RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 OSCP1Q8WVF1 389 aa9.37□□□□□ -0.91
COL25A1-208ENST00000610288 USP13Q92995 863 aaPredicted RBP9.37□□□□□ -0.91
COL25A1-208ENST00000610288 GPRASP2Q96D09 838 aa9.37□□□□□ -0.91
COL25A1-208ENST00000610288 MTMR9Q96QG7 549 aa9.37□□□□□ -0.91
COL25A1-208ENST00000610288 C9orf16Q9BUW7 83 aa9.37□□□□□ -0.91
COL25A1-208ENST00000610288 COPS7BQ9H9Q2 264 aaPredicted RBP9.37□□□□□ -0.91
COL25A1-208ENST00000610288 PCDH18Q9HCL0 1135 aa9.37□□□□□ -0.91
COL25A1-208ENST00000610288 GPAMQ9HCL2 828 aa9.37□□□□□ -0.91
COL25A1-208ENST00000610288 TRIM39Q9HCM9 518 aa9.37□□□□□ -0.91
COL25A1-208ENST00000610288 MAP3K20Q9NYL2 800 aaKnown RBP9.37□□□□□ -0.91
COL25A1-208ENST00000610288 ERAP1Q9NZ08 941 aa9.37□□□□□ -0.91
COL25A1-208ENST00000610288 RABL2AQ9UBK7 228 aaPredicted RBP9.37□□□□□ -0.91
COL25A1-208ENST00000610288 DRG1Q9Y295 367 aaKnown RBP9.37□□□□□ -0.91
COL25A1-208ENST00000610288 EEF2KO00418 725 aaKnown RBP9.36□□□□□ -0.91
COL25A1-208ENST00000610288 LZTS3O60299 673 aaPredicted RBP9.36□□□□□ -0.91
COL25A1-208ENST00000610288 ICAM1P05362 532 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 ITGA2BP08514 1039 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 PTGS2P35354 604 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 GP5P40197 560 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 MRPS22P82650 360 aaKnown RBP9.36□□□□□ -0.91
COL25A1-208ENST00000610288 KLHL12Q53G59 568 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 FAAH2Q6GMR7 532 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 SNX32Q86XE0 403 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 DHFR2Q86XF0 187 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 ULK2Q8IYT8 1036 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 RASSF5Q8WWW0 418 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 GPRC5CQ9NQ84 441 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 TBCCD1Q9NVR7 557 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 SPEF1Q9Y4P9 236 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 DIP2AQ14689 1571 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 FAM237BA0A1B0GVD1 139 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 CYP2C9P11712 490 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 NAA20P61599 178 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 SNAPC2Q13487 334 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 TSC22D1Q15714 1073 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 AGKQ53H12 422 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 ZC3H12BQ5HYM0 836 aaKnown RBP9.36□□□□□ -0.91
COL25A1-208ENST00000610288 DEPDC1Q5TB30 811 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 PRMT9Q6P2P2 845 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 TXNRD3Q86VQ6 643 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 ARHGEF19Q8IW93 802 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 STX19Q8N4C7 294 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 DHRSXQ8N5I4 330 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 ATPAF2Q8N5M1 289 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 SHCBP1Q8NEM2 672 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 EPS8L1Q8TE68 723 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 PABPC5Q96DU9 382 aaKnown RBP9.36□□□□□ -0.91
COL25A1-208ENST00000610288 OSBPL10Q9BXB5 764 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 EBF2Q9HAK2 575 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 FANCEQ9HB96 536 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 ARHGEF3Q9NR81 526 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 IARS2Q9NSE4 1012 aaKnown RBP9.36□□□□□ -0.91
COL25A1-208ENST00000610288 CROTQ9UKG9 612 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 SLC12A4Q9UP95 1085 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 CENPXA8MT69 81 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 MYO1DO94832 1006 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 ASMTLO95671 621 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 PENKP01210 267 aaPredicted RBP9.36□□□□□ -0.91
COL25A1-208ENST00000610288 LYNP07948 512 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 HLA-DPA1P20036 260 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 CYP24A1Q07973 514 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 MMRN1Q13201 1228 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 C15orf59Q2T9L4 293 aaPredicted RBP9.36□□□□□ -0.91
COL25A1-208ENST00000610288 SAMD4BQ5PRF9 694 aaKnown RBP9.36□□□□□ -0.91
COL25A1-208ENST00000610288 AADACL2Q6P093 401 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 ARCQ7LC44 396 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 KCNK18Q7Z418 384 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 SGF29Q96ES7 293 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 HPDLQ96IR7 371 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 CLEC4MQ9H2X3 399 aaPredicted RBP9.36□□□□□ -0.91
COL25A1-208ENST00000610288 STK39Q9UEW8 545 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 POLLQ9UGP5 575 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 BARX2Q9UMQ3 279 aaPredicted RBP9.36□□□□□ -0.91
COL25A1-208ENST00000610288 KCNH4Q9UQ05 1017 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 ACOT9Q9Y305 439 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 FARP1Q9Y4F1 1045 aaPredicted RBP9.36□□□□□ -0.91
COL25A1-208ENST00000610288 V9GYQ6 96 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 MYO1GB0I1T2 1018 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 PDLIM1O00151 329 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 UBDO15205 165 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 MPOP05164 745 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 CYP1A2P05177 515 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 MARSP56192 900 aaKnown RBP9.36□□□□□ -0.91
COL25A1-208ENST00000610288 PSMC6P62333 389 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 CSTF3Q12996 717 aaKnown RBP9.36□□□□□ -0.91
COL25A1-208ENST00000610288 ANO4Q32M45 955 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 DCAF6Q58WW2 860 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 HGSNATQ68CP4 663 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 PACS1Q6VY07 963 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 GET4Q7L5D6 327 aaPredicted RBP9.36□□□□□ -0.91
COL25A1-208ENST00000610288 FNIP1Q8TF40 1166 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 PRMT6Q96LA8 375 aaPredicted RBP9.36□□□□□ -0.91
COL25A1-208ENST00000610288 APOL4Q9BPW4 351 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 BDH2Q9BUT1 245 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 TTYH3Q9C0H2 523 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 ZNF556Q9HAH1 456 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 TRNAU1APQ9NX07 287 aaKnown RBP9.36□□□□□ -0.91
COL25A1-208ENST00000610288 DSEQ9UL01 958 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 USP18Q9UMW8 372 aa9.36□□□□□ -0.91
COL25A1-208ENST00000610288 PCDHGB4Q9UN71 923 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms