNAJB1P25685 340 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 ATP5C1P36542 298 aaKnown RBP12.19□□□□□ -0.46
LINC00963-220ENST00000625171 ARL4AP40617 200 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 CLCN4P51793 760 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 ATXN1P54253 815 aaKnown RBP12.19□□□□□ -0.46
LINC00963-220ENST00000625171 EPHA5P54756 1037 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 NME3Q13232 169 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 MTMR3Q13615 1198 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 KRT81Q14533 505 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 NAA30Q147X3 362 aaPredicted RBP12.19□□□□□ -0.46
LINC00963-220ENST00000625171 OASLQ15646 514 aaKnown RBP12.19□□□□□ -0.46
LINC00963-220ENST00000625171 CA9Q16790 459 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 ZFYVE27Q5T4F4 411 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 MANEALQ5VSG8 457 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 TTC27Q6P3X3 843 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 CCNI2Q6ZMN8 369 aaPredicted RBP12.19□□□□□ -0.46
LINC00963-220ENST00000625171 IFT20Q8IY31 132 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 PQLC3Q8N755 202 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 PLD5Q8N7P1 536 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 CCHCR1Q8TD31 782 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 CSPG4P5Q96PW8 444 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 ERP44Q9BS26 406 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 C17orf80Q9BSJ5 609 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 HEMGNQ9BXL5 484 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 CALN1Q9BXU9 219 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 LRRC3Q9BY71 257 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 RAB17Q9H0T7 212 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 DHX35Q9H5Z1 703 aaKnown RBP12.19□□□□□ -0.46
LINC00963-220ENST00000625171 FAM204AQ9H8W3 233 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 ALG13Q9NP73 1137 aaKnown RBP12.19□□□□□ -0.46
LINC00963-220ENST00000625171 TRPM5Q9NZQ8 1165 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 CWC15Q9P013 229 aaKnown RBP12.19□□□□□ -0.46
LINC00963-220ENST00000625171 AMACRQ9UHK6 382 aa12.19□□□□□ -0.46
LINC00963-220ENST00000625171 DMGDHQ9UI17 866 aaKnown RBP12.19□□□□□ -0.46
LINC00963-220ENST00000625171 CHD7Q9P2D1 2997 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.18□□□□□ -0.46
LINC00963-220ENST00000625171 WASH4PA8MWX3 477 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 H3BRJ5 948 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 I6L893 689 aaPredicted RBP12.18□□□□□ -0.46
LINC00963-220ENST00000625171 APOL1O14791 398 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 NCAM2O15394 837 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 TLR5O60602 858 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 LPXNO60711 386 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 SOAT2O75908 522 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 OLFM2O95897 454 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 GLUD1P00367 558 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 OAS1P00973 400 aaKnown RBP12.18□□□□□ -0.46
LINC00963-220ENST00000625171 CA3P07451 260 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 HNRNPA1P09651 372 aaKnown RBP eCLIP12.18□□□□□ -0.46
LINC00963-220ENST00000625171 KLRC2P26717 231 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 GJC1P36383 396 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 VCPP55072 806 aaKnown RBP12.18□□□□□ -0.46
LINC00963-220ENST00000625171 COG7P83436 770 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 DR1Q01658 176 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 ZNF33AQ06730 810 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 TWF1Q12792 350 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 CUL1Q13616 776 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 BYSLQ13895 437 aaKnown RBP12.18□□□□□ -0.46
LINC00963-220ENST00000625171 DPYSQ14117 519 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 PAFAH1B3Q15102 231 aaKnown RBP12.18□□□□□ -0.46
LINC00963-220ENST00000625171 NOMO1Q15155 1222 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 CCDC85BQ15834 202 aaPredicted RBP12.18□□□□□ -0.46
LINC00963-220ENST00000625171 C5orf22Q49AR2 442 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 HECTD3Q5T447 861 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 ARTNQ5T4W7 220 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 DUPD1Q68J44 220 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 UNC45BQ8IWX7 931 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 KLHL7Q8IXQ5 586 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 LEMD2Q8NC56 503 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 KREMEN2Q8NCW0 462 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 GPR152Q8TDT2 470 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 GIPC2Q8TF65 315 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 SLC22A17Q8WUG5 538 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 AUTS2Q8WXX7 1259 aa12.18□□□□□ -0.46
LINC00963-220ENST00000625171 FCRL2Q96LA5 508 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms