RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 WHRNQ9P202 907 aa18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 MAGED2Q9UNF1 606 aaPredicted RBP18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 LZTS1Q9Y250 596 aa18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 RWDD3Q9Y3V2 267 aa18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 I6L893 689 aaPredicted RBP18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 TEX28O15482 410 aa18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 CREB3O43889 395 aa18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 CXCL14O95715 111 aa18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 RBP3P10745 1247 aa18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 SLC2A3P11169 496 aa18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 ITIH2P19823 946 aa18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 KLRC2P26717 231 aa18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 ZNF276Q8N554 614 aa18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 TMEM121Q9BTD3 319 aa18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 ARHGEF4Q9NR80 690 aa18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 NUDT5Q9UKK9 219 aa18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 TLR6Q9Y2C9 796 aa18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 YIPF1Q9Y548 306 aa18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 KIAA1671Q9BY89 1806 aa18.27■□□□□ 0.52
SHKBP1-224ENST00000600718 SGK1O00141 431 aa18.27■□□□□ 0.52
SHKBP1-224ENST00000600718 PRRG1O14668 218 aa18.27■□□□□ 0.52
SHKBP1-224ENST00000600718 FAM153BP0C7A2 387 aa18.27■□□□□ 0.52
SHKBP1-224ENST00000600718 STIP1P31948 543 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-224ENST00000600718 ADCY8P40145 1251 aa18.27■□□□□ 0.52
SHKBP1-224ENST00000600718 CALCOCO2Q13137 446 aa18.27■□□□□ 0.52
SHKBP1-224ENST00000600718 CASP8Q14790 479 aa18.27■□□□□ 0.52
SHKBP1-224ENST00000600718 VEPH1Q14D04 833 aa18.27■□□□□ 0.52
SHKBP1-224ENST00000600718 FAM153CQ494X1 144 aa18.27■□□□□ 0.52
SHKBP1-224ENST00000600718 RFX8Q6ZV50 586 aa18.27■□□□□ 0.52
SHKBP1-224ENST00000600718 BZW1Q7L1Q6 419 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-224ENST00000600718 BBOF1Q8ND07 529 aa18.27■□□□□ 0.52
SHKBP1-224ENST00000600718 RSAD2Q8WXG1 361 aa18.27■□□□□ 0.52
SHKBP1-224ENST00000600718 SNF8Q96H20 258 aa18.27■□□□□ 0.52
SHKBP1-224ENST00000600718 CDK5RAP1Q96SZ6 601 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-224ENST00000600718 EPAS1Q99814 870 aa18.27■□□□□ 0.52
SHKBP1-224ENST00000600718 NEUROG2Q9H2A3 272 aa18.27■□□□□ 0.52
SHKBP1-224ENST00000600718 ZDHHC18Q9NUE0 388 aa18.27■□□□□ 0.52
SHKBP1-224ENST00000600718 OR12D3Q9UGF7 316 aa18.27■□□□□ 0.52
SHKBP1-224ENST00000600718 FAM153AQ9UHL3 310 aa18.27■□□□□ 0.52
SHKBP1-224ENST00000600718 HEY1Q9Y5J3 304 aa18.27■□□□□ 0.52
SHKBP1-224ENST00000600718 LCHNA4D1U4 455 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 MAP2K7O14733 419 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 IVDP26440 423 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 XRCC4Q13426 336 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 DPYSQ14117 519 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 TRIP13Q15645 432 aaPredicted RBP18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 SNX30Q5VWJ9 437 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 NCBP2-AS2Q69YL0 99 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 DARS2Q6PI48 645 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 TMC7Q7Z402 723 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 ART4Q93070 314 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 MYRFLQ96LU7 910 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 KCNU1A8MYU2 1149 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 FAM72CH0Y354 149 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 H7C0C1 242 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 MSI1O43347 362 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 CNPP09543 421 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 HMGA1P17096 107 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 CTNNB1P35222 781 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 ATP5OP48047 213 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 PLTPP55058 493 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 TPI1P60174 286 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 CAV1Q03135 178 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 TAF12Q16514 161 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 FAM72AQ5TYM5 149 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 FAM72DQ6L9T8 149 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 ZDHHC24Q6UX98 284 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 TADA2BQ86TJ2 420 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 FAM72BQ86X60 149 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 TRMT2BQ96GJ1 504 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 SLC39A13Q96H72 371 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 PCDH9Q9HC56 1237 aa18.26■□□□□ 0.51
SHKBP1-224ENST00000600718 MYO16Q9Y6X6 1858 aa18.25■□□□□ 0.51
SHKBP1-224ENST00000600718 BCLAF3A2AJT9 711 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-224ENST00000600718 CFAP69A5D8W1 941 aa18.25■□□□□ 0.51
SHKBP1-224ENST00000600718 HTR7P34969 479 aa18.25■□□□□ 0.51
SHKBP1-224ENST00000600718 CA8P35219 290 aa18.25■□□□□ 0.51
SHKBP1-224ENST00000600718 EPHB3P54753 998 aa18.25■□□□□ 0.51
SHKBP1-224ENST00000600718 TBX4P57082 545 aa18.25■□□□□ 0.51
SHKBP1-224ENST00000600718 EFEMP1Q12805 493 aa18.25■□□□□ 0.51
SHKBP1-224ENST00000600718 PAFAH1B3Q15102 231 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-224ENST00000600718 TRIP4Q15650 581 aaPredicted RBP18.25■□□□□ 0.51
SHKBP1-224ENST00000600718 C10orf120Q5SQS8 335 aa18.25■□□□□ 0.51
SHKBP1-224ENST00000600718 ZC3H18Q86VM9 953 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-224ENST00000600718 GDAP1L1Q96MZ0 367 aa18.25■□□□□ 0.51
SHKBP1-224ENST00000600718 FMO2Q99518 471 aa18.25■□□□□ 0.51
SHKBP1-224ENST00000600718 MARCH2Q9P0N8 246 aa18.25■□□□□ 0.51
SHKBP1-224ENST00000600718 LINC01553A4QN01 128 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 DCLK1O15075 740 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 KPNA1P52294 538 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 GBE1Q04446 702 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 PLD1Q13393 1074 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 PDZD4Q76G19 769 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 UNC45BQ8IWX7 931 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 MREGQ8N565 214 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 FBXO25Q8TCJ0 367 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 LRRC45Q96CN5 670 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 FCRL2Q96LA5 508 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 ZNF512Q96ME7 567 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 VIPAS39Q9H9C1 493 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms