RNA–Protein interactions for RNA: ENST00000618778.4

GTDC1-220, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5 BASIC

Gene GTDC1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-220ENST00000618778 CCDC97Q96F63 343 aaPredicted RBP5.57□□□□□ -1.52
GTDC1-220ENST00000618778 PCED1BQ96HM7 432 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 SYT15Q9BQS2 421 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 CAPS2Q9BXY5 557 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 ZNF518BQ9C0D4 1074 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 TMBIM4Q9HC24 238 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 EPS15L1Q9UBC2 864 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 PCDHB4Q9Y5E5 795 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 CACNA1IQ9P0X4 2223 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 KRBA1A5PL33 1030 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 MYO1FO00160 1098 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 GDF9O60383 454 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 PPFIA2O75334 1257 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 BEST1O76090 585 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 ASS1P00966 412 aaKnown RBP5.57□□□□□ -1.52
GTDC1-220ENST00000618778 MYBL1P10243 752 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 HAPLN1P10915 354 aaPredicted RBP5.57□□□□□ -1.52
GTDC1-220ENST00000618778 HMGA1P17096 107 aaKnown RBP5.57□□□□□ -1.52
GTDC1-220ENST00000618778 WARSP23381 471 aaKnown RBP5.57□□□□□ -1.52
GTDC1-220ENST00000618778 BDNFP23560 247 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 TBXAS1P24557 533 aaPredicted RBP5.57□□□□□ -1.52
GTDC1-220ENST00000618778 GNA15P30679 374 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 ELF1P32519 619 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 COILP38432 576 aaPredicted RBP5.57□□□□□ -1.52
GTDC1-220ENST00000618778 PNPLA4P41247 253 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 VIPR2P41587 438 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 NSFP46459 744 aaKnown RBP5.57□□□□□ -1.52
GTDC1-220ENST00000618778 RPL21P46778 160 aaKnown RBP5.57□□□□□ -1.52
GTDC1-220ENST00000618778 PGFP49763 221 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 MMP16P51512 607 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 ZNF132P52740 706 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 ZNF844Q08AG5 666 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 PTP4A2Q12974 167 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 LLGL1Q15334 1064 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 DAB2IPQ5VWQ8 1189 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 TPGS2Q68CL5 300 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 TTC19Q6DKK2 380 aaPredicted RBP5.57□□□□□ -1.52
GTDC1-220ENST00000618778 TANGO2Q6ICL3 276 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 KDM7AQ6ZMT4 941 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 PASD1Q8IV76 773 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 RBBP8NLQ8NC74 664 aaPredicted RBP5.57□□□□□ -1.52
GTDC1-220ENST00000618778 FBXO25Q8TCJ0 367 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 UBLCP1Q8WVY7 318 aaPredicted RBP5.57□□□□□ -1.52
GTDC1-220ENST00000618778 ATP6V1G3Q96LB4 118 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 LRRC3BQ96PB8 259 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 SLC22A12Q96S37 553 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 TSPAN18Q96SJ8 248 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 FMO2Q99518 471 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 EPB41L4BQ9H329 900 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 LRRC4CQ9HCJ2 640 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 FAM49BQ9NUQ9 324 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 GRHL1Q9NZI5 618 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 CDH7Q9ULB5 785 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 CA14Q9ULX7 337 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 MAGED2Q9UNF1 606 aaPredicted RBP5.57□□□□□ -1.52
GTDC1-220ENST00000618778 USTQ9Y2C2 406 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 SNX24Q9Y343 169 aa5.57□□□□□ -1.52
GTDC1-220ENST00000618778 MRPS23Q9Y3D9 190 aaKnown RBP5.57□□□□□ -1.52
GTDC1-220ENST00000618778 DCHS1Q96JQ0 3298 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 TMEM221A6NGB7 291 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 SHISA7A6NL88 538 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 HMGB1P1B2RPK0 211 aaPredicted RBP5.56□□□□□ -1.52
GTDC1-220ENST00000618778 ANHXE9PGG2 379 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 M0R296 226 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 O00370 1275 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 SCAMP3O14828 347 aaKnown RBP5.56□□□□□ -1.52
GTDC1-220ENST00000618778 XYLBO75191 536 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 IVLP07476 585 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 CD58P19256 250 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 GABRR2P28476 465 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 KCNJ1P48048 391 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 RPIAP49247 311 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 ATP1A2P50993 1020 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 PLTPP55058 493 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 GNGT1P63211 74 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 IFRD2Q12894 506 aaPredicted RBP5.56□□□□□ -1.52
GTDC1-220ENST00000618778 MYO1EQ12965 1108 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 MAMLD1Q13495 774 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 TRPC3Q13507 836 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 FAM78AQ5JUQ0 283 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 SPDYCQ5MJ68 293 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 FAM171BQ6P995 826 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 TRIM72Q6ZMU5 477 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 PAQR9Q6ZVX9 377 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 PDZD4Q76G19 769 aaPredicted RBP5.56□□□□□ -1.52
GTDC1-220ENST00000618778 OTOP3Q7RTS5 596 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 GPRIN1Q7Z2K8 1008 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 ACOT1Q86TX2 421 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 METTL23Q86XA0 190 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 PHF13Q86YI8 300 aaPredicted RBP5.56□□□□□ -1.52
GTDC1-220ENST00000618778 C12orf29Q8N999 325 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 C12orf50Q8NA57 414 aaPredicted RBP5.56□□□□□ -1.52
GTDC1-220ENST00000618778 OR6B3Q8NGW1 331 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 ZNF606Q8WXB4 792 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 EDAQ92838 391 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 TRIM11Q96F44 468 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 VCPIP1Q96JH7 1222 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 ZFYVE19Q96K21 471 aa5.56□□□□□ -1.52
GTDC1-220ENST00000618778 USB1Q9BQ65 265 aaKnown RBP5.56□□□□□ -1.52
GTDC1-220ENST00000618778 C11orf70Q9BRQ4 267 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms