RNA–Protein interactions for RNA: ENST00000621104.4

CCDC144B-209, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 2

Gene CCDC144B, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-209ENST00000621104 NEK3P51956 506 aa4.29□□□□□ -1.72
CCDC144B-209ENST00000621104 CBFBQ13951 182 aa4.29□□□□□ -1.72
CCDC144B-209ENST00000621104 RBMS2Q15434 407 aaKnown RBP4.29□□□□□ -1.72
CCDC144B-209ENST00000621104 TRIM71Q2Q1W2 868 aaKnown RBP4.29□□□□□ -1.72
CCDC144B-209ENST00000621104 MSANTD2Q6P1R3 559 aa4.29□□□□□ -1.72
CCDC144B-209ENST00000621104 RBM44Q6ZP01 1051 aaKnown RBP4.29□□□□□ -1.72
CCDC144B-209ENST00000621104 TFAP2DQ7Z6R9 452 aa4.29□□□□□ -1.72
CCDC144B-209ENST00000621104 PIP4P1Q86T03 277 aa4.29□□□□□ -1.72
CCDC144B-209ENST00000621104 ANKRD13BQ86YJ7 626 aa4.29□□□□□ -1.72
CCDC144B-209ENST00000621104 UEVLDQ8IX04 471 aa4.29□□□□□ -1.72
CCDC144B-209ENST00000621104 LAS2Q8IYD9 372 aa4.29□□□□□ -1.72
CCDC144B-209ENST00000621104 NANOGP1Q8N7R0 232 aa4.29□□□□□ -1.72
CCDC144B-209ENST00000621104 SVIPQ8NHG7 77 aa4.29□□□□□ -1.72
CCDC144B-209ENST00000621104 MPLKIPQ8TAP9 179 aa4.29□□□□□ -1.72
CCDC144B-209ENST00000621104 PARD3BQ8TEW8 1205 aa4.29□□□□□ -1.72
CCDC144B-209ENST00000621104 TM2D2Q9BX73 214 aa4.29□□□□□ -1.72
CCDC144B-209ENST00000621104 SPRTNQ9H040 489 aaPredicted RBP4.29□□□□□ -1.72
CCDC144B-209ENST00000621104 AGO4Q9HCK5 861 aaKnown RBP4.29□□□□□ -1.72
CCDC144B-209ENST00000621104 NFU1Q9UMS0 254 aa4.29□□□□□ -1.72
CCDC144B-209ENST00000621104 AFG3L2Q9Y4W6 797 aa4.29□□□□□ -1.72
CCDC144B-209ENST00000621104 C2CD4BA6NLJ0 364 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 J3KTA2 159 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 ADAM10O14672 748 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 NPC1O15118 1278 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 PLIN1O60240 522 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 BMP15O95972 392 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 IGKV2-30P06310 120 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 ITGA5P08648 1049 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 SRGAP2BP0DMP2 458 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 TFEBP19484 476 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 HOXA7P31268 230 aaPredicted RBP4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 SLC8A1P32418 973 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 IDUAP35475 653 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 ZNF84P51523 738 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 ZNF91Q05481 1191 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 DMWDQ09019 674 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 RABEP1Q15276 862 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 EARS2Q5JPH6 523 aaKnown RBP4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 EPHA10Q5JZY3 1008 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 GLCCI1Q86VQ1 547 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 RFX6Q8HWS3 928 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 FAM186BQ8IYM0 893 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 WIPF2Q8TF74 440 aaPredicted RBP4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 PIGKQ92643 395 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 KIAA1191Q96A73 305 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 FAR2Q96K12 515 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 ZFYVE19Q96K21 471 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 ELAC2Q9BQ52 826 aaKnown RBP4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 TRMOQ9BU70 441 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 NLRC4Q9NPP4 1024 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 FSCN3Q9NQT6 498 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 FBXO28Q9NVF7 368 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 ASNSD1Q9NWL6 643 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 VPS4AQ9UN37 437 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 PCDHB7Q9Y5E2 793 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 PCDHGB2Q9Y5G2 931 aa4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 HEMK1Q9Y5R4 338 aaPredicted RBP4.28□□□□□ -1.72
CCDC144B-209ENST00000621104 ZNF335Q9H4Z2 1342 aaPredicted RBP4.27□□□□□ -1.73
CCDC144B-209ENST00000621104 PNMA6EA0A0J9YXQ4 647 aa4.27□□□□□ -1.73
CCDC144B-209ENST00000621104 TAF5LO75529 589 aa4.27□□□□□ -1.73
CCDC144B-209ENST00000621104 ENO1P06733 434 aaKnown RBP4.27□□□□□ -1.73
CCDC144B-209ENST00000621104 NPPBP16860 134 aa4.27□□□□□ -1.73
CCDC144B-209ENST00000621104 VPS41P49754 854 aa4.27□□□□□ -1.73
CCDC144B-209ENST00000621104 GAB1Q13480 694 aa4.27□□□□□ -1.73
CCDC144B-209ENST00000621104 STIM1Q13586 685 aa4.27□□□□□ -1.73
CCDC144B-209ENST00000621104 ELF2Q15723 593 aa4.27□□□□□ -1.73
CCDC144B-209ENST00000621104 KYAT3Q6YP21 454 aaKnown RBP4.27□□□□□ -1.73
CCDC144B-209ENST00000621104 KRT27Q7Z3Y8 459 aa4.27□□□□□ -1.73
CCDC144B-209ENST00000621104 SRLQ86TD4 932 aa4.27□□□□□ -1.73
CCDC144B-209ENST00000621104 ZFPM2Q8WW38 1151 aa4.27□□□□□ -1.73
CCDC144B-209ENST00000621104 NPIPB3Q92617 1050 aa4.27□□□□□ -1.73
CCDC144B-209ENST00000621104 CELF1Q92879 486 aaKnown RBP4.27□□□□□ -1.73
CCDC144B-209ENST00000621104 TMEM41AQ96HV5 264 aa4.27□□□□□ -1.73
CCDC144B-209ENST00000621104 TRIM2Q9C040 744 aa4.27□□□□□ -1.73
CCDC144B-209ENST00000621104 MLXIPLQ9NP71 852 aa4.27□□□□□ -1.73
CCDC144B-209ENST00000621104 TMEM184CQ9NVA4 438 aa4.27□□□□□ -1.73
CCDC144B-209ENST00000621104 SLC39A10Q9ULF5 831 aa4.27□□□□□ -1.73
CCDC144B-209ENST00000621104 EMSYQ7Z589 1322 aa4.26□□□□□ -1.73
CCDC144B-209ENST00000621104 SLC22A23A1A5C7 686 aa4.26□□□□□ -1.73
CCDC144B-209ENST00000621104 M0QZQ0 153 aa4.26□□□□□ -1.73
CCDC144B-209ENST00000621104 ANXA6P08133 673 aa4.26□□□□□ -1.73
CCDC144B-209ENST00000621104 HMGB1P09429 215 aaKnown RBP4.26□□□□□ -1.73
CCDC144B-209ENST00000621104 ALADP13716 330 aa4.26□□□□□ -1.73
CCDC144B-209ENST00000621104 PRF1P14222 555 aa4.26□□□□□ -1.73
CCDC144B-209ENST00000621104 ABCB4P21439 1286 aa4.26□□□□□ -1.73
CCDC144B-209ENST00000621104 STAT6P42226 847 aa4.26□□□□□ -1.73
CCDC144B-209ENST00000621104 SOX2P48431 317 aa4.26□□□□□ -1.73
CCDC144B-209ENST00000621104 AGTR2P50052 363 aa4.26□□□□□ -1.73
CCDC144B-209ENST00000621104 B4GALNT1Q00973 533 aa4.26□□□□□ -1.73
CCDC144B-209ENST00000621104 P3H1Q32P28 736 aa4.26□□□□□ -1.73
CCDC144B-209ENST00000621104 FAM57BQ71RH2 274 aa4.26□□□□□ -1.73
CCDC144B-209ENST00000621104 ARFGAP1Q8N6T3 406 aa4.26□□□□□ -1.73
CCDC144B-209ENST00000621104 RSC1A1Q92681 617 aa4.26□□□□□ -1.73
CCDC144B-209ENST00000621104 TRMT61AQ96FX7 289 aaKnown RBP4.26□□□□□ -1.73
CCDC144B-209ENST00000621104 TTLL2Q9BWV7 592 aa4.26□□□□□ -1.73
CCDC144B-209ENST00000621104 ARFGAP3Q9NP61 516 aa4.26□□□□□ -1.73
CCDC144B-209ENST00000621104 PAPOLBQ9NRJ5 636 aaKnown RBP4.26□□□□□ -1.73
CCDC144B-209ENST00000621104 FNIP2Q9P278 1114 aa4.26□□□□□ -1.73
CCDC144B-209ENST00000621104 LOC105369274A0A096LPK9 316 aa4.25□□□□□ -1.73
CCDC144B-209ENST00000621104 LOC102723532A0A0G2JNH3 316 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms