RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 RNF217Q8TC41 542 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 AGAP11Q8TF27 550 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 RNF139Q8WU17 664 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 HTR3CQ8WXA8 447 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 SRPK1Q96SB4 655 aaKnown RBP11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 PRDM12Q9H4Q4 367 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 RXFP1Q9HBX9 757 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 NMRK2Q9NPI5 230 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 MORF4L1Q9UBU8 362 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 YJEFN3A6XGL0 299 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 E7ENQ6 273 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 SLC45A4Q5BKX6 768 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 ADGRD1Q6QNK2 874 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 RILPQ96NA2 401 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 SMYD2Q9NRG4 433 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 EURLQ9NYK6 297 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 CHKBQ9Y259 395 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 SLC15A5A6NIM6 579 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 FAM72CH0Y354 149 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 TYROBPO43914 113 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 EDF1O60869 148 aaKnown RBP11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 VAV1P15498 845 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 NPR3P17342 541 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 TGM2P21980 687 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 LACTB2Q53H82 288 aaPredicted RBP11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 ANKRD20A2Q5SQ80 823 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 FAM72AQ5TYM5 149 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 ANKRD20A1Q5TYW2 823 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 ANKRD20A3Q5VUR7 823 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 FAM72DQ6L9T8 149 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 GPRIN1Q7Z2K8 1008 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 SLC26A11Q86WA9 606 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 FAM72BQ86X60 149 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 NT5DC4Q86YG4 428 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 RELL1Q8IUW5 271 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 SMG8Q8ND04 991 aaKnown RBP11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 MIEF2Q96C03 454 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 SYT15Q9BQS2 421 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 PIGVQ9NUD9 493 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 DONSONQ9NYP3 566 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 HEY2Q9UBP5 337 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 TEX264Q9Y6I9 313 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 USH1CQ9Y6N9 552 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 NDC80O14777 642 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 STK10O94804 968 aaKnown RBP11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 BDNFP23560 247 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 PGGT1BP53609 377 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 CACNA2D1P54289 1103 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 NBPF20Q3BBV1 942 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 EFHC1Q5JVL4 640 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 SLC26A9Q7LBE3 791 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 UNC93AQ86WB7 457 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 SCN4BQ8IWT1 228 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 EMID1Q96A84 441 aaPredicted RBP11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 ZNF670Q9BS34 389 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 UNKQ9C0B0 810 aaKnown RBP11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 VPS11Q9H270 941 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 ARHGEF4Q9NR80 690 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 MIOSQ9NXC5 875 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 CNTN3Q9P232 1028 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 ACTL7BQ9Y614 415 aa11.9□□□□□ -0.5
ARHGEF1-220ENST00000600274 ATXN2Q99700 1313 aaKnown RBP11.9□□□□□ -0.51
ARHGEF1-220ENST00000600274 MKI67P46013 3256 aaKnown RBP11.9□□□□□ -0.51
ARHGEF1-220ENST00000600274 RBM47A0AV96 593 aaKnown RBP11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 F8W810 466 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 PTGESO14684 152 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 ZWINTO95229 277 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 ERVK-10P10266 1014 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 CD52P31358 61 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 MATKP42679 507 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 TPI1P60174 286 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 CHI3L2Q15782 390 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 PKDCCQ504Y2 493 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 UBXN11Q5T124 520 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 NCBP2-AS2Q69YL0 99 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 ARID3BQ8IVW6 561 aaPredicted RBP11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 DENND1AQ8TEH3 1009 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 WNT8BQ93098 351 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 P2RY11Q96G91 374 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 ARHGAP39Q9C0H5 1083 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 STAP1Q9ULZ2 295 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 SLC12A4Q9UP95 1085 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 FAM237BA0A1B0GVD1 139 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 DCAF8L1A6NGE4 600 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 PIRO00625 290 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 CHADO15335 359 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 PRPF4O43172 522 aaKnown RBP eCLIP11.89□□□□□ -0.512e-6■■■■□ 22.5
ARHGEF1-220ENST00000600274 THP07101 528 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 SNRPAP09012 282 aaKnown RBP11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 EPHB2P29323 1055 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 ARFIP2P53365 341 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 ARPP19P56211 112 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 TRIM32Q13049 653 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 ZBTB6Q15916 424 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 PRR11Q96HE9 360 aaPredicted RBP11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 TRIM55Q9BYV6 548 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 FRMD8P1Q9BZ68 369 aaPredicted RBP11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 NOP53Q9NZM5 478 aaKnown RBP11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 GNEQ9Y223 722 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms