RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 NAA35Q5VZE5 725 aa17.4■□□□□ 0.38
SSBP4-213ENST00000602088 XYLT1Q86Y38 959 aa17.4■□□□□ 0.38
SSBP4-213ENST00000602088 DDI1Q8WTU0 396 aa17.4■□□□□ 0.38
SSBP4-213ENST00000602088 ATRIPQ8WXE1 791 aa17.4■□□□□ 0.38
SSBP4-213ENST00000602088 ACDQ96AP0 544 aa17.4■□□□□ 0.38
SSBP4-213ENST00000602088 SEMA4AQ9H3S1 761 aa17.4■□□□□ 0.38
SSBP4-213ENST00000602088 POLR3BQ9NW08 1133 aaPredicted RBP17.4■□□□□ 0.38
SSBP4-213ENST00000602088 MYO6Q9UM54 1294 aa17.4■□□□□ 0.38
SSBP4-213ENST00000602088 SLC8A2Q9UPR5 921 aa17.4■□□□□ 0.38
SSBP4-213ENST00000602088 SLC27A6Q9Y2P4 619 aa17.4■□□□□ 0.38
SSBP4-213ENST00000602088 GOLGA6L7A0A1B0GV03 622 aa17.39■□□□□ 0.37
SSBP4-213ENST00000602088 FAM170AA1A519 330 aa17.39■□□□□ 0.37
SSBP4-213ENST00000602088 LILRB5O75023 590 aa17.39■□□□□ 0.37
SSBP4-213ENST00000602088 DAB1O75553 588 aa17.39■□□□□ 0.37
SSBP4-213ENST00000602088 NOS2P35228 1153 aa17.39■□□□□ 0.37
SSBP4-213ENST00000602088 SCNN1AP37088 669 aa17.39■□□□□ 0.37
SSBP4-213ENST00000602088 MRE11P49959 708 aa17.39■□□□□ 0.37
SSBP4-213ENST00000602088 DMWDQ09019 674 aa17.39■□□□□ 0.37
SSBP4-213ENST00000602088 DMC1Q14565 340 aa17.39■□□□□ 0.37
SSBP4-213ENST00000602088 C2CD6Q53TS8 623 aa17.39■□□□□ 0.37
SSBP4-213ENST00000602088 FAM133BQ5BKY9 247 aaKnown RBP17.39■□□□□ 0.37
SSBP4-213ENST00000602088 C10orf76Q5T2E6 689 aa17.39■□□□□ 0.37
SSBP4-213ENST00000602088 TRIM72Q6ZMU5 477 aa17.39■□□□□ 0.37
SSBP4-213ENST00000602088 CAMKK1Q8N5S9 505 aa17.39■□□□□ 0.37
SSBP4-213ENST00000602088 IL17RCQ8NAC3 791 aa17.39■□□□□ 0.37
SSBP4-213ENST00000602088 MSANTD4Q8NCY6 345 aa17.39■□□□□ 0.37
SSBP4-213ENST00000602088 KCNV2Q8TDN2 545 aa17.39■□□□□ 0.37
SSBP4-213ENST00000602088 BAP1Q92560 729 aa17.39■□□□□ 0.37
SSBP4-213ENST00000602088 NKD2Q969F2 451 aaPredicted RBP17.39■□□□□ 0.37
SSBP4-213ENST00000602088 TMA16Q96EY4 203 aaKnown RBP17.39■□□□□ 0.37
SSBP4-213ENST00000602088 PCDHB18PQ96TA0 734 aa17.39■□□□□ 0.37
SSBP4-213ENST00000602088 SLC2A11Q9BYW1 496 aa17.39■□□□□ 0.37
SSBP4-213ENST00000602088 IRX2Q9BZI1 471 aaPredicted RBP17.39■□□□□ 0.37
SSBP4-213ENST00000602088 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.39■□□□□ 0.371e-7■■■□□ 16.3
SSBP4-213ENST00000602088 MMP17Q9ULZ9 603 aa17.39■□□□□ 0.37
SSBP4-213ENST00000602088 STARD13Q9Y3M8 1113 aa17.39■□□□□ 0.37
SSBP4-213ENST00000602088 PRRT4C9JH25 899 aa17.38■□□□□ 0.37
SSBP4-213ENST00000602088 UNGP13051 313 aaPredicted RBP17.38■□□□□ 0.37
SSBP4-213ENST00000602088 FERP16591 822 aa17.38■□□□□ 0.37
SSBP4-213ENST00000602088 MMP8P22894 467 aa17.38■□□□□ 0.37
SSBP4-213ENST00000602088 HOXD11P31277 338 aaPredicted RBP17.38■□□□□ 0.37
SSBP4-213ENST00000602088 SLC6A4P31645 630 aa17.38■□□□□ 0.37
SSBP4-213ENST00000602088 TIE1P35590 1138 aa17.38■□□□□ 0.37
SSBP4-213ENST00000602088 FNTBP49356 437 aa17.38■□□□□ 0.37
SSBP4-213ENST00000602088 HSF5Q4G112 596 aaPredicted RBP17.38■□□□□ 0.37
SSBP4-213ENST00000602088 ZC3H12AQ5D1E8 599 aaKnown RBP17.38■□□□□ 0.37
SSBP4-213ENST00000602088 FAM102AQ5T9C2 384 aaPredicted RBP17.38■□□□□ 0.37
SSBP4-213ENST00000602088 PIK3R6Q5UE93 754 aa17.38■□□□□ 0.37
SSBP4-213ENST00000602088 NADSYN1Q6IA69 706 aa17.38■□□□□ 0.37
SSBP4-213ENST00000602088 RFWD3Q6PCD5 774 aa17.38■□□□□ 0.37
SSBP4-213ENST00000602088 IRF2BP2Q7Z5L9 587 aa17.38■□□□□ 0.37
SSBP4-213ENST00000602088 ALYREFQ86V81 257 aaKnown RBP17.38■□□□□ 0.37
SSBP4-213ENST00000602088 LONP2Q86WA8 852 aa17.38■□□□□ 0.37
SSBP4-213ENST00000602088 CCDC33Q8N5R6 958 aa17.38■□□□□ 0.37
SSBP4-213ENST00000602088 ALLCQ8N6M5 410 aa17.38■□□□□ 0.37
SSBP4-213ENST00000602088 HCN2Q9UL51 889 aa17.38■□□□□ 0.37
SSBP4-213ENST00000602088 CLEC4EQ9ULY5 219 aa17.38■□□□□ 0.37
SSBP4-213ENST00000602088 MYO18AQ92614 2054 aaKnown RBP17.38■□□□□ 0.37
SSBP4-213ENST00000602088 CCDC163A0A0D9SF12 145 aa17.37■□□□□ 0.37
SSBP4-213ENST00000602088 PRR23AA6NEV1 266 aa17.37■□□□□ 0.37
SSBP4-213ENST00000602088 KLF8O95600 359 aaPredicted RBP17.37■□□□□ 0.37
SSBP4-213ENST00000602088 APOEP02649 317 aa17.37■□□□□ 0.37
SSBP4-213ENST00000602088 CCDC172P0C7W6 258 aa17.37■□□□□ 0.37
SSBP4-213ENST00000602088 HOXD9P28356 352 aaPredicted RBP17.37■□□□□ 0.37
SSBP4-213ENST00000602088 GBP1P32455 592 aa17.37■□□□□ 0.37
SSBP4-213ENST00000602088 MATKP42679 507 aa17.37■□□□□ 0.37
SSBP4-213ENST00000602088 UBASH3AP57075 661 aa17.37■□□□□ 0.37
SSBP4-213ENST00000602088 RNASE9P60153 205 aaKnown RBP17.37■□□□□ 0.37
SSBP4-213ENST00000602088 MPP7Q5T2T1 576 aa17.37■□□□□ 0.37
SSBP4-213ENST00000602088 HEATR6Q6AI08 1181 aaKnown RBP17.37■□□□□ 0.37
SSBP4-213ENST00000602088 LRSAM1Q6UWE0 723 aa17.37■□□□□ 0.37
SSBP4-213ENST00000602088 ASCL5Q7RTU5 278 aa17.37■□□□□ 0.37
SSBP4-213ENST00000602088 TXNDC5Q8NBS9 432 aaKnown RBP17.37■□□□□ 0.37
SSBP4-213ENST00000602088 SLC30A5Q8TAD4 765 aa17.37■□□□□ 0.37
SSBP4-213ENST00000602088 NT5C3BQ969T7 300 aa17.37■□□□□ 0.37
SSBP4-213ENST00000602088 AGPAT1Q99943 283 aa17.37■□□□□ 0.37
SSBP4-213ENST00000602088 DDX50Q9BQ39 737 aaKnown RBP17.37■□□□□ 0.37
SSBP4-213ENST00000602088 EDEM3Q9BZQ6 932 aa17.37■□□□□ 0.37
SSBP4-213ENST00000602088 TTYH3Q9C0H2 523 aa17.37■□□□□ 0.37
SSBP4-213ENST00000602088 FAM204AQ9H8W3 233 aa17.37■□□□□ 0.37
SSBP4-213ENST00000602088 DDIT4Q9NX09 232 aa17.37■□□□□ 0.37
SSBP4-213ENST00000602088 RRN3Q9NYV6 651 aa17.37■□□□□ 0.37
SSBP4-213ENST00000602088 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.37■□□□□ 0.377e-6■■■■■ 33.6
SSBP4-213ENST00000602088 RIF1Q5UIP0 2472 aaKnown RBP17.36■□□□□ 0.37
SSBP4-213ENST00000602088 GOLGA8SH3BPF8 625 aa17.36■□□□□ 0.37
SSBP4-213ENST00000602088 SGK1O00141 431 aa17.36■□□□□ 0.37
SSBP4-213ENST00000602088 MOCS2O96007 188 aaPredicted RBP17.36■□□□□ 0.37
SSBP4-213ENST00000602088 SLC2A3P11169 496 aa17.36■□□□□ 0.37
SSBP4-213ENST00000602088 PBX1P40424 430 aa17.36■□□□□ 0.37
SSBP4-213ENST00000602088 PXNP49023 591 aaPredicted RBP17.36■□□□□ 0.37
SSBP4-213ENST00000602088 SGSHP51688 502 aa17.36■□□□□ 0.37
SSBP4-213ENST00000602088 CENPCQ03188 943 aa17.36■□□□□ 0.37
SSBP4-213ENST00000602088 CRY1Q16526 586 aa17.36■□□□□ 0.37
SSBP4-213ENST00000602088 CLEC16AQ2KHT3 1053 aa17.36■□□□□ 0.37
SSBP4-213ENST00000602088 FIGNQ5HY92 759 aa17.36■□□□□ 0.37
SSBP4-213ENST00000602088 RNF43Q68DV7 783 aa17.36■□□□□ 0.37
SSBP4-213ENST00000602088 MMS22LQ6ZRQ5 1243 aa17.36■□□□□ 0.37
SSBP4-213ENST00000602088 WDR5BQ86VZ2 330 aa17.36■□□□□ 0.37
SSBP4-213ENST00000602088 ZNF513Q8N8E2 541 aaPredicted RBP17.36■□□□□ 0.37
SSBP4-213ENST00000602088 BTN2A3PQ96KV6 586 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms