RNA–Protein interactions for RNA: ENST00000618449.4

CPEB1-216, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-216ENST00000618449 GDF10P55107 478 aa11.67□□□□□ -0.54
CPEB1-216ENST00000618449 EIF3EP60228 445 aaKnown RBP11.67□□□□□ -0.54
CPEB1-216ENST00000618449 IFT88Q13099 833 aa11.67□□□□□ -0.54
CPEB1-216ENST00000618449 STAT4Q14765 748 aa11.67□□□□□ -0.54
CPEB1-216ENST00000618449 SLC9A4Q6AI14 798 aa11.67□□□□□ -0.54
CPEB1-216ENST00000618449 C1orf228Q6PIY5 440 aa11.67□□□□□ -0.54
CPEB1-216ENST00000618449 C6orf89Q6UWU4 347 aa11.67□□□□□ -0.54
CPEB1-216ENST00000618449 RSPO2Q6UXX9 243 aaPredicted RBP11.67□□□□□ -0.54
CPEB1-216ENST00000618449 TAS1R1Q7RTX1 841 aa11.67□□□□□ -0.54
CPEB1-216ENST00000618449 PACS2Q86VP3 889 aa11.67□□□□□ -0.54
CPEB1-216ENST00000618449 SCML4Q8N228 414 aa11.67□□□□□ -0.54
CPEB1-216ENST00000618449 P3H4Q92791 437 aa11.67□□□□□ -0.54
CPEB1-216ENST00000618449 FUBP3Q96I24 572 aaKnown RBP eCLIP11.67□□□□□ -0.54
CPEB1-216ENST00000618449 SHOC2Q9UQ13 582 aa11.67□□□□□ -0.54
CPEB1-216ENST00000618449 TRIM43BA6NCK2 446 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 APOL1O14791 398 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 MCF2LO15068 1137 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 IFNB1P01574 187 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 RBP3P10745 1247 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 GPR15P49685 360 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 ARPP19P56211 112 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 NOMO1Q15155 1222 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 PKN2Q16513 984 aaKnown RBP11.66□□□□□ -0.54
CPEB1-216ENST00000618449 DDR2Q16832 855 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 RNASEH2BQ5TBB1 312 aaKnown RBP11.66□□□□□ -0.54
CPEB1-216ENST00000618449 GKAP1Q5VSY0 366 aaPredicted RBP11.66□□□□□ -0.54
CPEB1-216ENST00000618449 SDHAF4Q5VUM1 108 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 TMCO2Q7Z6W1 182 aaPredicted RBP11.66□□□□□ -0.54
CPEB1-216ENST00000618449 ATAD1Q8NBU5 361 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 STKLD1Q8NE28 680 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 TRIM43Q96BQ3 446 aaPredicted RBP11.66□□□□□ -0.54
CPEB1-216ENST00000618449 PRMT1Q99873 361 aaKnown RBP11.66□□□□□ -0.54
CPEB1-216ENST00000618449 CCDC77Q9BR77 488 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 WDR6Q9NNW5 1121 aaKnown RBP11.66□□□□□ -0.54
CPEB1-216ENST00000618449 PRDM5Q9NQX1 630 aaPredicted RBP11.66□□□□□ -0.54
CPEB1-216ENST00000618449 OR6C75A6NL08 312 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 ZNF487B1APH4 448 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 CDH16O75309 829 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 CPP00450 1065 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 CSF2RAP15509 400 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 GOT1P17174 413 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 RFC2P35250 354 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 IFNAR2P48551 515 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 ALDH7A1P49419 539 aaKnown RBP11.66□□□□□ -0.54
CPEB1-216ENST00000618449 ELAVL2Q12926 359 aaKnown RBP11.66□□□□□ -0.54
CPEB1-216ENST00000618449 RNF187Q5TA31 235 aaPredicted RBP11.66□□□□□ -0.54
CPEB1-216ENST00000618449 VSTM1Q6UX27 236 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 ZC3H18Q86VM9 953 aaKnown RBP11.66□□□□□ -0.54
CPEB1-216ENST00000618449 TTC9BQ8N6N2 239 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 PGAP3Q96FM1 320 aaPredicted RBP11.66□□□□□ -0.54
CPEB1-216ENST00000618449 TTC25Q96NG3 672 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 CSPG4P5Q96PW8 444 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 CWH43Q9H720 699 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 ANLNQ9NQW6 1124 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 DDIT4Q9NX09 232 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 DONSONQ9NYP3 566 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 PCDHB5Q9Y5E4 795 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 HEY1Q9Y5J3 304 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 PATJQ8NI35 1801 aa11.66□□□□□ -0.54
CPEB1-216ENST00000618449 TMEM120BA0PK00 339 aa11.65□□□□□ -0.54
CPEB1-216ENST00000618449 I6L893 689 aaPredicted RBP11.65□□□□□ -0.54
CPEB1-216ENST00000618449 KIF1CO43896 1103 aaKnown RBP11.65□□□□□ -0.54
CPEB1-216ENST00000618449 MAP3K6O95382 1288 aa11.65□□□□□ -0.54
CPEB1-216ENST00000618449 TIMP1P01033 207 aa11.65□□□□□ -0.54
CPEB1-216ENST00000618449 TGM2P21980 687 aa11.65□□□□□ -0.54
CPEB1-216ENST00000618449 PGFP49763 221 aa11.65□□□□□ -0.54
CPEB1-216ENST00000618449 PSTKQ8IV42 348 aaKnown RBP11.65□□□□□ -0.54
CPEB1-216ENST00000618449 UNC45BQ8IWX7 931 aa11.65□□□□□ -0.54
CPEB1-216ENST00000618449 LRRC34Q8IZ02 419 aa11.65□□□□□ -0.54
CPEB1-216ENST00000618449 MICALL1Q8N3F8 863 aa11.65□□□□□ -0.54
CPEB1-216ENST00000618449 TOP1MTQ969P6 601 aa11.65□□□□□ -0.54
CPEB1-216ENST00000618449 SLC9A7Q96T83 725 aa11.65□□□□□ -0.54
CPEB1-216ENST00000618449 TTPALQ9BTX7 342 aa11.65□□□□□ -0.54
CPEB1-216ENST00000618449 RRN3Q9NYV6 651 aa11.65□□□□□ -0.54
CPEB1-216ENST00000618449 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.65□□□□□ -0.54
CPEB1-216ENST00000618449 TBC1D4O60343 1298 aa11.65□□□□□ -0.54
CPEB1-216ENST00000618449 AMHP03971 560 aa11.65□□□□□ -0.54
CPEB1-216ENST00000618449 CPB1P15086 417 aa11.65□□□□□ -0.54
CPEB1-216ENST00000618449 CREB1P16220 341 aa11.65□□□□□ -0.54
CPEB1-216ENST00000618449 ADRA1BP35368 520 aa11.65□□□□□ -0.54
CPEB1-216ENST00000618449 YWHAGP61981 247 aaKnown RBP eCLIP11.65□□□□□ -0.54
CPEB1-216ENST00000618449 FASTKD3Q14CZ7 662 aaKnown RBP11.65□□□□□ -0.54
CPEB1-216ENST00000618449 FAM117BQ6P1L5 589 aa11.65□□□□□ -0.54
CPEB1-216ENST00000618449 PRSS55Q6UWB4 352 aaPredicted RBP11.65□□□□□ -0.54
CPEB1-216ENST00000618449 RIBC1Q8N443 379 aaPredicted RBP11.65□□□□□ -0.54
CPEB1-216ENST00000618449 FAM71DQ8N9W8 422 aa11.65□□□□□ -0.54
CPEB1-216ENST00000618449 MGARPQ8TDB4 240 aa11.65□□□□□ -0.54
CPEB1-216ENST00000618449 RSAD2Q8WXG1 361 aa11.65□□□□□ -0.54
CPEB1-216ENST00000618449 PRCCQ92733 491 aaPredicted RBP11.65□□□□□ -0.54
CPEB1-216ENST00000618449 CABS1Q96KC9 395 aa11.65□□□□□ -0.54
CPEB1-216ENST00000618449 C8orf48Q96LL4 319 aa11.65□□□□□ -0.54
CPEB1-216ENST00000618449 TBK1Q9UHD2 729 aa11.65□□□□□ -0.54
CPEB1-216ENST00000618449 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.65□□□□□ -0.54
CPEB1-216ENST00000618449 COL4A4P53420 1690 aaPredicted RBP11.65□□□□□ -0.55
CPEB1-216ENST00000618449 COL4A6Q14031 1691 aa11.65□□□□□ -0.55
CPEB1-216ENST00000618449 ABHD14A-ACY1A0A1B0GW23 586 aa11.64□□□□□ -0.55
CPEB1-216ENST00000618449 EXOC1LA0A1B0GW35 172 aa11.64□□□□□ -0.55
CPEB1-216ENST00000618449 FOXO6A8MYZ6 492 aa11.64□□□□□ -0.55
CPEB1-216ENST00000618449 AMPD1P23109 780 aa11.64□□□□□ -0.55
CPEB1-216ENST00000618449 ARL4AP40617 200 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms