RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 ITM2CQ9NQX7 267 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 NCKIPSDQ9NZQ3 722 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 AGTPBP1Q9UPW5 1226 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 XRCC1P18887 633 aaPredicted RBP12.61□□□□□ -0.39
MATR3-227ENST00000618441 NFIXQ14938 502 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 SIX1Q15475 284 aaPredicted RBP12.61□□□□□ -0.39
MATR3-227ENST00000618441 TAF5Q15542 800 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 Q3C1V9 767 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 TXNRD3Q86VQ6 643 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 OFCC1Q8IZS5 231 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 LZTR1Q8N653 840 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 ELMO1Q92556 727 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 ITPKCQ96DU7 683 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 PCDHB18PQ96TA0 734 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 SMARCAD1Q9H4L7 1026 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 SEPT10Q9P0V9 454 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 AURKCQ9UQB9 309 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 AKAP10O43572 662 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 DENRO43583 198 aaKnown RBP12.61□□□□□ -0.39
MATR3-227ENST00000618441 TCEA3O75764 348 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 CRYZL1O95825 349 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 TMEM191BP0C7N4 346 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 GLRA2P23416 452 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 SLC9A4Q6AI14 798 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 LAYNQ6UX15 382 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 ZBTB49Q6ZSB9 765 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 CDHR3Q6ZTQ4 885 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 IGFN1Q86VF2 1251 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 RALGPS2Q86X27 583 aaPredicted RBP12.61□□□□□ -0.39
MATR3-227ENST00000618441 PLPP6Q8IY26 295 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 NATD1Q8N6N6 113 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 OR7G1Q8NGA0 311 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 CMTM5Q96DZ9 223 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 OTUD5Q96G74 571 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 KCTD10Q9H3F6 313 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 PTPRHQ9HD43 1115 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 FIS1Q9Y3D6 152 aa12.61□□□□□ -0.39
MATR3-227ENST00000618441 ATP6V1E1P36543 226 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 TRIM25Q14258 630 aaKnown RBP12.6□□□□□ -0.39
MATR3-227ENST00000618441 KLHL38Q2WGJ6 581 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 SLC10A5Q5PT55 438 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 SLC30A10Q6XR72 485 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 GPR180Q86V85 440 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 CCDC103Q8IW40 242 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 PDIK1LQ8N165 341 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 APPL2Q8NEU8 664 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 RSAD2Q8WXG1 361 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 NACC2Q96BF6 587 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 BBS2Q9BXC9 721 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 KLC2Q9H0B6 622 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 AP4E1Q9UPM8 1137 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 DNM3Q9UQ16 869 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 KLHL2O95198 593 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 KRT1P04264 644 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 KRT3P12035 628 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 PSMC6P62333 389 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 CLCQ05315 142 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 ADGRE1Q14246 886 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 SCARA3Q6AZY7 606 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 KYAT3Q6YP21 454 aaKnown RBP12.6□□□□□ -0.39
MATR3-227ENST00000618441 BTLAQ7Z6A9 289 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 PHTF2Q8N3S3 785 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 ZCCHC7Q8N3Z6 543 aaKnown RBP12.6□□□□□ -0.39
MATR3-227ENST00000618441 BANPQ8N9N5 519 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 TBC1D15Q8TC07 691 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 FERD3LQ96RJ6 166 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 REEP2Q9BRK0 252 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 CLK4Q9HAZ1 481 aaKnown RBP12.6□□□□□ -0.39
MATR3-227ENST00000618441 ABCB10Q9NRK6 738 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 PNPOQ9NVS9 261 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 SLC24A2Q9UI40 661 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 BOLA1Q9Y3E2 137 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 PHRF1Q9P1Y6 1649 aaKnown RBP12.6□□□□□ -0.39
MATR3-227ENST00000618441 A0A087WXM4 84 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 GOLGA8JA6NMD2 632 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 PLOD2O00469 737 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 AURKAO14965 403 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 ASNA1O43681 348 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 DAB1O75553 588 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 FARP2O94887 1054 aaPredicted RBP12.6□□□□□ -0.39
MATR3-227ENST00000618441 TPD52P55327 224 aaPredicted RBP12.6□□□□□ -0.39
MATR3-227ENST00000618441 TUBA1BP68363 451 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 FSTL1Q12841 308 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 SPDYAQ5MJ70 313 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 OGFRL1Q5TC84 451 aaPredicted RBP12.6□□□□□ -0.39
MATR3-227ENST00000618441 TUBA1AQ71U36 451 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 ELMOD2Q8IZ81 293 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 LILRB4Q8NHJ6 448 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 FIG4Q92562 907 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 VCPIP1Q96JH7 1222 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 DMRTB1Q96MA1 342 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 BIRC8Q96P09 236 aa12.6□□□□□ -0.39
MATR3-227ENST00000618441 F5H423 210 aaPredicted RBP12.59□□□□□ -0.39
MATR3-227ENST00000618441 FSCN2O14926 492 aa12.59□□□□□ -0.39
MATR3-227ENST00000618441 NTSR2O95665 410 aa12.59□□□□□ -0.39
MATR3-227ENST00000618441 SERPINA6P08185 405 aa12.59□□□□□ -0.39
MATR3-227ENST00000618441 CCDC159P0C7I6 412 aa12.59□□□□□ -0.39
MATR3-227ENST00000618441 ITGAXP20702 1163 aa12.59□□□□□ -0.39
MATR3-227ENST00000618441 NEK5Q6P3R8 708 aa12.59□□□□□ -0.39
MATR3-227ENST00000618441 ARHGEF19Q8IW93 802 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms