RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 NPHS2Q9NP85 383 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 SLC5A4Q9NY91 659 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 VPS4AQ9UN37 437 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 SNX8Q9Y5X2 465 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 USP31Q70CQ4 1352 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 MED14O60244 1454 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 RAB19A4D1S5 217 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 RCVRNP35243 200 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 PPP4CP60510 307 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 LRRC74AQ0VAA2 488 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 RC3H1Q5TC82 1133 aaKnown RBP3.16□□□□□ -1.9
NEB-220ENST00000618972 SCYL2Q6P3W7 929 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 SCIMPQ6UWF3 145 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 LINC00523Q86TU6 105 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 RFFLQ8WZ73 363 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 FAF2Q96CS3 445 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 NMD3Q96D46 503 aaKnown RBP3.16□□□□□ -1.9
NEB-220ENST00000618972 TSPAN17Q96FV3 270 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 KCNK4Q9NYG8 393 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 NINJ2Q9NZG7 142 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 FAM172BPA6NC97 362 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 TAF4O00268 1085 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 P3H1Q32P28 736 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.16□□□□□ -1.9
NEB-220ENST00000618972 POU5F2Q8N7G0 328 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 TRIM62Q9BVG3 475 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 KIFC1Q9BW19 673 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 UMODL1Q5DID0 1318 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 EHBP1L1Q8N3D4 1523 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 FAM86C2PA6NEL3 165 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 DUOXA2Q1HG44 320 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 EDRF1Q3B7T1 1238 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 CLEC4FQ8N1N0 589 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 NDNQ99608 321 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 GAL3ST1Q99999 423 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 TBC1D10AQ9BXI6 508 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 DCLK3Q9C098 648 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 WBP4O75554 376 aaKnown RBP3.16□□□□□ -1.9
NEB-220ENST00000618972 EPHB2P29323 1055 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 CCT3P49368 545 aaKnown RBP3.16□□□□□ -1.9
NEB-220ENST00000618972 ZNF720Q7Z2F6 126 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 OR5B17Q8NGF7 314 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 ACTRT2Q8TDY3 377 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 ZSWIM1Q9BR11 485 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 PDGFDQ9GZP0 370 aaPredicted RBP3.16□□□□□ -1.9
NEB-220ENST00000618972 DENND2DQ9H6A0 471 aaPredicted RBP3.16□□□□□ -1.9
NEB-220ENST00000618972 CATSPERZQ9NTU4 200 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 WDR19Q8NEZ3 1342 aa3.16□□□□□ -1.9
NEB-220ENST00000618972 A0A1B0GTW7 788 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 ARHGEF35A5YM69 484 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 IL32P24001 234 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 PPM1NQ8N819 430 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 ZFYVE19Q96K21 471 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 WDR18Q9BV38 432 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 WDR11Q9BZH6 1224 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 ATF5Q9Y2D1 282 aaPredicted RBP3.15□□□□□ -1.9
NEB-220ENST00000618972 IRGMA1A4Y4 181 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 FCHO1O14526 889 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 GSC2O15499 205 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 HOXC6P09630 235 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 HNMTP50135 292 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 RBBP8Q99708 897 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 ZNF358Q9NW07 568 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 WDR35Q9P2L0 1181 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 PRLP01236 227 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 EIF2AK2P19525 551 aaKnown RBP3.15□□□□□ -1.9
NEB-220ENST00000618972 RFC4P35249 363 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 PLCL1Q15111 1095 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 AMIGO2Q86SJ2 522 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 E2F7Q96AV8 911 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 APOBEC3GQ9HC16 384 aaKnown RBP3.15□□□□□ -1.9
NEB-220ENST00000618972 EURLQ9NYK6 297 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 PFDN2Q9UHV9 154 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 RAB26Q9ULW5 256 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 C2CD2Q9Y426 696 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 GAS2O43903 313 aaKnown RBP3.15□□□□□ -1.9
NEB-220ENST00000618972 WFS1O76024 890 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 OR6B1O95007 311 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 LYPLA2O95372 231 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 FGFR1P11362 822 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 SPRP35270 261 aaPredicted RBP3.15□□□□□ -1.9
NEB-220ENST00000618972 ETFBP38117 255 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 RAD51Q06609 339 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 TNK2Q07912 1038 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 BLMHQ13867 455 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 CGB2Q6NT52 195 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 ASXL2Q76L83 1435 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 BBS4Q96RK4 519 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 CXCL16Q9H2A7 254 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 MARCOQ9UEW3 520 aaPredicted RBP3.15□□□□□ -1.9
NEB-220ENST00000618972 TMEM2Q9UHN6 1383 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 C9JVG2 144 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 TOP3BO95985 862 aaKnown RBP3.15□□□□□ -1.9
NEB-220ENST00000618972 IFNA7P01567 189 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 ARF4P18085 180 aaPredicted RBP3.15□□□□□ -1.9
NEB-220ENST00000618972 ATP2B4P23634 1241 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 KBTBD2Q8IY47 623 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 MIER2Q8N344 545 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 CCDC17Q96LX7 622 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 MAGEB10Q96LZ2 347 aaPredicted RBP3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms