RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 F8W8V4 182 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 BUD23O43709 281 aaKnown RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 TGDSO95455 350 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 HNRNPCP07910 306 aaKnown RBP eCLIP7.17□□□□□ -1.261e-6■■■■□ 21.3
NEDD9-216ENST00000620854 DHRS4L1P0CG22 281 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 TBL3Q12788 808 aaKnown RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 PDK1Q15118 436 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 ZNF699Q32M78 642 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 HSP90AA5PQ58FG0 334 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 SPDYAQ5MJ70 313 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 SLFN12LQ6IEE8 588 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 ARPINQ7Z6K5 226 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 PDSS2Q86YH6 399 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 APLFQ8IW19 511 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 TRIML2Q8N7C3 387 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 CCNYL1Q8N7R7 359 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 STKLD1Q8NE28 680 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 ZC3H15Q8WU90 426 aaKnown RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 OLFM3Q96PB7 478 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 RPF1Q9H9Y2 349 aaKnown RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 DNAAF2Q9NVR5 837 aaKnown RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 ATXN10Q9UBB4 475 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 POLIQ9UNA4 740 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 VWA5AO00534 786 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 XPO1O14980 1071 aaKnown RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 XPOTO43592 962 aaKnown RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 SIN3BO75182 1162 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 KRT38O76015 456 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 STIP1P31948 543 aaKnown RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 RGS7P49802 495 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 LSAMPQ13449 338 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 NRF1Q16656 503 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 ZC3H12AQ5D1E8 599 aaKnown RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 HABP4Q5JVS0 413 aaKnown RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 FAM102AQ5T9C2 384 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 N4BP2L1Q5TBK1 243 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 TRIM72Q6ZMU5 477 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 FRMD7Q6ZUT3 714 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 CATSPER4Q7RTX7 472 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 CCDC60Q8IWA6 550 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 FAM156AQ8NDB6 213 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 GPRASP2Q96D09 838 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 CLMNQ96JQ2 1002 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 FBXL18Q96ME1 805 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 CPXM1Q96SM3 734 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 CCDC106Q9BWC9 280 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 SPATC1LQ9H0A9 340 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 MROH8Q9H579 483 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 COPS7BQ9H9Q2 264 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 CHCHD3Q9NX63 227 aaKnown RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 POMPQ9Y244 141 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 LZTS1Q9Y250 596 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 ZNFX1Q9P2E3 1918 aaKnown RBP7.16□□□□□ -1.26
NEDD9-216ENST00000620854 LAMB2P55268 1798 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 A0A1B0GTW7 788 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 ZBBXA8MT70 800 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 MED7O43513 233 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 RFPL1O75677 317 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 DGAT1O75907 488 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 BCAR1P56945 870 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 PRKCEQ02156 737 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 ITGA9Q13797 1035 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 CCNIQ14094 377 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 TLR1Q15399 786 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 C6orf52Q5T4I8 152 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 DRICH1Q6PGQ1 229 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-216ENST00000620854 CHSY1Q86X52 802 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 CCDC117Q8IWD4 279 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-216ENST00000620854 ZSCAN18Q8TBC5 510 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-216ENST00000620854 SKA2Q8WVK7 121 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-216ENST00000620854 VCPIP1Q96JH7 1222 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 PDCD2LQ9BRP1 358 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 OXCT2Q9BYC2 517 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-216ENST00000620854 UNKQ9C0B0 810 aaKnown RBP7.16□□□□□ -1.26
NEDD9-216ENST00000620854 KLC2Q9H0B6 622 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 DDX56Q9NY93 547 aaKnown RBP7.16□□□□□ -1.26
NEDD9-216ENST00000620854 CNTN3Q9P232 1028 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 EPS15L1Q9UBC2 864 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 CYTH4Q9UIA0 394 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 CDH22Q9UJ99 828 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 USP18Q9UMW8 372 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 DTNAQ9Y4J8 743 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 TEX264Q9Y6I9 313 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 COMMD3-BMI1R4GMX3 469 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 KIF13BQ9NQT8 1826 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 GLTPD2A6NH11 291 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 FOXD2O60548 495 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-216ENST00000620854 AMHP03971 560 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 KRT7P08729 469 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 ADORA2AP29274 412 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 SLC1A6P48664 564 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 CHN2P52757 468 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 STX1BP61266 288 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 SLC18A2Q05940 514 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 MYBPC3Q14896 1274 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 PGM5Q15124 567 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 BBS12Q6ZW61 710 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 ACAD11Q709F0 780 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 MTMR14Q8NCE2 650 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms