RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 DONSONQ9NYP3 566 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 SMIM35A0A1B0GVV1 85 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 EIF4E1BA6NMX2 242 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 CLDN5O00501 218 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 C2CD2LO14523 706 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 FCHO1O14526 889 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 USP12O75317 370 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 FAM155BO75949 473 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 JCHAINP01591 159 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 SKIV2L2P42285 1042 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 RPL10AP62906 217 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 USP10Q14694 798 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 CA9Q16790 459 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 TAF2Q6P1X5 1199 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 TTC30AQ86WT1 665 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 STKLD1Q8NE28 680 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 STK32AQ8WU08 396 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 INPP5DQ92835 1189 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 FETUBQ9UGM5 382 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 SLC12A4Q9UP95 1085 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 BHMG1C9JSJ3 638 aaPredicted RBP9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 NCAM2O15394 837 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 PDHA1P08559 390 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 ODC1P11926 461 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 CACNB2Q08289 660 aaPredicted RBP9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 SNX17Q15036 470 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 DNAL1Q4LDG9 190 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 FASTKD1Q53R41 847 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 N4BP2L1Q5TBK1 243 aaPredicted RBP9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 ZCCHC23Q6ZST2 131 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 STRADAQ7RTN6 431 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 IPMKQ8NFU5 416 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 CCDC124Q96CT7 223 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 OXNAD1Q96HP4 312 aaPredicted RBP9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 SNX27Q96L92 541 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 TBC1D10AQ9BXI6 508 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 CXorf56Q9H5V9 222 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 UBP1Q9NZI7 540 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 ARMCX1Q9P291 453 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 NRXN2Q9P2S2 1712 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 SLC39A10Q9ULF5 831 aa9.48□□□□□ -0.89
RBFOX1-223ENST00000620507 SLC15A5A6NIM6 579 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 IQCF3P0C7M6 154 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 PGAM1P18669 254 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 LMO2P25791 158 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 PSMB4P28070 264 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 MLH1P40692 756 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 PTPN9P43378 593 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 INCA1Q0VD86 236 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 SLC25A52Q3SY17 297 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 MMEL1Q495T6 779 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 SWT1Q5T5J6 900 aaKnown RBP9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 UNC5AQ6ZN44 842 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 STRA8Q7Z7C7 330 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 LPIN3Q9BQK8 851 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 TASP1Q9H6P5 420 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 SLC24A3Q9HC58 644 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 SSU72Q9NP77 194 aaKnown RBP9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 VANGL2Q9ULK5 521 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 BRWD3Q6RI45 1802 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 FAM237BA0A1B0GVD1 139 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 PPEF2O14830 753 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 GIPC1O14908 333 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 XPO1O14980 1071 aaKnown RBP9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 CFLARO15519 480 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 KLHL2O95198 593 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 USP17L7P0C7H9 530 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 GP5P40197 560 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 THPOP40225 353 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 ATXN1P54253 815 aaKnown RBP9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 MRPS5P82675 430 aaKnown RBP9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 BST1Q10588 318 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 HIC1Q14526 733 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 FSCN1Q16658 493 aaKnown RBP9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 UGP2Q16851 508 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 PARP6Q2NL67 630 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 PPP1R15BQ5SWA1 713 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 SCARA3Q6AZY7 606 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 TMEM110Q86TL2 294 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 TMEM130Q8N3G9 435 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 TEX9Q8N6V9 391 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 HASPINQ8TF76 798 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 NDRG1Q92597 394 aaKnown RBP9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 PEBP4Q96S96 227 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 DNAJC16Q9Y2G8 782 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 GREB1LQ9C091 1923 aaPredicted RBP9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 CLUHO75153 1309 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 LOXHD1Q8IVV2 1947 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 LOC100653049A0A140TA62 436 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 GPR182O15218 404 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 PSMD3O43242 534 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 KRT34O76011 436 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 LTFP02788 710 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 YY1P25490 414 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 GCKP35557 465 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 GABRB2P47870 512 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 AP2B1P63010 937 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 CCDC15Q0P6D6 951 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms