RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 MTMR11A4FU01 709 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 FAM72CH0Y354 149 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 H3BRJ5 948 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 I6L893 689 aaPredicted RBP13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 EEF2KO00418 725 aaKnown RBP13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 KCNN4O15554 427 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 BAIAP3O94812 1187 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 F9P00740 461 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 ZFXP17010 805 aaPredicted RBP13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 RPL17P18621 184 aaKnown RBP13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 RPL22P35268 128 aaKnown RBP13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 MAGEA11P43364 429 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 SEC24CP53992 1094 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 EIF3BP55884 814 aaKnown RBP13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 CCDC38Q502W7 563 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 SPDYCQ5MJ68 293 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 FAM72AQ5TYM5 149 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 NCBP2-AS2Q69YL0 99 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 FAM72DQ6L9T8 149 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 MFSD5Q6N075 450 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 KIAA1841Q6NSI8 718 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 FAM72BQ86X60 149 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 NETO2Q8NC67 525 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 PGAP3Q96FM1 320 aaPredicted RBP13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 C8orf48Q96LL4 319 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 SLC9A7Q96T83 725 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 TKTL2Q9H0I9 626 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 NMUR1Q9HB89 426 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 ARHGEF4Q9NR80 690 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 ABCC13Q9NSE7 274 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 SFMBT1Q9UHJ3 866 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 GOLGA8MH3BSY2 632 aa13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 MSI1O43347 362 aaKnown RBP13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 RBL1P28749 1068 aa13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 LSP1P33241 339 aa13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 MDH1P40925 334 aaKnown RBP13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 USP46P62068 366 aa13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 BASP1P80723 227 aaKnown RBP13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 SLC10A2Q12908 348 aaPredicted RBP13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 MTM1Q13496 603 aa13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 SCD5Q86SK9 330 aa13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 BCAS4Q8TDM0 211 aa13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 C2orf15Q8WU43 125 aaKnown RBP13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 CRISPLD1Q9H336 500 aa13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 CTNNAL1Q9UBT7 734 aa13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 RSPH14Q9UHP6 348 aa13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 SNX10Q9Y5X0 201 aa13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 EFEMP2O95967 443 aa13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 PPP2R2AP63151 447 aa13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 GAD2Q05329 585 aa13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 DUSP4Q13115 394 aa13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 GPR17Q13304 367 aa13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 USP41Q3LFD5 358 aa13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 RFX8Q6ZV50 586 aa13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 HOOK3Q86VS8 718 aa13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 NTAN1Q96AB6 310 aa13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 TLCD1Q96CP7 247 aa13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 ZNF689Q96CS4 500 aaPredicted RBP13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 IGSF21Q96ID5 467 aa13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 NINJ2Q9NZG7 142 aa13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 RCOR3Q9P2K3 495 aaPredicted RBP13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 SLC12A6Q9UHW9 1150 aa13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 MYO16Q9Y6X6 1858 aa13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 COL4A4P53420 1690 aaPredicted RBP13.14□□□□□ -0.31
TNFAIP3-209ENST00000619035 RGS16O15492 202 aaPredicted RBP13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 ADAM12O43184 909 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 MFSD11O43934 449 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 TBC1D4O60343 1298 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 BANF1O75531 89 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 HSPA1AP0DMV8 641 aaKnown RBP13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 HSPA1BP0DMV9 641 aaKnown RBP13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 STIP1P31948 543 aaKnown RBP13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 CXCR3P49682 368 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 TPI1P60174 286 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 WDR5P61964 334 aaKnown RBP13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 BTG3Q14201 252 aaPredicted RBP13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 FASTKD3Q14CZ7 662 aaKnown RBP13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 PSMD5Q16401 504 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 SYCP2LQ5T4T6 812 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 RNASEH2BQ5TBB1 312 aaKnown RBP13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 KCNT2Q6UVM3 1135 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 OTOP2Q7RTS6 562 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 FBXO22Q8NEZ5 403 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 SPPL2BQ8TCT7 592 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 CASP10Q92851 521 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 CEP295NLQ96MC4 621 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 RBM15Q96T37 977 aaKnown RBP eCLIP13.13□□□□□ -0.318e-7■■■■□ 20.8
TNFAIP3-209ENST00000619035 VN1R3Q9BXE9 311 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 TSPYL1Q9H0U9 437 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 FBXO44Q9H4M3 255 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 PPANQ9NQ55 473 aaKnown RBP13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 OSER1Q9NX31 292 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 DTLQ9NZJ0 730 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 GMIPQ9P107 970 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 ANKRD65E5RJM6 399 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 RASGRF2O14827 1237 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 VNN2O95498 520 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 OR1D2P34982 312 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 CCT5P48643 541 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 SCAPQ12770 1279 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms