RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 NAA35Q5VZE5 725 aa17.4■□□□□ 0.38
SSBP4-204ENST00000597724 XYLT1Q86Y38 959 aa17.4■□□□□ 0.38
SSBP4-204ENST00000597724 DDI1Q8WTU0 396 aa17.4■□□□□ 0.38
SSBP4-204ENST00000597724 ATRIPQ8WXE1 791 aa17.4■□□□□ 0.38
SSBP4-204ENST00000597724 ACDQ96AP0 544 aa17.4■□□□□ 0.38
SSBP4-204ENST00000597724 SEMA4AQ9H3S1 761 aa17.4■□□□□ 0.38
SSBP4-204ENST00000597724 POLR3BQ9NW08 1133 aaPredicted RBP17.4■□□□□ 0.38
SSBP4-204ENST00000597724 MYO6Q9UM54 1294 aa17.4■□□□□ 0.38
SSBP4-204ENST00000597724 SLC8A2Q9UPR5 921 aa17.4■□□□□ 0.38
SSBP4-204ENST00000597724 SLC27A6Q9Y2P4 619 aa17.4■□□□□ 0.38
SSBP4-204ENST00000597724 GOLGA6L7A0A1B0GV03 622 aa17.39■□□□□ 0.37
SSBP4-204ENST00000597724 FAM170AA1A519 330 aa17.39■□□□□ 0.37
SSBP4-204ENST00000597724 LILRB5O75023 590 aa17.39■□□□□ 0.37
SSBP4-204ENST00000597724 DAB1O75553 588 aa17.39■□□□□ 0.37
SSBP4-204ENST00000597724 NOS2P35228 1153 aa17.39■□□□□ 0.37
SSBP4-204ENST00000597724 SCNN1AP37088 669 aa17.39■□□□□ 0.37
SSBP4-204ENST00000597724 MRE11P49959 708 aa17.39■□□□□ 0.37
SSBP4-204ENST00000597724 DMWDQ09019 674 aa17.39■□□□□ 0.37
SSBP4-204ENST00000597724 DMC1Q14565 340 aa17.39■□□□□ 0.37
SSBP4-204ENST00000597724 C2CD6Q53TS8 623 aa17.39■□□□□ 0.37
SSBP4-204ENST00000597724 FAM133BQ5BKY9 247 aaKnown RBP17.39■□□□□ 0.37
SSBP4-204ENST00000597724 C10orf76Q5T2E6 689 aa17.39■□□□□ 0.37
SSBP4-204ENST00000597724 TRIM72Q6ZMU5 477 aa17.39■□□□□ 0.37
SSBP4-204ENST00000597724 CAMKK1Q8N5S9 505 aa17.39■□□□□ 0.37
SSBP4-204ENST00000597724 IL17RCQ8NAC3 791 aa17.39■□□□□ 0.37
SSBP4-204ENST00000597724 MSANTD4Q8NCY6 345 aa17.39■□□□□ 0.37
SSBP4-204ENST00000597724 KCNV2Q8TDN2 545 aa17.39■□□□□ 0.37
SSBP4-204ENST00000597724 BAP1Q92560 729 aa17.39■□□□□ 0.37
SSBP4-204ENST00000597724 NKD2Q969F2 451 aaPredicted RBP17.39■□□□□ 0.37
SSBP4-204ENST00000597724 TMA16Q96EY4 203 aaKnown RBP17.39■□□□□ 0.37
SSBP4-204ENST00000597724 PCDHB18PQ96TA0 734 aa17.39■□□□□ 0.37
SSBP4-204ENST00000597724 SLC2A11Q9BYW1 496 aa17.39■□□□□ 0.37
SSBP4-204ENST00000597724 IRX2Q9BZI1 471 aaPredicted RBP17.39■□□□□ 0.37
SSBP4-204ENST00000597724 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.39■□□□□ 0.371e-7■■■■□ 22.5
SSBP4-204ENST00000597724 MMP17Q9ULZ9 603 aa17.39■□□□□ 0.37
SSBP4-204ENST00000597724 STARD13Q9Y3M8 1113 aa17.39■□□□□ 0.37
SSBP4-204ENST00000597724 PRRT4C9JH25 899 aa17.38■□□□□ 0.37
SSBP4-204ENST00000597724 UNGP13051 313 aaPredicted RBP17.38■□□□□ 0.37
SSBP4-204ENST00000597724 FERP16591 822 aa17.38■□□□□ 0.37
SSBP4-204ENST00000597724 MMP8P22894 467 aa17.38■□□□□ 0.37
SSBP4-204ENST00000597724 HOXD11P31277 338 aaPredicted RBP17.38■□□□□ 0.37
SSBP4-204ENST00000597724 SLC6A4P31645 630 aa17.38■□□□□ 0.37
SSBP4-204ENST00000597724 TIE1P35590 1138 aa17.38■□□□□ 0.37
SSBP4-204ENST00000597724 FNTBP49356 437 aa17.38■□□□□ 0.37
SSBP4-204ENST00000597724 HSF5Q4G112 596 aaPredicted RBP17.38■□□□□ 0.37
SSBP4-204ENST00000597724 ZC3H12AQ5D1E8 599 aaKnown RBP17.38■□□□□ 0.37
SSBP4-204ENST00000597724 FAM102AQ5T9C2 384 aaPredicted RBP17.38■□□□□ 0.37
SSBP4-204ENST00000597724 PIK3R6Q5UE93 754 aa17.38■□□□□ 0.37
SSBP4-204ENST00000597724 NADSYN1Q6IA69 706 aa17.38■□□□□ 0.37
SSBP4-204ENST00000597724 RFWD3Q6PCD5 774 aa17.38■□□□□ 0.37
SSBP4-204ENST00000597724 IRF2BP2Q7Z5L9 587 aa17.38■□□□□ 0.37
SSBP4-204ENST00000597724 ALYREFQ86V81 257 aaKnown RBP17.38■□□□□ 0.37
SSBP4-204ENST00000597724 LONP2Q86WA8 852 aa17.38■□□□□ 0.37
SSBP4-204ENST00000597724 CCDC33Q8N5R6 958 aa17.38■□□□□ 0.37
SSBP4-204ENST00000597724 ALLCQ8N6M5 410 aa17.38■□□□□ 0.37
SSBP4-204ENST00000597724 HCN2Q9UL51 889 aa17.38■□□□□ 0.37
SSBP4-204ENST00000597724 CLEC4EQ9ULY5 219 aa17.38■□□□□ 0.37
SSBP4-204ENST00000597724 MYO18AQ92614 2054 aaKnown RBP17.38■□□□□ 0.37
SSBP4-204ENST00000597724 CCDC163A0A0D9SF12 145 aa17.37■□□□□ 0.37
SSBP4-204ENST00000597724 PRR23AA6NEV1 266 aa17.37■□□□□ 0.37
SSBP4-204ENST00000597724 KLF8O95600 359 aaPredicted RBP17.37■□□□□ 0.37
SSBP4-204ENST00000597724 APOEP02649 317 aa17.37■□□□□ 0.37
SSBP4-204ENST00000597724 CCDC172P0C7W6 258 aa17.37■□□□□ 0.37
SSBP4-204ENST00000597724 HOXD9P28356 352 aaPredicted RBP17.37■□□□□ 0.37
SSBP4-204ENST00000597724 GBP1P32455 592 aa17.37■□□□□ 0.37
SSBP4-204ENST00000597724 MATKP42679 507 aa17.37■□□□□ 0.37
SSBP4-204ENST00000597724 UBASH3AP57075 661 aa17.37■□□□□ 0.37
SSBP4-204ENST00000597724 RNASE9P60153 205 aaKnown RBP17.37■□□□□ 0.37
SSBP4-204ENST00000597724 MPP7Q5T2T1 576 aa17.37■□□□□ 0.37
SSBP4-204ENST00000597724 HEATR6Q6AI08 1181 aaKnown RBP17.37■□□□□ 0.37
SSBP4-204ENST00000597724 LRSAM1Q6UWE0 723 aa17.37■□□□□ 0.37
SSBP4-204ENST00000597724 ASCL5Q7RTU5 278 aa17.37■□□□□ 0.37
SSBP4-204ENST00000597724 TXNDC5Q8NBS9 432 aaKnown RBP17.37■□□□□ 0.37
SSBP4-204ENST00000597724 SLC30A5Q8TAD4 765 aa17.37■□□□□ 0.37
SSBP4-204ENST00000597724 NT5C3BQ969T7 300 aa17.37■□□□□ 0.37
SSBP4-204ENST00000597724 AGPAT1Q99943 283 aa17.37■□□□□ 0.37
SSBP4-204ENST00000597724 DDX50Q9BQ39 737 aaKnown RBP17.37■□□□□ 0.37
SSBP4-204ENST00000597724 EDEM3Q9BZQ6 932 aa17.37■□□□□ 0.37
SSBP4-204ENST00000597724 TTYH3Q9C0H2 523 aa17.37■□□□□ 0.37
SSBP4-204ENST00000597724 FAM204AQ9H8W3 233 aa17.37■□□□□ 0.37
SSBP4-204ENST00000597724 DDIT4Q9NX09 232 aa17.37■□□□□ 0.37
SSBP4-204ENST00000597724 RRN3Q9NYV6 651 aa17.37■□□□□ 0.37
SSBP4-204ENST00000597724 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.37■□□□□ 0.373e-6■■■■□ 24.8
SSBP4-204ENST00000597724 RIF1Q5UIP0 2472 aaKnown RBP17.36■□□□□ 0.37
SSBP4-204ENST00000597724 GOLGA8SH3BPF8 625 aa17.36■□□□□ 0.37
SSBP4-204ENST00000597724 SGK1O00141 431 aa17.36■□□□□ 0.37
SSBP4-204ENST00000597724 MOCS2O96007 188 aaPredicted RBP17.36■□□□□ 0.37
SSBP4-204ENST00000597724 SLC2A3P11169 496 aa17.36■□□□□ 0.37
SSBP4-204ENST00000597724 PBX1P40424 430 aa17.36■□□□□ 0.37
SSBP4-204ENST00000597724 PXNP49023 591 aaPredicted RBP17.36■□□□□ 0.37
SSBP4-204ENST00000597724 SGSHP51688 502 aa17.36■□□□□ 0.37
SSBP4-204ENST00000597724 CENPCQ03188 943 aa17.36■□□□□ 0.37
SSBP4-204ENST00000597724 CRY1Q16526 586 aa17.36■□□□□ 0.37
SSBP4-204ENST00000597724 CLEC16AQ2KHT3 1053 aa17.36■□□□□ 0.37
SSBP4-204ENST00000597724 FIGNQ5HY92 759 aa17.36■□□□□ 0.37
SSBP4-204ENST00000597724 RNF43Q68DV7 783 aa17.36■□□□□ 0.37
SSBP4-204ENST00000597724 MMS22LQ6ZRQ5 1243 aa17.36■□□□□ 0.37
SSBP4-204ENST00000597724 WDR5BQ86VZ2 330 aa17.36■□□□□ 0.37
SSBP4-204ENST00000597724 ZNF513Q8N8E2 541 aaPredicted RBP17.36■□□□□ 0.37
SSBP4-204ENST00000597724 BTN2A3PQ96KV6 586 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms