RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 FAM72BQ86X60 149 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 NME8Q8N427 588 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MCUQ8NE86 351 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 OXNAD1Q96HP4 312 aaPredicted RBP12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 KCNK16Q96T55 309 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 TACO1Q9BSH4 297 aaKnown RBP12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 LRMDAQ9H2I8 198 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MARCOQ9UEW3 520 aaPredicted RBP12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 FZD10Q9ULW2 581 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 BPTFQ12830 3046 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 KCNK1O00180 336 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 NRP1O14786 923 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 DLDP09622 509 aaKnown RBP12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 KITP10721 976 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 CYP2B6P20813 491 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 NR2C2P49116 596 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 PSEN2P49810 448 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 NBPF20Q3BBV1 942 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MDH1BQ5I0G3 518 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 NDUFAF2Q8N183 169 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 COLGALT1Q8NBJ5 622 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 GSDMBQ8TAX9 411 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 P2RY11Q96G91 374 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 HSFY1Q96LI6 401 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ZNF560Q96MR9 790 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 PARK7Q99497 189 aaKnown RBP12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 TMEM120AQ9BXJ8 343 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 DUSP16Q9BY84 665 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ANLNQ9NQW6 1124 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 PIGVQ9NUD9 493 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 PLLPQ9Y342 182 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 TRDMT1O14717 391 aaKnown RBP12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ZNF865P0CJ78 1059 aaPredicted RBP12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 GM2AP17900 193 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 PTPN1P18031 435 aaKnown RBP12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 RPL34P49207 117 aaKnown RBP12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ARFIP2P53365 341 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 EFHC1Q5JVL4 640 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SPRYD7Q5W111 196 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ZCCHC23Q6ZST2 131 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 LONP2Q86WA8 852 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 RNF139Q8WU17 664 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 TNIP3Q96KP6 325 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 OLFM3Q96PB7 478 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 LBHD1Q9BQE6 289 aaPredicted RBP12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MED10Q9BTT4 135 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 TMEM30AQ9NV96 361 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ARL8BQ9NVJ2 186 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ARMCX1Q9P291 453 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MAGED2Q9UNF1 606 aaPredicted RBP12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SLC45A1Q9Y2W3 748 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 E2F8A0AVK6 867 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 I6L893 689 aaPredicted RBP12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 RNF103O00237 685 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 XPO1O14980 1071 aaKnown RBP12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 DGKIO75912 1065 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MYL2P10916 166 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 KCNE1P15382 129 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ZFXP17010 805 aaPredicted RBP12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 NPR3P17342 541 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ACADSBP45954 432 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ZBTB16Q05516 673 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 BST1Q10588 318 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SEMA5AQ13591 1074 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 CLEC20AQ6ZU45 233 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 STRADAQ7RTN6 431 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 CHSY1Q86X52 802 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 DEPDC1BQ8WUY9 529 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 LPPQ93052 612 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 AGAP3Q96P47 875 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 FRMD8Q9BZ67 464 aaPredicted RBP12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 C20orf27Q9GZN8 174 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 PRDM12Q9H4Q4 367 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 LRRC4Q9HBW1 653 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 NKX1-2Q9UD57 310 aaPredicted RBP12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 PSAT1Q9Y617 370 aa12.17□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 A0A0A0MRY4 1105 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 FAM159BA6NKW6 160 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 USP12O75317 370 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MGAT1P26572 445 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 PSMB4P28070 264 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 TKTL1P51854 596 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 CACNA2D1P54289 1103 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 TMPRSS15P98073 1019 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 CDC42EP1Q00587 391 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SV2CQ496J9 727 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 C16orf46Q6P387 395 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 GPRIN1Q7Z2K8 1008 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 FAM13CQ8NE31 585 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SPATA13Q96N96 652 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 HNRNPABQ99729 332 aaKnown RBP12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MIPEPQ99797 713 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 RHOBTB2Q9BYZ6 727 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 YJEFN3A6XGL0 299 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 E7ENQ6 273 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 CELF2O95319 508 aaKnown RBP12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 FYNP06241 537 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 TPSB2P20231 275 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 PNPLA4P41247 253 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 TPSAB1Q15661 275 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms