RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 ALDH1A3P47895 512 aa17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 NR2C2P49116 596 aa17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 KPNA1P52294 538 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 CACNA2D1P54289 1103 aa17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 VCPP55072 806 aaKnown RBP17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 DYNLT1P63172 113 aa17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 PLD1Q13393 1074 aa17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 MTMR3Q13615 1198 aa17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 DPYSL3Q14195 570 aa17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 SIX1Q15475 284 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 SH3PXD2AQ5TCZ1 1133 aa17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 GPRIN1Q7Z2K8 1008 aa17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 FAM131BQ86XD5 332 aa17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 GOLGA6L1Q8N7Z2 621 aa17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 HDAC7Q8WUI4 952 aa17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 NKD2Q969F2 451 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 FBXO32Q969P5 355 aa17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 ACSF2Q96CM8 615 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 RUFY1Q96T51 708 aa17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 DONSONQ9NYP3 566 aa17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 HCSTQ9UBK5 93 aa17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 FZD10Q9ULW2 581 aa17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 SYNJ2BP-COX16A0A087WUM0 186 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 TCRBV7S2A1N4TA0A589 114 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 C3orf70A6NLC5 250 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 TNFRSF10BO14763 440 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 ZMYND10O75800 440 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 GLP2RO95838 553 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 STIP1P31948 543 aaKnown RBP17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 OR1D2P34982 312 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 PBX3P40426 434 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 NRIP1P48552 1158 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 PTK6Q13882 451 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 LLGL1Q15334 1064 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 ANKRD20A8PQ5CZ79 823 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 DUPD1Q68J44 220 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 TXNRD3NBQ6F5E7 133 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 PRSS55Q6UWB4 352 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 C4orf22Q6V702 233 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 PCGF5Q86SE9 256 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 RBM23Q86U06 439 aaKnown RBP17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 FAM71BQ8TC56 605 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 OVCA2Q8WZ82 227 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 CAVIN3Q969G5 261 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 SNF8Q96H20 258 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 PEBP4Q96S96 227 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 EPAS1Q99814 870 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 VIPAS39Q9H9C1 493 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 CLIC5Q9NZA1 410 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 COX16Q9P0S2 106 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 FBXW11Q9UKB1 542 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 NFU1Q9UMS0 254 aa17.39■□□□□ 0.37
TRAPPC3-210ENST00000617904 SGK1O00141 431 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 CSH1P0DML2 217 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 CSH2P0DML3 217 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 L1CAMP32004 1257 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 CCR1P32246 355 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 ADRA1BP35368 520 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 ADCY8P40145 1251 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 PTGIRP43119 386 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 EIF3EP60228 445 aaKnown RBP17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 ROR1Q01973 937 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 UBE3AQ05086 875 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 SCAPQ12770 1279 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 DDR2Q16832 855 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 BEND6Q5SZJ8 279 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 SYPL2Q5VXT5 272 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 RNF19BQ6ZMZ0 732 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 CDKL3Q8IVW4 592 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 RNF168Q8IYW5 571 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 ATAD1Q8NBU5 361 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 SMRP1Q8NCR6 262 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 STKLD1Q8NE28 680 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 ZNF461Q8TAF7 563 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 CASKIN2Q8WXE0 1202 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 SEC14L1Q92503 715 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 NDRG1Q92597 394 aaKnown RBP17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 EDEM1Q92611 657 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 FMO2Q99518 471 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 FOXP3Q9BZS1 431 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 DPH5Q9H2P9 285 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 SMOC2Q9H3U7 446 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 WHRNQ9P202 907 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 FNIP2Q9P278 1114 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 UXTQ9UBK9 157 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 NR2E1Q9Y466 385 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 RAD54BQ9Y620 910 aa17.38■□□□□ 0.37
TRAPPC3-210ENST00000617904 H7C0C1 242 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 SMAPO00193 183 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 EEF2KO00418 725 aaKnown RBP17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 C2CD2LO14523 706 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 PRRG1O14668 218 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 FGF18O76093 207 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 STK10O94804 968 aaKnown RBP17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 KRT14P02533 472 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 CA8P35219 290 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 ATP5OP48047 213 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 PPP3CCP48454 512 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 HCAR3P49019 387 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 CXCR3P49682 368 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms