RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 SERPINB9P50453 376 aa8.59□□□□□ -1.03
SND1-IT1-201ENST00000623342 RASSF2P50749 326 aa8.59□□□□□ -1.03
SND1-IT1-201ENST00000623342 NBPF20Q3BBV1 942 aa8.59□□□□□ -1.03
SND1-IT1-201ENST00000623342 TAF1BQ53T94 588 aaPredicted RBP8.59□□□□□ -1.03
SND1-IT1-201ENST00000623342 OTUD1Q5VV17 481 aaPredicted RBP8.59□□□□□ -1.03
SND1-IT1-201ENST00000623342 TWF2Q6IBS0 349 aaKnown RBP8.59□□□□□ -1.03
SND1-IT1-201ENST00000623342 TRMT10BQ6PF06 316 aaKnown RBP8.59□□□□□ -1.03
SND1-IT1-201ENST00000623342 DENND5BQ6ZUT9 1274 aa8.59□□□□□ -1.03
SND1-IT1-201ENST00000623342 CYS1Q717R9 158 aa8.59□□□□□ -1.03
SND1-IT1-201ENST00000623342 BNIPLQ7Z465 357 aa8.59□□□□□ -1.03
SND1-IT1-201ENST00000623342 RFWD2Q8NHY2 731 aa8.59□□□□□ -1.03
SND1-IT1-201ENST00000623342 RNF139Q8WU17 664 aa8.59□□□□□ -1.03
SND1-IT1-201ENST00000623342 TBC1D31Q96DN5 1066 aa8.59□□□□□ -1.03
SND1-IT1-201ENST00000623342 TMEM237Q96Q45 408 aa8.59□□□□□ -1.03
SND1-IT1-201ENST00000623342 NPY6RQ99463 290 aa8.59□□□□□ -1.03
SND1-IT1-201ENST00000623342 FERMT1Q9BQL6 677 aa8.59□□□□□ -1.03
SND1-IT1-201ENST00000623342 NMRK2Q9NPI5 230 aa8.59□□□□□ -1.03
SND1-IT1-201ENST00000623342 SAR1AQ9NR31 198 aa8.59□□□□□ -1.03
SND1-IT1-201ENST00000623342 MKS1Q9NXB0 559 aa8.59□□□□□ -1.03
SND1-IT1-201ENST00000623342 PLLPQ9Y342 182 aa8.59□□□□□ -1.03
SND1-IT1-201ENST00000623342 M0QYT0 321 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 PTGESO14684 152 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 GABRDO14764 452 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 MFSD11O43934 449 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 UGT1A9O60656 530 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 BEST1O76090 585 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 T-ENOLP0DO92 83 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 CCND1P24385 295 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 ACAT1P24752 427 aaKnown RBP8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 GRIA1P42261 906 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 ARFIP2P53365 341 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 BEX3Q00994 111 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 E2F5Q15329 346 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 CST9Q5W186 159 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 WSCD1Q658N2 575 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 CDHR3Q6ZTQ4 885 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 CLEC20AQ6ZU45 233 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 PAQR9Q6ZVX9 377 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 MTDHQ86UE4 582 aaKnown RBP8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 TRIM42Q8IWZ5 723 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 SIX6OS1Q8N1H7 587 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 COLGALT1Q8NBJ5 622 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 STAMBPL1Q96FJ0 436 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 PPP1R10Q96QC0 940 aaKnown RBP8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 LGMNQ99538 433 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 MED10Q9BTT4 135 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 UGT1A7Q9HAW7 530 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 UGT1A10Q9HAW8 530 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 UGT1A8Q9HAW9 530 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 EIF2B3Q9NR50 452 aaKnown RBP8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 MOCS1Q9NZB8 636 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 KANSL3Q9P2N6 904 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 MTO1Q9Y2Z2 717 aaKnown RBP8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 Q9Y3F1 56 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 SF3B1O75533 1304 aaKnown RBP eCLIP8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 TRIP12Q14669 1992 aaPredicted RBP8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 SYNJ2BP-COX16A0A087WUM0 186 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 A0A0G2JND7 137 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 A8MUI8 341 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 HNRNPCL1O60812 293 aaKnown RBP8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 OPHN1O60890 802 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 CNTFP26441 200 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 GLUD2P49448 558 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 NDUFV1P49821 464 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 PITX1P78337 314 aaPredicted RBP8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 DEUP1Q05D60 604 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 AP1B1Q10567 949 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 BMPR2Q13873 1038 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 PDK1Q15118 436 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 MDH1BQ5I0G3 518 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 STEAP4Q687X5 459 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 LRRC8BQ6P9F7 803 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 ZNF449Q6P9G9 518 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 CCDC91Q7Z6B0 441 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 CLNKQ7Z7G1 428 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 AGAP11Q8TF27 550 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 DEPDC1BQ8WUY9 529 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 WNT8BQ93098 351 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 UTP4Q969X6 686 aaKnown RBP8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 SLC7A6OSQ96CW6 309 aaPredicted RBP8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 P2RY11Q96G91 374 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 OXNAD1Q96HP4 312 aaPredicted RBP8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 SLC2A13Q96QE2 648 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 TRIM56Q9BRZ2 755 aaKnown RBP8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 COX16Q9P0S2 106 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 NR2E3Q9Y5X4 410 aa8.58□□□□□ -1.04
SND1-IT1-201ENST00000623342 WDR27A2RRH5 827 aa8.57□□□□□ -1.04
SND1-IT1-201ENST00000623342 SDR42E2A6NKP2 422 aa8.57□□□□□ -1.04
SND1-IT1-201ENST00000623342 RNF103O00237 685 aa8.57□□□□□ -1.04
SND1-IT1-201ENST00000623342 EEF2KO00418 725 aaKnown RBP8.57□□□□□ -1.04
SND1-IT1-201ENST00000623342 TRAFD1O14545 582 aaPredicted RBP8.57□□□□□ -1.04
SND1-IT1-201ENST00000623342 PPP1R12AO14974 1030 aaPredicted RBP8.57□□□□□ -1.04
SND1-IT1-201ENST00000623342 CREB3O43889 395 aa8.57□□□□□ -1.04
SND1-IT1-201ENST00000623342 WFS1O76024 890 aa8.57□□□□□ -1.04
SND1-IT1-201ENST00000623342 ALDH1A2O94788 518 aa8.57□□□□□ -1.04
SND1-IT1-201ENST00000623342 CELF2O95319 508 aaKnown RBP8.57□□□□□ -1.04
SND1-IT1-201ENST00000623342 CBX6O95503 412 aa8.57□□□□□ -1.04
SND1-IT1-201ENST00000623342 FAM200BP0CF97 657 aa8.57□□□□□ -1.04
SND1-IT1-201ENST00000623342 HOXC8P31273 242 aa8.57□□□□□ -1.04
SND1-IT1-201ENST00000623342 CRHR1P34998 444 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms