RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 RIF1Q5UIP0 2472 aaKnown RBP27.06■■□□□ 1.92
VEGFA-226ENST00000611736 USP34Q70CQ2 3546 aa27.06■■□□□ 1.92
VEGFA-226ENST00000611736 A0A0A0MRY4 1105 aa27.05■■□□□ 1.92
VEGFA-226ENST00000611736 GOLGA6L7A0A1B0GV03 622 aa27.05■■□□□ 1.92
VEGFA-226ENST00000611736 GOLGA8SH3BPF8 625 aa27.05■■□□□ 1.92
VEGFA-226ENST00000611736 ACSL4O60488 711 aa27.05■■□□□ 1.92
VEGFA-226ENST00000611736 IGLV3-25P01717 112 aa27.05■■□□□ 1.92
VEGFA-226ENST00000611736 FERP16591 822 aa27.05■■□□□ 1.92
VEGFA-226ENST00000611736 TIE1P35590 1138 aa27.05■■□□□ 1.92
VEGFA-226ENST00000611736 DMWDQ09019 674 aa27.05■■□□□ 1.92
VEGFA-226ENST00000611736 ZC3H12AQ5D1E8 599 aaKnown RBP27.05■■□□□ 1.92
VEGFA-226ENST00000611736 C10orf76Q5T2E6 689 aa27.05■■□□□ 1.92
VEGFA-226ENST00000611736 EMC10Q5UCC4 262 aa27.05■■□□□ 1.92
VEGFA-226ENST00000611736 LRSAM1Q6UWE0 723 aa27.05■■□□□ 1.92
VEGFA-226ENST00000611736 MMS22LQ6ZRQ5 1243 aa27.05■■□□□ 1.92
VEGFA-226ENST00000611736 CCDC33Q8N5R6 958 aa27.05■■□□□ 1.92
VEGFA-226ENST00000611736 ZNF397Q8NF99 534 aaPredicted RBP27.05■■□□□ 1.92
VEGFA-226ENST00000611736 SLC30A5Q8TAD4 765 aa27.05■■□□□ 1.92
VEGFA-226ENST00000611736 ZDHHC4Q9NPG8 344 aa27.05■■□□□ 1.92
VEGFA-226ENST00000611736 DDIT4Q9NX09 232 aa27.05■■□□□ 1.92
VEGFA-226ENST00000611736 LRRC53A6NM62 1247 aa27.04■■□□□ 1.92
VEGFA-226ENST00000611736 APOEP02649 317 aa27.04■■□□□ 1.92
VEGFA-226ENST00000611736 MPPE1Q53F39 396 aa27.04■■□□□ 1.92
VEGFA-226ENST00000611736 FAM133BQ5BKY9 247 aaKnown RBP27.04■■□□□ 1.92
VEGFA-226ENST00000611736 HEATR6Q6AI08 1181 aaKnown RBP27.04■■□□□ 1.92
VEGFA-226ENST00000611736 RFWD3Q6PCD5 774 aa27.04■■□□□ 1.92
VEGFA-226ENST00000611736 NUDT18Q6ZVK8 323 aa27.04■■□□□ 1.92
VEGFA-226ENST00000611736 ATRIPQ8WXE1 791 aa27.04■■□□□ 1.92
VEGFA-226ENST00000611736 AGPAT1Q99943 283 aa27.04■■□□□ 1.92
VEGFA-226ENST00000611736 FAM126AQ9BYI3 521 aaPredicted RBP27.04■■□□□ 1.92
VEGFA-226ENST00000611736 MYO6Q9UM54 1294 aa27.04■■□□□ 1.92
VEGFA-226ENST00000611736 CISD3P0C7P0 127 aa27.03■■□□□ 1.92
VEGFA-226ENST00000611736 CCDC172P0C7W6 258 aa27.03■■□□□ 1.92
VEGFA-226ENST00000611736 SLC6A4P31645 630 aa27.03■■□□□ 1.92
VEGFA-226ENST00000611736 GBP1P32455 592 aa27.03■■□□□ 1.92
VEGFA-226ENST00000611736 FNTBP49356 437 aa27.03■■□□□ 1.92
VEGFA-226ENST00000611736 SGSHP51688 502 aa27.03■■□□□ 1.92
VEGFA-226ENST00000611736 NRLP54845 237 aa27.03■■□□□ 1.92
VEGFA-226ENST00000611736 ZNF445P59923 1031 aa27.03■■□□□ 1.92
VEGFA-226ENST00000611736 MRPS21P82921 87 aaKnown RBP27.03■■□□□ 1.92
VEGFA-226ENST00000611736 DMC1Q14565 340 aa27.03■■□□□ 1.92
VEGFA-226ENST00000611736 NADSYN1Q6IA69 706 aa27.03■■□□□ 1.92
VEGFA-226ENST00000611736 PHLDB2Q86SQ0 1253 aa27.03■■□□□ 1.92
VEGFA-226ENST00000611736 ALLCQ8N6M5 410 aa27.03■■□□□ 1.92
VEGFA-226ENST00000611736 NELL1Q92832 810 aa27.03■■□□□ 1.92
VEGFA-226ENST00000611736 AZIN2Q96A70 460 aa27.03■■□□□ 1.92
VEGFA-226ENST00000611736 TMA16Q96EY4 203 aaKnown RBP27.03■■□□□ 1.92
VEGFA-226ENST00000611736 HHIPQ96QV1 700 aa27.03■■□□□ 1.92
VEGFA-226ENST00000611736 C11orf70Q9BRQ4 267 aa27.03■■□□□ 1.92
VEGFA-226ENST00000611736 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.03■■□□□ 1.924e-6■□□□□ 10.5
VEGFA-226ENST00000611736 IFNKQ9P0W0 207 aa27.03■■□□□ 1.92
VEGFA-226ENST00000611736 XPO7Q9UIA9 1087 aaKnown RBP27.03■■□□□ 1.92
VEGFA-226ENST00000611736 FBXO10Q9UK96 956 aa27.03■■□□□ 1.92
VEGFA-226ENST00000611736 CLEC4EQ9ULY5 219 aa27.03■■□□□ 1.92
VEGFA-226ENST00000611736 PCDHGA2Q9Y5H1 932 aa27.03■■□□□ 1.92
VEGFA-226ENST00000611736 GFRA2O00451 464 aa27.02■■□□□ 1.92
VEGFA-226ENST00000611736 KLF8O95600 359 aaPredicted RBP27.02■■□□□ 1.92
VEGFA-226ENST00000611736 CHRM1P11229 460 aaPredicted RBP27.02■■□□□ 1.92
VEGFA-226ENST00000611736 UNGP13051 313 aaPredicted RBP27.02■■□□□ 1.92
VEGFA-226ENST00000611736 MMP8P22894 467 aa27.02■■□□□ 1.92
VEGFA-226ENST00000611736 HOXD9P28356 352 aaPredicted RBP27.02■■□□□ 1.92
VEGFA-226ENST00000611736 NOS2P35228 1153 aa27.02■■□□□ 1.92
VEGFA-226ENST00000611736 SCNN1AP37088 669 aa27.02■■□□□ 1.92
VEGFA-226ENST00000611736 MATKP42679 507 aa27.02■■□□□ 1.92
VEGFA-226ENST00000611736 KIR2DL1P43626 348 aaPredicted RBP27.02■■□□□ 1.92
VEGFA-226ENST00000611736 NME3Q13232 169 aa27.02■■□□□ 1.92
VEGFA-226ENST00000611736 CLEC16AQ2KHT3 1053 aa27.02■■□□□ 1.92
VEGFA-226ENST00000611736 SYT13Q7L8C5 426 aa27.02■■□□□ 1.92
VEGFA-226ENST00000611736 IRF2BP2Q7Z5L9 587 aa27.02■■□□□ 1.92
VEGFA-226ENST00000611736 RNF34Q969K3 372 aa27.02■■□□□ 1.92
VEGFA-226ENST00000611736 NUCKS1Q9H1E3 243 aaKnown RBP27.02■■□□□ 1.92
VEGFA-226ENST00000611736 PRRT4C9JH25 899 aa27.01■■□□□ 1.91
VEGFA-226ENST00000611736 PROB1E7EW31 1015 aa27.01■■□□□ 1.91
VEGFA-226ENST00000611736 NSFP46459 744 aaKnown RBP27.01■■□□□ 1.91
VEGFA-226ENST00000611736 PXNP49023 591 aaPredicted RBP27.01■■□□□ 1.91
VEGFA-226ENST00000611736 EIF4EBP2Q13542 120 aaPredicted RBP27.01■■□□□ 1.91
VEGFA-226ENST00000611736 ASIC2Q16515 512 aa27.01■■□□□ 1.91
VEGFA-226ENST00000611736 PIK3R6Q5UE93 754 aa27.01■■□□□ 1.91
VEGFA-226ENST00000611736 IL17RCQ8NAC3 791 aa27.01■■□□□ 1.91
VEGFA-226ENST00000611736 TXNDC5Q8NBS9 432 aaKnown RBP27.01■■□□□ 1.91
VEGFA-226ENST00000611736 ZBTB44Q8NCP5 570 aa27.01■■□□□ 1.91
VEGFA-226ENST00000611736 RNF214Q8ND24 703 aa27.01■■□□□ 1.91
VEGFA-226ENST00000611736 DDX50Q9BQ39 737 aaKnown RBP27.01■■□□□ 1.91
VEGFA-226ENST00000611736 TTYH3Q9C0H2 523 aa27.01■■□□□ 1.91
VEGFA-226ENST00000611736 MMP17Q9ULZ9 603 aa27.01■■□□□ 1.91
VEGFA-226ENST00000611736 FRYLO94915 3013 aa27.01■■□□□ 1.91
VEGFA-226ENST00000611736 GPR179Q6PRD1 2367 aa27.01■■□□□ 1.91
VEGFA-226ENST00000611736 M0QYT0 321 aa27■■□□□ 1.91
VEGFA-226ENST00000611736 TBL1XO60907 577 aa27■■□□□ 1.91
VEGFA-226ENST00000611736 SULT1E1P49888 294 aa27■■□□□ 1.91
VEGFA-226ENST00000611736 SFMBT2Q5VUG0 894 aa27■■□□□ 1.91
VEGFA-226ENST00000611736 ZNF513Q8N8E2 541 aaPredicted RBP27■■□□□ 1.91
VEGFA-226ENST00000611736 NKD2Q969F2 451 aaPredicted RBP27■■□□□ 1.91
VEGFA-226ENST00000611736 METTL5Q9NRN9 209 aaKnown RBP27■■□□□ 1.91
VEGFA-226ENST00000611736 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27■■□□□ 1.912e-7■■■■□ 22.2
VEGFA-226ENST00000611736 STAP1Q9ULZ2 295 aa27■■□□□ 1.91
VEGFA-226ENST00000611736 TFE3P19532 575 aaPredicted RBP26.99■■□□□ 1.91
VEGFA-226ENST00000611736 CCR1P32246 355 aa26.99■■□□□ 1.91
VEGFA-226ENST00000611736 FLT3P36888 993 aa26.99■■□□□ 1.91
VEGFA-226ENST00000611736 PBX1P40424 430 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms