RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 EIF2S3P41091 472 aaKnown RBP18.03■□□□□ 0.48
CSNK1E-215ENST00000612795 CTSKP43235 329 aa18.03■□□□□ 0.48
CSNK1E-215ENST00000612795 CAMK2GQ13555 558 aaPredicted RBP18.03■□□□□ 0.48
CSNK1E-215ENST00000612795 SGSM1Q2NKQ1 1148 aa18.03■□□□□ 0.48
CSNK1E-215ENST00000612795 TTC31Q49AM3 519 aaPredicted RBP18.03■□□□□ 0.48
CSNK1E-215ENST00000612795 TMEM215Q68D42 235 aa18.03■□□□□ 0.48
CSNK1E-215ENST00000612795 CCDC186Q7Z3E2 898 aa18.03■□□□□ 0.48
CSNK1E-215ENST00000612795 ZNF366Q8N895 744 aa18.03■□□□□ 0.48
CSNK1E-215ENST00000612795 PLEKHO2Q8TD55 490 aa18.03■□□□□ 0.48
CSNK1E-215ENST00000612795 PARD3BQ8TEW8 1205 aa18.03■□□□□ 0.48
CSNK1E-215ENST00000612795 BAP1Q92560 729 aa18.03■□□□□ 0.48
CSNK1E-215ENST00000612795 CYFIP2Q96F07 1278 aa18.03■□□□□ 0.48
CSNK1E-215ENST00000612795 HNRNPABQ99729 332 aaKnown RBP18.03■□□□□ 0.48
CSNK1E-215ENST00000612795 CUEDC2Q9H467 287 aa18.03■□□□□ 0.48
CSNK1E-215ENST00000612795 KBTBD4Q9NVX7 518 aa18.03■□□□□ 0.48
CSNK1E-215ENST00000612795 CLIC5Q9NZA1 410 aa18.03■□□□□ 0.48
CSNK1E-215ENST00000612795 TFIP11Q9UBB9 837 aaKnown RBP18.03■□□□□ 0.48
CSNK1E-215ENST00000612795 AGO1Q9UL18 857 aaKnown RBP18.03■□□□□ 0.48
CSNK1E-215ENST00000612795 PCDHGA1Q9Y5H4 931 aa18.03■□□□□ 0.48
CSNK1E-215ENST00000612795 ENC1O14682 589 aa18.02■□□□□ 0.48
CSNK1E-215ENST00000612795 TLX3O43711 291 aaPredicted RBP18.02■□□□□ 0.48
CSNK1E-215ENST00000612795 RFPL3O75679 317 aa18.02■□□□□ 0.48
CSNK1E-215ENST00000612795 KIF11P52732 1056 aa18.02■□□□□ 0.48
CSNK1E-215ENST00000612795 CLDN6P56747 220 aa18.02■□□□□ 0.48
CSNK1E-215ENST00000612795 RSRC2Q7L4I2 434 aaKnown RBP18.02■□□□□ 0.48
CSNK1E-215ENST00000612795 SCD5Q86SK9 330 aa18.02■□□□□ 0.48
CSNK1E-215ENST00000612795 GATAD2AQ86YP4 633 aa18.02■□□□□ 0.48
CSNK1E-215ENST00000612795 CPXM2Q8N436 756 aa18.02■□□□□ 0.48
CSNK1E-215ENST00000612795 ZNF276Q8N554 614 aa18.02■□□□□ 0.48
CSNK1E-215ENST00000612795 RBBP8NLQ8NC74 664 aaPredicted RBP18.02■□□□□ 0.48
CSNK1E-215ENST00000612795 LSM14AQ8ND56 463 aaKnown RBP18.02■□□□□ 0.48
CSNK1E-215ENST00000612795 DHX58Q96C10 678 aa18.02■□□□□ 0.48
CSNK1E-215ENST00000612795 ACE2Q9BYF1 805 aaPredicted RBP18.02■□□□□ 0.48
CSNK1E-215ENST00000612795 FBRSQ9HAH7 460 aa18.02■□□□□ 0.48
CSNK1E-215ENST00000612795 STRIP2Q9ULQ0 834 aa18.02■□□□□ 0.48
CSNK1E-215ENST00000612795 PAPSS1O43252 624 aaPredicted RBP18.01■□□□□ 0.47
CSNK1E-215ENST00000612795 TSPAN3O60637 253 aa18.01■□□□□ 0.47
CSNK1E-215ENST00000612795 ABCB4P21439 1286 aa18.01■□□□□ 0.47
CSNK1E-215ENST00000612795 PIK3CAP42336 1068 aa18.01■□□□□ 0.47
CSNK1E-215ENST00000612795 ASPAP45381 313 aa18.01■□□□□ 0.47
CSNK1E-215ENST00000612795 SLC39A14Q15043 492 aa18.01■□□□□ 0.47
CSNK1E-215ENST00000612795 E2F4Q16254 413 aa18.01■□□□□ 0.47
CSNK1E-215ENST00000612795 C8orf34Q49A92 452 aa18.01■□□□□ 0.47
CSNK1E-215ENST00000612795 KCNT1Q5JUK3 1230 aa18.01■□□□□ 0.47
CSNK1E-215ENST00000612795 SPOPLQ6IQ16 392 aa18.01■□□□□ 0.47
CSNK1E-215ENST00000612795 UNC13DQ70J99 1090 aa18.01■□□□□ 0.47
CSNK1E-215ENST00000612795 CYB5D2Q8WUJ1 264 aa18.01■□□□□ 0.47
CSNK1E-215ENST00000612795 TAF4BQ92750 862 aa18.01■□□□□ 0.47
CSNK1E-215ENST00000612795 CNDP2Q96KP4 475 aaKnown RBP18.01■□□□□ 0.47
CSNK1E-215ENST00000612795 TWNKQ96RR1 684 aa18.01■□□□□ 0.47
CSNK1E-215ENST00000612795 USP28Q96RU2 1077 aa18.01■□□□□ 0.47
CSNK1E-215ENST00000612795 NT5C1AQ9BXI3 368 aa18.01■□□□□ 0.47
CSNK1E-215ENST00000612795 SGK2Q9HBY8 427 aa18.01■□□□□ 0.47
CSNK1E-215ENST00000612795 PLA2G4CQ9UP65 541 aa18.01■□□□□ 0.47
CSNK1E-215ENST00000612795 RAI2Q9Y5P3 530 aa18.01■□□□□ 0.47
CSNK1E-215ENST00000612795 MORC2Q9Y6X9 1032 aaPredicted RBP18.01■□□□□ 0.47
CSNK1E-215ENST00000612795 KALRNO60229 2985 aa18.01■□□□□ 0.47
CSNK1E-215ENST00000612795 A0A1B0GTQ1 180 aa18■□□□□ 0.47
CSNK1E-215ENST00000612795 SLC12A8A0AV02 714 aa18■□□□□ 0.47
CSNK1E-215ENST00000612795 CBX4O00257 560 aa18■□□□□ 0.47
CSNK1E-215ENST00000612795 LDOC1O95751 146 aaPredicted RBP18■□□□□ 0.47
CSNK1E-215ENST00000612795 RPN1P04843 607 aaKnown RBP18■□□□□ 0.47
CSNK1E-215ENST00000612795 CDK4P11802 303 aa18■□□□□ 0.47
CSNK1E-215ENST00000612795 RPS14P62263 151 aaKnown RBP18■□□□□ 0.47
CSNK1E-215ENST00000612795 CLDN10P78369 228 aa18■□□□□ 0.47
CSNK1E-215ENST00000612795 ZBTB16Q05516 673 aa18■□□□□ 0.47
CSNK1E-215ENST00000612795 DNAJC3Q13217 504 aa18■□□□□ 0.47
CSNK1E-215ENST00000612795 KNOP1Q1ED39 458 aaKnown RBP18■□□□□ 0.47
CSNK1E-215ENST00000612795 GOLGA5Q8TBA6 731 aa18■□□□□ 0.47
CSNK1E-215ENST00000612795 WFIKKN2Q8TEU8 576 aa18■□□□□ 0.47
CSNK1E-215ENST00000612795 SKA1Q96BD8 255 aa18■□□□□ 0.47
CSNK1E-215ENST00000612795 DNAI2Q9GZS0 605 aa18■□□□□ 0.47
CSNK1E-215ENST00000612795 TMEM245Q9H330 911 aa18■□□□□ 0.47
CSNK1E-215ENST00000612795 SLC39A2Q9NP94 309 aa18■□□□□ 0.47
CSNK1E-215ENST00000612795 MARCH2Q9P0N8 246 aa18■□□□□ 0.47
CSNK1E-215ENST00000612795 TEX51A0A1B0GUA7 166 aa17.99■□□□□ 0.47
CSNK1E-215ENST00000612795 FAM47DPA6NHR8 397 aa17.99■□□□□ 0.47
CSNK1E-215ENST00000612795 ASS1P00966 412 aaKnown RBP17.99■□□□□ 0.47
CSNK1E-215ENST00000612795 ITGAVP06756 1048 aa17.99■□□□□ 0.47
CSNK1E-215ENST00000612795 C1SP09871 688 aa17.99■□□□□ 0.47
CSNK1E-215ENST00000612795 RACK1P63244 317 aaKnown RBP17.99■□□□□ 0.47
CSNK1E-215ENST00000612795 INCA1Q0VD86 236 aa17.99■□□□□ 0.47
CSNK1E-215ENST00000612795 TARDBPQ13148 414 aaKnown RBP eCLIP17.99■□□□□ 0.47
CSNK1E-215ENST00000612795 STK38Q15208 465 aa17.99■□□□□ 0.47
CSNK1E-215ENST00000612795 ZACNQ401N2 412 aa17.99■□□□□ 0.47
CSNK1E-215ENST00000612795 MPPE1Q53F39 396 aa17.99■□□□□ 0.47
CSNK1E-215ENST00000612795 HES3Q5TGS1 186 aa17.99■□□□□ 0.47
CSNK1E-215ENST00000612795 CNNM4Q6P4Q7 775 aa17.99■□□□□ 0.47
CSNK1E-215ENST00000612795 CHST9Q7L1S5 443 aa17.99■□□□□ 0.47
CSNK1E-215ENST00000612795 GPR155Q7Z3F1 870 aa17.99■□□□□ 0.47
CSNK1E-215ENST00000612795 ARHGAP18Q8N392 663 aa17.99■□□□□ 0.47
CSNK1E-215ENST00000612795 ZNF843Q8N446 348 aa17.99■□□□□ 0.47
CSNK1E-215ENST00000612795 GANCQ8TET4 914 aa17.99■□□□□ 0.47
CSNK1E-215ENST00000612795 PLD4Q96BZ4 506 aa17.99■□□□□ 0.47
CSNK1E-215ENST00000612795 SLC6A18Q96N87 628 aa17.99■□□□□ 0.47
CSNK1E-215ENST00000612795 ELF4Q99607 663 aaPredicted RBP17.99■□□□□ 0.47
CSNK1E-215ENST00000612795 IMPG2Q9BZV3 1241 aa17.99■□□□□ 0.47
CSNK1E-215ENST00000612795 VILLO15195 856 aa17.98■□□□□ 0.47
CSNK1E-215ENST00000612795 CD58P19256 250 aa17.98■□□□□ 0.47
CSNK1E-215ENST00000612795 HOXD9P28356 352 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms