RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 OSBPL1AQ9BXW6 950 aa13.52□□□□□ -0.25
TCF3-220ENST00000611869 HACD3Q9P035 362 aa13.52□□□□□ -0.25
TCF3-220ENST00000611869 HMGXB4Q9UGU5 601 aa13.52□□□□□ -0.25
TCF3-220ENST00000611869 CHD4Q14839 1912 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 NCAM2O15394 837 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 KLHL2O95198 593 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 CBX6O95503 412 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 RALBP11234 206 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 TCF4P15884 667 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 ALDH7A1P49419 539 aaKnown RBP13.51□□□□□ -0.25
TCF3-220ENST00000611869 ATN1P54259 1190 aaPredicted RBP13.51□□□□□ -0.25
TCF3-220ENST00000611869 FAM182AQ5T1J6 154 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 C16orf46Q6P387 395 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 MAML3Q96JK9 1138 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 OR12D3Q9UGF7 316 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 IPPQ9Y573 584 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 C4AP0C0L4 1744 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 CHADO15335 359 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 SERPINB8P50452 374 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 ITGA9Q13797 1035 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 PDCD2Q16342 344 aaPredicted RBP13.51□□□□□ -0.25
TCF3-220ENST00000611869 ZDHHC24Q6UX98 284 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 TSPAN17Q96FV3 270 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 COLEC11Q9BWP8 271 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 AFF4Q9UHB7 1163 aaKnown RBP13.51□□□□□ -0.25
TCF3-220ENST00000611869 TMEM59LQ9UK28 342 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 BTAF1O14981 1849 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 PTPRJQ12913 1337 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 A0A0A0MRY4 1105 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 ABHD2P08910 425 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 ERVK-10P10266 1014 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 CPA3P15088 417 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 GP5P40197 560 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 TUBP50607 506 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 RASA2Q15283 850 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 SPATA13Q96N96 652 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 ZNF670Q9BS34 389 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 MYH11P35749 1972 aa13.51□□□□□ -0.25
TCF3-220ENST00000611869 COL16A1Q07092 1604 aaPredicted RBP13.51□□□□□ -0.25
TCF3-220ENST00000611869 SKAP2O75563 359 aaPredicted RBP13.5□□□□□ -0.25
TCF3-220ENST00000611869 PIGRP01833 764 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 CD52P31358 61 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 CRYBB1P53674 252 aaPredicted RBP13.5□□□□□ -0.25
TCF3-220ENST00000611869 MRPS6P82932 125 aaKnown RBP13.5□□□□□ -0.25
TCF3-220ENST00000611869 TXNRD3NBQ6F5E7 133 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 OR52K1Q8NGK4 314 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 SH3TC2Q8TF17 1288 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 ULK4Q96C45 1275 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 ACSS3Q9H6R3 686 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 CYP4F12Q9HCS2 524 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 RUVBL2Q9Y230 463 aaKnown RBP13.5□□□□□ -0.25
TCF3-220ENST00000611869 ENDOD1O94919 500 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 HSPA8P11142 646 aaKnown RBP13.5□□□□□ -0.25
TCF3-220ENST00000611869 CREB1P16220 341 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 ATP4AP20648 1035 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 ASPAP45381 313 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 RAB27AP51159 221 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 IL1RL1Q01638 556 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 GBE1Q04446 702 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 ANKRD20A4Q4UJ75 823 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 SLC39A12Q504Y0 691 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 FAM171A1Q5VUB5 890 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 KRT80Q6KB66 452 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 TAS1R3Q7RTX0 852 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 TRABD2AQ86V40 505 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 ILKAPQ9H0C8 392 aaPredicted RBP13.5□□□□□ -0.25
TCF3-220ENST00000611869 TRPV6Q9H1D0 765 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 ARMCX1Q9P291 453 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 BAG5Q9UL15 447 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 TCRBV9S1A1TA0A576 114 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 TTLL13PA6NNM8 815 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 TCN1P20061 433 aaPredicted RBP13.5□□□□□ -0.25
TCF3-220ENST00000611869 SERPINB3P29508 390 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 MTFR1Q15390 333 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 ARHGAP18Q8N392 663 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 C12orf50Q8NA57 414 aaPredicted RBP13.5□□□□□ -0.25
TCF3-220ENST00000611869 FNIP1Q8TF40 1166 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 SDCCAG3Q96C92 435 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 CMTM5Q96DZ9 223 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 SUDS3Q9H7L9 328 aaPredicted RBP13.5□□□□□ -0.25
TCF3-220ENST00000611869 NVLO15381 856 aaKnown RBP13.5□□□□□ -0.25
TCF3-220ENST00000611869 ERCC2P18074 760 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 MATKP42679 507 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 PTP4A2Q12974 167 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 C1orf220Q5T0J3 134 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 ILDR2Q71H61 639 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 TMEM86AQ8N2M4 240 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 PDZD8Q8NEN9 1154 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 NKD2Q969F2 451 aaPredicted RBP13.5□□□□□ -0.25
TCF3-220ENST00000611869 TWNKQ96RR1 684 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 GPR88Q9GZN0 384 aa13.5□□□□□ -0.25
TCF3-220ENST00000611869 EML4Q9HC35 981 aaKnown RBP13.5□□□□□ -0.25
TCF3-220ENST00000611869 SMIM35A0A1B0GVV1 85 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 KIF3CO14782 793 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 STMN1P16949 149 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 CNTFP26441 200 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 CDH17Q12864 832 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 SH3PXD2AQ5TCZ1 1133 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 ANKRD22Q5VYY1 191 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 ZNF280DQ6N043 979 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms