RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 DEFB106AQ8N104 65 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 CCDC26Q8TAB7 109 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 IPO4Q8TEX9 1081 aaKnown RBP8.59□□□□□ -1.03
NEK3-209ENST00000618856 USP33Q8TEY7 942 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 CPA5Q8WXQ8 436 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 SYN2Q92777 582 aaPredicted RBP8.59□□□□□ -1.03
NEK3-209ENST00000618856 IQCDQ96DY2 449 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 LMLNQ96KR4 655 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 PCMTD1Q96MG8 357 aaPredicted RBP8.59□□□□□ -1.03
NEK3-209ENST00000618856 AGPAT1Q99943 283 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 NUP58Q9BVL2 599 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 BBS2Q9BXC9 721 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 FAM126AQ9BYI3 521 aaPredicted RBP8.59□□□□□ -1.03
NEK3-209ENST00000618856 SLC2A11Q9BYW1 496 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 SPATA6Q9NWH7 488 aaPredicted RBP8.59□□□□□ -1.03
NEK3-209ENST00000618856 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.59□□□□□ -1.03
NEK3-209ENST00000618856 RRN3Q9NYV6 651 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 MYOFQ9NZM1 2061 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 ITIH6Q6UXX5 1313 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 CCDC163A0A0D9SF12 145 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 ANTXRLA6NF34 631 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 LRRC53A6NM62 1247 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 NEDD8-MDP1E9PL57 170 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 GOLGA6L19H0YKK7 550 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 TRIM24O15164 1050 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 LAMTOR5O43504 91 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 ACSL4O60488 711 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 ATG13O75143 517 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 HMBSP08397 361 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 CCDC172P0C7W6 258 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 HOXD9P28356 352 aaPredicted RBP8.58□□□□□ -1.04
NEK3-209ENST00000618856 SLC6A4P31645 630 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 CXCL12P48061 93 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 SATB1Q01826 763 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 MTA1Q13330 715 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 ENPP2Q13822 863 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 ANO4Q32M45 955 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 SLC25A52Q3SY17 297 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 C5orf22Q49AR2 442 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 HSF5Q4G112 596 aaPredicted RBP8.58□□□□□ -1.04
NEK3-209ENST00000618856 PREPLQ4J6C6 727 aaPredicted RBP8.58□□□□□ -1.04
NEK3-209ENST00000618856 MPPE1Q53F39 396 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 DCAF6Q58WW2 860 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 PPP1R15BQ5SWA1 713 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 PIK3R6Q5UE93 754 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 NAA35Q5VZE5 725 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 HGSNATQ68CP4 663 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 NADSYN1Q6IA69 706 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 OR6B2Q6IFH4 312 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 MON1BQ7L1V2 547 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 CACNA2D4Q7Z3S7 1137 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 SFTPA1Q8IWL2 248 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.58□□□□□ -1.04
NEK3-209ENST00000618856 TERB1Q8NA31 727 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 TTC16Q8NEE8 873 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 SLC30A5Q8TAD4 765 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 CENPIQ92674 756 aaPredicted RBP8.58□□□□□ -1.04
NEK3-209ENST00000618856 FAM149B1Q96BN6 582 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 VCPIP1Q96JH7 1222 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 PRICKLE1Q96MT3 831 aaPredicted RBP8.58□□□□□ -1.04
NEK3-209ENST00000618856 XPO6Q96QU8 1125 aaKnown RBP8.58□□□□□ -1.04
NEK3-209ENST00000618856 PRMT1Q99873 361 aaKnown RBP8.58□□□□□ -1.04
NEK3-209ENST00000618856 TSPY26PQ9H489 355 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 CD248Q9HCU0 757 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 ARHGEF4Q9NR80 690 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 DEC1Q9P2X7 70 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 CLEC4EQ9ULY5 219 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 CAPN11Q9UMQ6 739 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 PCDHGA2Q9Y5H1 932 aa8.58□□□□□ -1.04
NEK3-209ENST00000618856 ZFHX2Q9C0A1 2572 aaPredicted RBP8.58□□□□□ -1.04
NEK3-209ENST00000618856 PRRT4C9JH25 899 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 I6L893 689 aaPredicted RBP8.57□□□□□ -1.04
NEK3-209ENST00000618856 CAPN9O14815 690 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 GYPCP04921 128 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 APODP05090 189 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 GZMAP12544 262 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 HNRNPLP14866 589 aaKnown RBP eCLIP8.57□□□□□ -1.04
NEK3-209ENST00000618856 HNRNPH3P31942 346 aaKnown RBP8.57□□□□□ -1.04
NEK3-209ENST00000618856 FLT3P36888 993 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 SLC11A2P49281 568 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 CXCR3P49682 368 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 SGSHP51688 502 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 ZBED6P86452 979 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 CDK17Q00537 523 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 CSTF1Q05048 431 aaKnown RBP8.57□□□□□ -1.04
NEK3-209ENST00000618856 C2CD6Q53TS8 623 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 MS4A13Q5J8X5 152 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 GRAMD4Q6IC98 578 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 SARM1Q6SZW1 724 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 MMS22LQ6ZRQ5 1243 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 TPGS1Q6ZTW0 290 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 ZNF571Q7Z3V5 609 aaPredicted RBP8.57□□□□□ -1.04
NEK3-209ENST00000618856 ZNF683Q8IZ20 524 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 CAMKK1Q8N5S9 505 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 NAT16Q8N8M0 369 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 IL17RCQ8NAC3 791 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 MSANTD4Q8NCY6 345 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 ADAM32Q8TC27 787 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 MYEOVQ96EZ4 313 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 BTN2A3PQ96KV6 586 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms