RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 GABRB2P47870 512 aa29.3■■■□□ 2.28
SSBP4-206ENST00000599699 FNTBP49356 437 aa29.3■■■□□ 2.28
SSBP4-206ENST00000599699 PITX1P78337 314 aaPredicted RBP29.3■■■□□ 2.28
SSBP4-206ENST00000599699 DMWDQ09019 674 aa29.3■■■□□ 2.28
SSBP4-206ENST00000599699 NR1I3Q14994 352 aa29.3■■■□□ 2.28
SSBP4-206ENST00000599699 C2CD6Q53TS8 623 aa29.3■■■□□ 2.28
SSBP4-206ENST00000599699 ZC3H12AQ5D1E8 599 aaKnown RBP29.3■■■□□ 2.28
SSBP4-206ENST00000599699 FAM102AQ5T9C2 384 aaPredicted RBP29.3■■■□□ 2.28
SSBP4-206ENST00000599699 ALLCQ8N6M5 410 aa29.3■■■□□ 2.28
SSBP4-206ENST00000599699 ZBTB44Q8NCP5 570 aa29.3■■■□□ 2.28
SSBP4-206ENST00000599699 NELL1Q92832 810 aa29.3■■■□□ 2.28
SSBP4-206ENST00000599699 RNF34Q969K3 372 aa29.3■■■□□ 2.28
SSBP4-206ENST00000599699 SLC39A13Q96H72 371 aa29.3■■■□□ 2.28
SSBP4-206ENST00000599699 DDX50Q9BQ39 737 aaKnown RBP29.3■■■□□ 2.28
SSBP4-206ENST00000599699 DDIT4Q9NX09 232 aa29.3■■■□□ 2.28
SSBP4-206ENST00000599699 GOLGA6L7A0A1B0GV03 622 aa29.29■■■□□ 2.28
SSBP4-206ENST00000599699 GOLGA8SH3BPF8 625 aa29.29■■■□□ 2.28
SSBP4-206ENST00000599699 KLF8O95600 359 aaPredicted RBP29.29■■■□□ 2.28
SSBP4-206ENST00000599699 FERP16591 822 aa29.29■■■□□ 2.28
SSBP4-206ENST00000599699 HOXC13P31276 330 aa29.29■■■□□ 2.28
SSBP4-206ENST00000599699 RFWD3Q6PCD5 774 aa29.29■■■□□ 2.28
SSBP4-206ENST00000599699 XYLT1Q86Y38 959 aa29.29■■■□□ 2.28
SSBP4-206ENST00000599699 ZNF397Q8NF99 534 aaPredicted RBP29.29■■■□□ 2.28
SSBP4-206ENST00000599699 AZIN2Q96A70 460 aa29.29■■■□□ 2.28
SSBP4-206ENST00000599699 HHIPQ96QV1 700 aa29.29■■■□□ 2.28
SSBP4-206ENST00000599699 SEMA4AQ9H3S1 761 aa29.29■■■□□ 2.28
SSBP4-206ENST00000599699 CYP1A1P04798 512 aaPredicted RBP29.28■■■□□ 2.28
SSBP4-206ENST00000599699 CISD3P0C7P0 127 aa29.28■■■□□ 2.28
SSBP4-206ENST00000599699 KIR2DL1P43626 348 aaPredicted RBP29.28■■■□□ 2.28
SSBP4-206ENST00000599699 PXNP49023 591 aaPredicted RBP29.28■■■□□ 2.28
SSBP4-206ENST00000599699 UBASH3AP57075 661 aa29.28■■■□□ 2.28
SSBP4-206ENST00000599699 MMS22LQ6ZRQ5 1243 aa29.28■■■□□ 2.28
SSBP4-206ENST00000599699 ZNF513Q8N8E2 541 aaPredicted RBP29.28■■■□□ 2.28
SSBP4-206ENST00000599699 TXNDC5Q8NBS9 432 aaKnown RBP29.28■■■□□ 2.28
SSBP4-206ENST00000599699 SLC30A5Q8TAD4 765 aa29.28■■■□□ 2.28
SSBP4-206ENST00000599699 TSPY26PQ9H489 355 aa29.28■■■□□ 2.28
SSBP4-206ENST00000599699 ZDHHC4Q9NPG8 344 aa29.28■■■□□ 2.28
SSBP4-206ENST00000599699 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP29.28■■■□□ 2.28
SSBP4-206ENST00000599699 FBXO10Q9UK96 956 aa29.28■■■□□ 2.28
SSBP4-206ENST00000599699 MMP17Q9ULZ9 603 aa29.28■■■□□ 2.28
SSBP4-206ENST00000599699 IGLV3-25P01717 112 aa29.27■■■□□ 2.28
SSBP4-206ENST00000599699 NOS2P35228 1153 aa29.27■■■□□ 2.28
SSBP4-206ENST00000599699 NME3Q13232 169 aa29.27■■■□□ 2.28
SSBP4-206ENST00000599699 FAM133BQ5BKY9 247 aaKnown RBP29.27■■■□□ 2.28
SSBP4-206ENST00000599699 LONP2Q86WA8 852 aa29.27■■■□□ 2.28
SSBP4-206ENST00000599699 IL17RCQ8NAC3 791 aa29.27■■■□□ 2.28
SSBP4-206ENST00000599699 AGPAT1Q99943 283 aa29.27■■■□□ 2.28
SSBP4-206ENST00000599699 SLC12A6Q9UHW9 1150 aa29.27■■■□□ 2.28
SSBP4-206ENST00000599699 MYO6Q9UM54 1294 aa29.27■■■□□ 2.28
SSBP4-206ENST00000599699 ZFHX2Q9C0A1 2572 aaPredicted RBP29.26■■■□□ 2.28
SSBP4-206ENST00000599699 GFRA3O60609 400 aa29.26■■■□□ 2.27
SSBP4-206ENST00000599699 SLC2A3P11169 496 aa29.26■■■□□ 2.27
SSBP4-206ENST00000599699 HOXA6P31267 233 aa29.26■■■□□ 2.27
SSBP4-206ENST00000599699 SLC6A4P31645 630 aa29.26■■■□□ 2.27
SSBP4-206ENST00000599699 SCNN1AP37088 669 aa29.26■■■□□ 2.27
SSBP4-206ENST00000599699 MATKP42679 507 aa29.26■■■□□ 2.27
SSBP4-206ENST00000599699 NSFP46459 744 aaKnown RBP29.26■■■□□ 2.27
SSBP4-206ENST00000599699 HSF5Q4G112 596 aaPredicted RBP29.26■■■□□ 2.27
SSBP4-206ENST00000599699 NADSYN1Q6IA69 706 aa29.26■■■□□ 2.27
SSBP4-206ENST00000599699 TRMT11Q7Z4G4 463 aaKnown RBP29.26■■■□□ 2.27
SSBP4-206ENST00000599699 CAMKK1Q8N5S9 505 aa29.26■■■□□ 2.27
SSBP4-206ENST00000599699 ATP6V0D2Q8N8Y2 350 aa29.26■■■□□ 2.27
SSBP4-206ENST00000599699 TSTD1Q8NFU3 115 aa29.26■■■□□ 2.27
SSBP4-206ENST00000599699 KCNV2Q8TDN2 545 aa29.26■■■□□ 2.27
SSBP4-206ENST00000599699 BAP1Q92560 729 aa29.26■■■□□ 2.27
SSBP4-206ENST00000599699 PCDHB18PQ96TA0 734 aa29.26■■■□□ 2.27
SSBP4-206ENST00000599699 SLC2A11Q9BYW1 496 aa29.26■■■□□ 2.27
SSBP4-206ENST00000599699 SLTMQ9NWH9 1034 aaKnown RBP eCLIP29.26■■■□□ 2.27
SSBP4-206ENST00000599699 STAP1Q9ULZ2 295 aa29.26■■■□□ 2.27
SSBP4-206ENST00000599699 KIAA1549LQ6ZVL6 1849 aa29.26■■■□□ 2.27
SSBP4-206ENST00000599699 TYW5A2RUC4 315 aaKnown RBP29.25■■■□□ 2.27
SSBP4-206ENST00000599699 LRRC53A6NM62 1247 aa29.25■■■□□ 2.27
SSBP4-206ENST00000599699 PRRT4C9JH25 899 aa29.25■■■□□ 2.27
SSBP4-206ENST00000599699 M0QYT0 321 aa29.25■■■□□ 2.27
SSBP4-206ENST00000599699 TBL1XO60907 577 aa29.25■■■□□ 2.27
SSBP4-206ENST00000599699 APBB3O95704 486 aa29.25■■■□□ 2.27
SSBP4-206ENST00000599699 LMNAP02545 664 aaKnown RBP29.25■■■□□ 2.27
SSBP4-206ENST00000599699 ABCB4P21439 1286 aa29.25■■■□□ 2.27
SSBP4-206ENST00000599699 MMP8P22894 467 aa29.25■■■□□ 2.27
SSBP4-206ENST00000599699 HOXD9P28356 352 aaPredicted RBP29.25■■■□□ 2.27
SSBP4-206ENST00000599699 CCR1P32246 355 aa29.25■■■□□ 2.27
SSBP4-206ENST00000599699 SGSHP51688 502 aa29.25■■■□□ 2.27
SSBP4-206ENST00000599699 EOGTQ5NDL2 527 aa29.25■■■□□ 2.27
SSBP4-206ENST00000599699 PIK3R6Q5UE93 754 aa29.25■■■□□ 2.27
SSBP4-206ENST00000599699 BTN2A3PQ96KV6 586 aa29.25■■■□□ 2.27
SSBP4-206ENST00000599699 C11orf70Q9BRQ4 267 aa29.25■■■□□ 2.27
SSBP4-206ENST00000599699 RRN3Q9NYV6 651 aa29.25■■■□□ 2.27
SSBP4-206ENST00000599699 STIM2Q9P246 746 aa29.25■■■□□ 2.27
SSBP4-206ENST00000599699 XPO7Q9UIA9 1087 aaKnown RBP29.25■■■□□ 2.27
SSBP4-206ENST00000599699 CLEC4EQ9ULY5 219 aa29.25■■■□□ 2.27
SSBP4-206ENST00000599699 SLC27A6Q9Y2P4 619 aa29.25■■■□□ 2.27
SSBP4-206ENST00000599699 VPS13AQ96RL7 3174 aa29.24■■■□□ 2.27
SSBP4-206ENST00000599699 PRR23AA6NEV1 266 aa29.24■■■□□ 2.27
SSBP4-206ENST00000599699 SGK1O00141 431 aa29.24■■■□□ 2.27
SSBP4-206ENST00000599699 GFRA2O00451 464 aa29.24■■■□□ 2.27
SSBP4-206ENST00000599699 LILRB5O75023 590 aa29.24■■■□□ 2.27
SSBP4-206ENST00000599699 SULT1E1P49888 294 aa29.24■■■□□ 2.27
SSBP4-206ENST00000599699 ASIC2Q16515 512 aa29.24■■■□□ 2.27
SSBP4-206ENST00000599699 CLEC16AQ2KHT3 1053 aa29.24■■■□□ 2.27
SSBP4-206ENST00000599699 LRSAM1Q6UWE0 723 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms