RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 ANKRD20A2Q5SQ80 823 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 ANKRD20A1Q5TYW2 823 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 ANKRD20A3Q5VUR7 823 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 RGS9BPQ6ZS82 235 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 ZNF534Q76KX8 674 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 MYLPFQ96A32 169 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 ALKBH8Q96BT7 664 aaKnown RBP28.97■■■□□ 2.23
CSPG5-205ENST00000610462 SPATA13Q96N96 652 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 LGMNQ99538 433 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 ADAM2Q99965 735 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 ACBD6Q9BR61 282 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 EEF2KO00418 725 aaKnown RBP28.97■■■□□ 2.23
CSPG5-205ENST00000610462 TRDMT1O14717 391 aaKnown RBP28.97■■■□□ 2.23
CSPG5-205ENST00000610462 LTFP02788 710 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 INHBAP08476 426 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 PRKAR2AP13861 404 aaKnown RBP28.97■■■□□ 2.23
CSPG5-205ENST00000610462 FDFT1P37268 417 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 PRKD1Q15139 912 aaPredicted RBP28.97■■■□□ 2.23
CSPG5-205ENST00000610462 MTFR1Q15390 333 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 PACS2Q86VP3 889 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 PCSK9Q8NBP7 692 aaKnown RBP28.97■■■□□ 2.23
CSPG5-205ENST00000610462 GRAMD1AQ96CP6 724 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 PGAP3Q96FM1 320 aaPredicted RBP28.97■■■□□ 2.23
CSPG5-205ENST00000610462 WDR6Q9NNW5 1121 aaKnown RBP28.97■■■□□ 2.23
CSPG5-205ENST00000610462 RRN3Q9NYV6 651 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 B3GAT3O94766 335 aa28.96■■■□□ 2.23
CSPG5-205ENST00000610462 C1QAP02745 245 aa28.96■■■□□ 2.23
CSPG5-205ENST00000610462 SCAPQ12770 1279 aa28.96■■■□□ 2.23
CSPG5-205ENST00000610462 PDK4Q16654 411 aa28.96■■■□□ 2.23
CSPG5-205ENST00000610462 FAM26DQ5JW98 314 aa28.96■■■□□ 2.23
CSPG5-205ENST00000610462 FAM171BQ6P995 826 aa28.96■■■□□ 2.23
CSPG5-205ENST00000610462 CD300LGQ6UXG3 332 aa28.96■■■□□ 2.23
CSPG5-205ENST00000610462 RFX8Q6ZV50 586 aa28.96■■■□□ 2.23
CSPG5-205ENST00000610462 XAB2Q9HCS7 855 aaKnown RBP28.96■■■□□ 2.23
CSPG5-205ENST00000610462 GRID1Q9ULK0 1009 aa28.96■■■□□ 2.23
CSPG5-205ENST00000610462 NCAM1P13591 858 aa28.95■■■□□ 2.23
CSPG5-205ENST00000610462 IBSPP21815 317 aaPredicted RBP28.95■■■□□ 2.23
CSPG5-205ENST00000610462 PAX3P23760 479 aa28.95■■■□□ 2.23
CSPG5-205ENST00000610462 GLUD2P49448 558 aa28.95■■■□□ 2.23
CSPG5-205ENST00000610462 PDK1Q15118 436 aa28.95■■■□□ 2.23
CSPG5-205ENST00000610462 HHATQ5VTY9 493 aa28.95■■■□□ 2.23
CSPG5-205ENST00000610462 TRPM8Q7Z2W7 1104 aa28.95■■■□□ 2.23
CSPG5-205ENST00000610462 PRPF39Q86UA1 669 aaKnown RBP28.95■■■□□ 2.23
CSPG5-205ENST00000610462 SIGLEC10Q96LC7 697 aa28.95■■■□□ 2.23
CSPG5-205ENST00000610462 FBXW11Q9UKB1 542 aa28.95■■■□□ 2.23
CSPG5-205ENST00000610462 TMEM88BA6NKF7 163 aa28.95■■■□□ 2.22
CSPG5-205ENST00000610462 SKIP12755 728 aa28.95■■■□□ 2.22
CSPG5-205ENST00000610462 BRCC3P46736 316 aa28.95■■■□□ 2.22
CSPG5-205ENST00000610462 CAP1Q01518 475 aa28.95■■■□□ 2.22
CSPG5-205ENST00000610462 TUSC3Q13454 348 aa28.95■■■□□ 2.22
CSPG5-205ENST00000610462 TRIM71Q2Q1W2 868 aaKnown RBP28.95■■■□□ 2.22
CSPG5-205ENST00000610462 INTS6LQ5JSJ4 861 aaKnown RBP28.95■■■□□ 2.22
CSPG5-205ENST00000610462 CGB2Q6NT52 195 aa28.95■■■□□ 2.22
CSPG5-205ENST00000610462 BHLHA9Q7RTU4 235 aa28.95■■■□□ 2.22
CSPG5-205ENST00000610462 BANPQ8N9N5 519 aa28.95■■■□□ 2.22
CSPG5-205ENST00000610462 ADAM32Q8TC27 787 aa28.95■■■□□ 2.22
CSPG5-205ENST00000610462 FERMT1Q9BQL6 677 aa28.95■■■□□ 2.22
CSPG5-205ENST00000610462 RHOBTB2Q9BYZ6 727 aa28.95■■■□□ 2.22
CSPG5-205ENST00000610462 PITPNM3Q9BZ71 974 aa28.95■■■□□ 2.22
CSPG5-205ENST00000610462 PLAC1Q9HBJ0 212 aa28.95■■■□□ 2.22
CSPG5-205ENST00000610462 DSEQ9UL01 958 aa28.95■■■□□ 2.22
CSPG5-205ENST00000610462 ARL2BPQ9Y2Y0 163 aa28.95■■■□□ 2.22
CSPG5-205ENST00000610462 NR2E3Q9Y5X4 410 aa28.95■■■□□ 2.22
CSPG5-205ENST00000610462 M0QZQ0 153 aa28.94■■■□□ 2.22
CSPG5-205ENST00000610462 DCLK1O15075 740 aa28.94■■■□□ 2.22
CSPG5-205ENST00000610462 STK10O94804 968 aaKnown RBP28.94■■■□□ 2.22
CSPG5-205ENST00000610462 MT-ND3P03897 115 aa28.94■■■□□ 2.22
CSPG5-205ENST00000610462 ELNP15502 786 aa28.94■■■□□ 2.22
CSPG5-205ENST00000610462 PRKCHP24723 683 aa28.94■■■□□ 2.22
CSPG5-205ENST00000610462 PAN2Q504Q3 1202 aaKnown RBP28.94■■■□□ 2.22
CSPG5-205ENST00000610462 LVRNQ6Q4G3 990 aa28.94■■■□□ 2.22
CSPG5-205ENST00000610462 DENND5BQ6ZUT9 1274 aa28.94■■■□□ 2.22
CSPG5-205ENST00000610462 HHIPL1Q96JK4 782 aa28.94■■■□□ 2.22
CSPG5-205ENST00000610462 UROC1Q96N76 676 aa28.94■■■□□ 2.22
CSPG5-205ENST00000610462 PRKAG3Q9UGI9 489 aa28.94■■■□□ 2.22
CSPG5-205ENST00000610462 THSD7BQ9C0I4 1608 aa28.94■■■□□ 2.22
CSPG5-205ENST00000610462 PPP1R12AO14974 1030 aaPredicted RBP28.93■■■□□ 2.22
CSPG5-205ENST00000610462 SCTRP47872 440 aa28.93■■■□□ 2.22
CSPG5-205ENST00000610462 SARNPP82979 210 aaKnown RBP28.93■■■□□ 2.22
CSPG5-205ENST00000610462 FAAP100Q0VG06 881 aa28.93■■■□□ 2.22
CSPG5-205ENST00000610462 AP1B1Q10567 949 aa28.93■■■□□ 2.22
CSPG5-205ENST00000610462 ITGA7Q13683 1181 aa28.93■■■□□ 2.22
CSPG5-205ENST00000610462 SLC26A11Q86WA9 606 aa28.93■■■□□ 2.22
CSPG5-205ENST00000610462 IRGQQ8WZA9 623 aa28.93■■■□□ 2.22
CSPG5-205ENST00000610462 P2RY11Q96G91 374 aa28.93■■■□□ 2.22
CSPG5-205ENST00000610462 EBNA1BP2Q99848 306 aaKnown RBP28.93■■■□□ 2.22
CSPG5-205ENST00000610462 PLCD4Q9BRC7 762 aa28.93■■■□□ 2.22
CSPG5-205ENST00000610462 TRMT13Q9NUP7 481 aaKnown RBP28.93■■■□□ 2.22
CSPG5-205ENST00000610462 NOD1Q9Y239 953 aa28.93■■■□□ 2.22
CSPG5-205ENST00000610462 INPP5FQ9Y2H2 1132 aa28.93■■■□□ 2.22
CSPG5-205ENST00000610462 TM9SF1O15321 606 aa28.93■■■□□ 2.22
CSPG5-205ENST00000610462 OPHN1O60890 802 aa28.93■■■□□ 2.22
CSPG5-205ENST00000610462 CDK16Q00536 496 aa28.93■■■□□ 2.22
CSPG5-205ENST00000610462 SEMA3BQ13214 749 aa28.93■■■□□ 2.22
CSPG5-205ENST00000610462 COLGALT1Q8NBJ5 622 aa28.93■■■□□ 2.22
CSPG5-205ENST00000610462 ANLNQ9NQW6 1124 aa28.93■■■□□ 2.22
CSPG5-205ENST00000610462 PTPRDP23468 1912 aa28.92■■■□□ 2.22
CSPG5-205ENST00000610462 COL4A4P53420 1690 aaPredicted RBP28.92■■■□□ 2.22
CSPG5-205ENST00000610462 H0YHG0 523 aa28.92■■■□□ 2.22
CSPG5-205ENST00000610462 F9P00740 461 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms