RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 C11orf74Q86VG3 221 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 NEDD1Q8NHV4 660 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 UTP15Q8TED0 518 aaKnown RBP14.1□□□□□ -0.15
CHD1-212ENST00000614616 DCUN1D1Q96GG9 259 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 NFKBIL1Q9UBC1 381 aaPredicted RBP14.1□□□□□ -0.15
CHD1-212ENST00000614616 DRG2P55039 364 aaKnown RBP14.1□□□□□ -0.15
CHD1-212ENST00000614616 RTP1P59025 263 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 CDC73Q6P1J9 531 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 LRRC71Q8N4P6 559 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 ATPAF2Q8N5M1 289 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 RGS18Q9NS28 235 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 CCDC167Q9P0B6 97 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 SPATA7Q9P0W8 599 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 RARAP10276 462 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 PTPN7P35236 360 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 SLC16A1P53985 500 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 TTI2Q6NXR4 508 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 EMC1Q8N766 993 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 OR8H1Q8NGG4 311 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 RNASE11Q8TAA1 199 aaKnown RBP14.09□□□□□ -0.15
CHD1-212ENST00000614616 POP5Q969H6 163 aaKnown RBP14.09□□□□□ -0.15
CHD1-212ENST00000614616 AGO2Q9UKV8 859 aaKnown RBP14.09□□□□□ -0.15
CHD1-212ENST00000614616 ARHGEF33A8MVX0 844 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 PSMD11O00231 422 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 ZNF806P0C7X5 589 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 MTM1Q13496 603 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 RRP1BQ14684 758 aaKnown RBP14.09□□□□□ -0.15
CHD1-212ENST00000614616 MEA1Q16626 185 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 CLEC16AQ2KHT3 1053 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 ANKS3Q6ZW76 656 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 SHROOM3Q8TF72 1996 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 REEP2Q9BRK0 252 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 PREBQ9HCU5 417 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 ARHGAP20Q9P2F6 1191 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 EFR3BQ9Y2G0 817 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 FADS3Q9Y5Q0 445 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 ITGA2BP08514 1039 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 TSPAN19P0C672 248 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 SFNP31947 248 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 FXR2P51116 673 aaKnown RBP eCLIP14.09□□□□□ -0.153e-7■■■■□ 20.5
CHD1-212ENST00000614616 PIWIL2Q8TC59 973 aaKnown RBP14.09□□□□□ -0.15
CHD1-212ENST00000614616 ZNF669Q96BR6 464 aaPredicted RBP14.09□□□□□ -0.15
CHD1-212ENST00000614616 FAM193BQ96PV7 902 aaPredicted RBP14.09□□□□□ -0.15
CHD1-212ENST00000614616 ASS1P00966 412 aaKnown RBP14.09□□□□□ -0.15
CHD1-212ENST00000614616 TPBGLP0DKB5 382 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 FBXW4P57775 412 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 DDB1Q16531 1140 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 KLHDC10Q6PID8 442 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 CASP12Q6UXS9 341 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 C12orf56Q8IXR9 622 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 IZUMO1Q8IYV9 350 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 PIF1Q9H611 641 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 PCDH18Q9HCL0 1135 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 C3orf18Q9UK00 162 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 CDH9Q9ULB4 789 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 IFNA16P05015 189 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 GRIA3P42263 894 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 INO80DQ53TQ3 878 aaPredicted RBP14.09□□□□□ -0.15
CHD1-212ENST00000614616 NIPAL1Q6NVV3 410 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 ARCQ7LC44 396 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 ZNF276Q8N554 614 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 MTMR8Q96EF0 704 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 RNF38Q9H0F5 515 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 FMN2Q9NZ56 1722 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.09□□□□□ -0.15
CHD1-212ENST00000614616 STX11O75558 287 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 IFNA14P01570 189 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 ABHD2P08910 425 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 SLC9A3P48764 834 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 ZNF568Q3ZCX4 644 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 TRAPPC3LQ5T215 181 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 FIG4Q92562 907 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 ZFP42Q96MM3 310 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 FAM49BQ9NUQ9 324 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 SLC5A4Q9NY91 659 aa14.09□□□□□ -0.15
CHD1-212ENST00000614616 APOL3O95236 402 aa14.08□□□□□ -0.15
CHD1-212ENST00000614616 CYP19A1P11511 503 aaPredicted RBP14.08□□□□□ -0.15
CHD1-212ENST00000614616 ALDH6A1Q02252 535 aaKnown RBP14.08□□□□□ -0.15
CHD1-212ENST00000614616 FAM228AQ86W67 206 aa14.08□□□□□ -0.15
CHD1-212ENST00000614616 EPHX4Q8IUS5 362 aa14.08□□□□□ -0.15
CHD1-212ENST00000614616 BPIFB6Q8NFQ5 453 aa14.08□□□□□ -0.15
CHD1-212ENST00000614616 GPRC5DQ9NZD1 345 aa14.08□□□□□ -0.15
CHD1-212ENST00000614616 UBE2QL1A1L167 161 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 ITGA4P13612 1032 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 RIPPLY1Q0D2K3 151 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 NCOA4Q13772 614 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 NAPEPLDQ6IQ20 393 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 SNX32Q86XE0 403 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 FAM13CQ8NE31 585 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 TBC1D22BQ9NU19 505 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 TSR3Q9UJK0 312 aaKnown RBP14.08□□□□□ -0.16
CHD1-212ENST00000614616 SUPT7LO94864 414 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 ASLP04424 464 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 SRP54P61011 504 aaKnown RBP14.08□□□□□ -0.16
CHD1-212ENST00000614616 N4BP2L1Q5TBK1 243 aaPredicted RBP14.08□□□□□ -0.16
CHD1-212ENST00000614616 TMEM121Q9BTD3 319 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 PARNO95453 639 aaKnown RBP14.08□□□□□ -0.16
CHD1-212ENST00000614616 MAPK1P28482 360 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 PTGER2P43116 358 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 NME5P56597 212 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms