RNA–Protein interactions for RNA: ENST00000613177.1

TARDBP-214, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-214ENST00000613177 TNFRSF13BO14836 293 aaPredicted RBP4.38□□□□□ -1.71
TARDBP-214ENST00000613177 MT-ND5P03915 603 aa4.38□□□□□ -1.71
TARDBP-214ENST00000613177 MYF5P13349 255 aa4.38□□□□□ -1.71
TARDBP-214ENST00000613177 POLD3Q15054 466 aaPredicted RBP4.38□□□□□ -1.71
TARDBP-214ENST00000613177 CXorf57Q6NSI4 855 aaKnown RBP4.38□□□□□ -1.71
TARDBP-214ENST00000613177 ARL14EPQ8N8R7 260 aaPredicted RBP4.38□□□□□ -1.71
TARDBP-214ENST00000613177 NUDCD2Q8WVJ2 157 aa4.38□□□□□ -1.71
TARDBP-214ENST00000613177 IPCEF1Q8WWN9 437 aaPredicted RBP4.38□□□□□ -1.71
TARDBP-214ENST00000613177 OIT3Q8WWZ8 545 aa4.38□□□□□ -1.71
TARDBP-214ENST00000613177 LRTOMTQ8WZ04 291 aa4.38□□□□□ -1.71
TARDBP-214ENST00000613177 WDR83Q9BRX9 315 aaKnown RBP4.38□□□□□ -1.71
TARDBP-214ENST00000613177 LRRC27Q9C0I9 530 aa4.38□□□□□ -1.71
TARDBP-214ENST00000613177 SLC25A32Q9H2D1 315 aa4.38□□□□□ -1.71
TARDBP-214ENST00000613177 ZNF287Q9HBT7 754 aa4.38□□□□□ -1.71
TARDBP-214ENST00000613177 CD93Q9NPY3 652 aa4.38□□□□□ -1.71
TARDBP-214ENST00000613177 GJB4Q9NTQ9 266 aa4.38□□□□□ -1.71
TARDBP-214ENST00000613177 VPS4AQ9UN37 437 aa4.38□□□□□ -1.71
TARDBP-214ENST00000613177 ACOT8O14734 319 aa4.37□□□□□ -1.71
TARDBP-214ENST00000613177 WNT1P04628 370 aa4.37□□□□□ -1.71
TARDBP-214ENST00000613177 CACNB3P54284 484 aa4.37□□□□□ -1.71
TARDBP-214ENST00000613177 EGR4Q05215 589 aa4.37□□□□□ -1.71
TARDBP-214ENST00000613177 DGKKQ5KSL6 1271 aa4.37□□□□□ -1.71
TARDBP-214ENST00000613177 C9orf50Q5SZB4 431 aa4.37□□□□□ -1.71
TARDBP-214ENST00000613177 FAM90A2PQ658T7 463 aa4.37□□□□□ -1.71
TARDBP-214ENST00000613177 KYAT3Q6YP21 454 aaKnown RBP4.37□□□□□ -1.71
TARDBP-214ENST00000613177 ZFPM2Q8WW38 1151 aa4.37□□□□□ -1.71
TARDBP-214ENST00000613177 MED30Q96HR3 178 aa4.37□□□□□ -1.71
TARDBP-214ENST00000613177 ZNF845Q96IR2 970 aaPredicted RBP4.37□□□□□ -1.71
TARDBP-214ENST00000613177 LMLNQ96KR4 655 aa4.37□□□□□ -1.71
TARDBP-214ENST00000613177 RXFP3Q9NSD7 469 aa4.37□□□□□ -1.71
TARDBP-214ENST00000613177 C1orf112Q9NSG2 853 aa4.37□□□□□ -1.71
TARDBP-214ENST00000613177 ZNF212Q9UDV6 495 aa4.37□□□□□ -1.71
TARDBP-214ENST00000613177 TCF20Q9UGU0 1960 aaKnown RBP4.36□□□□□ -1.71
TARDBP-214ENST00000613177 TTC34A8MYJ7 566 aa4.36□□□□□ -1.71
TARDBP-214ENST00000613177 H0YGN5 161 aa4.36□□□□□ -1.71
TARDBP-214ENST00000613177 IL18RAPO95256 599 aa4.36□□□□□ -1.71
TARDBP-214ENST00000613177 SGPL1O95470 568 aa4.36□□□□□ -1.71
TARDBP-214ENST00000613177 ARP10275 920 aa4.36□□□□□ -1.71
TARDBP-214ENST00000613177 CHRNB1P11230 501 aa4.36□□□□□ -1.71
TARDBP-214ENST00000613177 MATN1P21941 496 aa4.36□□□□□ -1.71
TARDBP-214ENST00000613177 YY1P25490 414 aa4.36□□□□□ -1.71
TARDBP-214ENST00000613177 EPHB1P54762 984 aa4.36□□□□□ -1.71
TARDBP-214ENST00000613177 DMWDQ09019 674 aa4.36□□□□□ -1.71
TARDBP-214ENST00000613177 C6orf10Q5SRN2 563 aa4.36□□□□□ -1.71
TARDBP-214ENST00000613177 ZNF474Q6S9Z5 364 aaPredicted RBP4.36□□□□□ -1.71
TARDBP-214ENST00000613177 GSG1LQ6UXU4 331 aa4.36□□□□□ -1.71
TARDBP-214ENST00000613177 CUZD1Q86UP6 607 aa4.36□□□□□ -1.71
TARDBP-214ENST00000613177 SKAP1Q86WV1 359 aa4.36□□□□□ -1.71
TARDBP-214ENST00000613177 RHPN2Q8IUC4 686 aa4.36□□□□□ -1.71
TARDBP-214ENST00000613177 DNASE2BQ8WZ79 361 aa4.36□□□□□ -1.71
TARDBP-214ENST00000613177 KAT2BQ92831 832 aa4.36□□□□□ -1.71
TARDBP-214ENST00000613177 SNX22Q96L94 193 aa4.36□□□□□ -1.71
TARDBP-214ENST00000613177 FAM204AQ9H8W3 233 aa4.36□□□□□ -1.71
TARDBP-214ENST00000613177 A0A087WZ62 844 aa4.35□□□□□ -1.71
TARDBP-214ENST00000613177 PODXLO00592 558 aa4.35□□□□□ -1.71
TARDBP-214ENST00000613177 MAP4K4O95819 1239 aaPredicted RBP4.35□□□□□ -1.71
TARDBP-214ENST00000613177 IGHMBP2P38935 993 aaKnown RBP4.35□□□□□ -1.71
TARDBP-214ENST00000613177 MLH1P40692 756 aa4.35□□□□□ -1.71
TARDBP-214ENST00000613177 NFATC4Q14934 902 aa4.35□□□□□ -1.71
TARDBP-214ENST00000613177 RNF220Q5VTB9 566 aa4.35□□□□□ -1.71
TARDBP-214ENST00000613177 ABLIM2Q6H8Q1 611 aa4.35□□□□□ -1.71
TARDBP-214ENST00000613177 SDR16C5Q8N3Y7 309 aa4.35□□□□□ -1.71
TARDBP-214ENST00000613177 ASB12Q8WXK4 309 aa4.35□□□□□ -1.71
TARDBP-214ENST00000613177 NR4A3Q92570 626 aa4.35□□□□□ -1.71
TARDBP-214ENST00000613177 LPAR1Q92633 364 aa4.35□□□□□ -1.71
TARDBP-214ENST00000613177 INPP5DQ92835 1189 aa4.35□□□□□ -1.71
TARDBP-214ENST00000613177 ERVK-5Q9HDB9 667 aa4.35□□□□□ -1.71
TARDBP-214ENST00000613177 UTS2RQ9UKP6 389 aa4.35□□□□□ -1.71
TARDBP-214ENST00000613177 EMSYQ7Z589 1322 aa4.35□□□□□ -1.71
TARDBP-214ENST00000613177 A0A087WYN8 130 aa4.34□□□□□ -1.71
TARDBP-214ENST00000613177 IFNA2P01563 188 aa4.34□□□□□ -1.71
TARDBP-214ENST00000613177 HRGP04196 525 aa4.34□□□□□ -1.71
TARDBP-214ENST00000613177 ENO1P06733 434 aaKnown RBP4.34□□□□□ -1.71
TARDBP-214ENST00000613177 STAT6P42226 847 aa4.34□□□□□ -1.71
TARDBP-214ENST00000613177 RFX2P48378 723 aa4.34□□□□□ -1.71
TARDBP-214ENST00000613177 SLC4A8Q2Y0W8 1093 aa4.34□□□□□ -1.71
TARDBP-214ENST00000613177 ISM2Q6H9L7 571 aa4.34□□□□□ -1.71
TARDBP-214ENST00000613177 TRILQ7L0X0 811 aa4.34□□□□□ -1.71
TARDBP-214ENST00000613177 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.34□□□□□ -1.71
TARDBP-214ENST00000613177 DDIASQ8IXT1 998 aa4.34□□□□□ -1.71
TARDBP-214ENST00000613177 OR52L2PQ8NGH6 319 aa4.34□□□□□ -1.71
TARDBP-214ENST00000613177 ELP5Q8TE02 316 aa4.34□□□□□ -1.71
TARDBP-214ENST00000613177 TMEM174Q8WUU8 243 aa4.34□□□□□ -1.71
TARDBP-214ENST00000613177 SF3B5Q9BWJ5 86 aaKnown RBP4.34□□□□□ -1.71
TARDBP-214ENST00000613177 AAMDCQ9H7C9 122 aa4.34□□□□□ -1.71
TARDBP-214ENST00000613177 WNT16Q9UBV4 365 aa4.34□□□□□ -1.71
TARDBP-214ENST00000613177 CLEC18AA5D8T8 446 aa4.33□□□□□ -1.72
TARDBP-214ENST00000613177 F8W8V4 182 aa4.33□□□□□ -1.72
TARDBP-214ENST00000613177 SLC3A2P08195 630 aaKnown RBP4.33□□□□□ -1.72
TARDBP-214ENST00000613177 U2AF1L5P0DN76 240 aaPredicted RBP4.33□□□□□ -1.72
TARDBP-214ENST00000613177 KRT10P13645 584 aa4.33□□□□□ -1.72
TARDBP-214ENST00000613177 AKR1A1P14550 325 aa4.33□□□□□ -1.72
TARDBP-214ENST00000613177 DRD1P21728 446 aa4.33□□□□□ -1.72
TARDBP-214ENST00000613177 ATICP31939 592 aa4.33□□□□□ -1.72
TARDBP-214ENST00000613177 AGTR2P50052 363 aa4.33□□□□□ -1.72
TARDBP-214ENST00000613177 U2AF1Q01081 240 aaKnown RBP eCLIP4.33□□□□□ -1.72
TARDBP-214ENST00000613177 MINDY4Q4G0A6 757 aa4.33□□□□□ -1.72
TARDBP-214ENST00000613177 FAM102BQ5T8I3 360 aa4.33□□□□□ -1.72
TARDBP-214ENST00000613177 LIPMQ5VYY2 423 aa4.33□□□□□ -1.72
TARDBP-214ENST00000613177 KRT28Q7Z3Y7 464 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms