RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 FUKQ8N0W3 1084 aa14.45□□□□□ -0.1
SHKBP1-208ENST00000595726 RDH13Q8NBN7 331 aa14.45□□□□□ -0.1
SHKBP1-208ENST00000595726 OR2T3Q8NH03 318 aa14.45□□□□□ -0.1
SHKBP1-208ENST00000595726 SAP25Q8TEE9 199 aa14.45□□□□□ -0.1
SHKBP1-208ENST00000595726 UCMAQ8WVF2 138 aa14.45□□□□□ -0.1
SHKBP1-208ENST00000595726 SLC6A18Q96N87 628 aa14.45□□□□□ -0.1
SHKBP1-208ENST00000595726 ELF4Q99607 663 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-208ENST00000595726 TLR8Q9NR97 1041 aaKnown RBP14.45□□□□□ -0.1
SHKBP1-208ENST00000595726 SEL1LQ9UBV2 794 aa14.45□□□□□ -0.1
SHKBP1-208ENST00000595726 CFAP45Q9UL16 551 aa14.45□□□□□ -0.1
SHKBP1-208ENST00000595726 PCDHB13Q9Y5F0 798 aa14.45□□□□□ -0.1
SHKBP1-208ENST00000595726 USP9XQ93008 2570 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-208ENST00000595726 FAM47DPA6NHR8 397 aa14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 VILLO15195 856 aa14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 CYP26A1O43174 497 aa14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 STC2O76061 302 aa14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 IGHV4-34P06331 123 aa14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 DLATP10515 647 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 GAP43P17677 238 aa14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 MAP3K7CLP57077 242 aa14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 MYL6P60660 151 aa14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 GOLGA8FQ08AF8 430 aa14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 GOLGA8DPQ0D2H9 430 aa14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 BNIP3Q12983 259 aa14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 GPRIN1Q7Z2K8 1008 aa14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 WBP1Q96G27 269 aa14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 ACE2Q9BYF1 805 aaPredicted RBP14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 BTBD1Q9H0C5 482 aa14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 TNMDQ9H2S6 317 aa14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 CUEDC2Q9H467 287 aa14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 SMYD3Q9H7B4 428 aa14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 EBF2Q9HAK2 575 aa14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 CYLDQ9NQC7 956 aa14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 OLFML3Q9NRN5 406 aa14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 KRT82Q9NSB4 513 aa14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 KBTBD4Q9NVX7 518 aa14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 COMMD8Q9NX08 183 aa14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 PCDHA7Q9UN72 937 aa14.44□□□□□ -0.1
SHKBP1-208ENST00000595726 WNT9AO14904 365 aa14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 DFNA5O60443 496 aa14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 HMBSP08397 361 aa14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 FAM163BP0C2L3 166 aa14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 CDK4P11802 303 aa14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 RARGP13631 454 aa14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 CCDC130P13994 396 aa14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 IDEP14735 1019 aa14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 PLA2G4AP47712 749 aa14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 ME1P48163 572 aa14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 RPS14P62263 151 aaKnown RBP14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 CAMK2GQ13555 558 aaPredicted RBP14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 PKDCCQ504Y2 493 aa14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 KDM7AQ6ZMT4 941 aa14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 ANKS1BQ7Z6G8 1248 aa14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 ACOT1Q86TX2 421 aa14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 WDR49Q8IV35 697 aa14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 CYB5D2Q8WUJ1 264 aa14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 ZNF516Q92618 1163 aa14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 TTC9Q92623 222 aa14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 JAKMIP2Q96AA8 810 aa14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 DHX58Q96C10 678 aa14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 SMARCD1Q96GM5 515 aa14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 TRIM4Q9C037 500 aa14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 RCOR1Q9UKL0 485 aa14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 CLCA2Q9UQC9 943 aa14.43□□□□□ -0.1
SHKBP1-208ENST00000595726 ATP8B3O60423 1300 aa14.42□□□□□ -0.1
SHKBP1-208ENST00000595726 UTP20O75691 2785 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-208ENST00000595726 A0A1W2PQH9 124 aa14.42□□□□□ -0.1
SHKBP1-208ENST00000595726 TNNI1P19237 187 aa14.42□□□□□ -0.1
SHKBP1-208ENST00000595726 BCAT1P54687 386 aa14.42□□□□□ -0.1
SHKBP1-208ENST00000595726 TMPRSS3P57727 454 aa14.42□□□□□ -0.1
SHKBP1-208ENST00000595726 RACK1P63244 317 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-208ENST00000595726 INSM1Q01101 510 aaPredicted RBP14.42□□□□□ -0.1
SHKBP1-208ENST00000595726 ARID5AQ03989 594 aa14.42□□□□□ -0.1
SHKBP1-208ENST00000595726 SURF1Q15526 300 aa14.42□□□□□ -0.1
SHKBP1-208ENST00000595726 C10orf120Q5SQS8 335 aa14.42□□□□□ -0.1
SHKBP1-208ENST00000595726 RESP18Q5W5W9 173 aa14.42□□□□□ -0.1
SHKBP1-208ENST00000595726 IQUBQ8NA54 791 aa14.42□□□□□ -0.1
SHKBP1-208ENST00000595726 ZNF248Q8NDW4 579 aa14.42□□□□□ -0.1
SHKBP1-208ENST00000595726 CCDC127Q96BQ5 260 aa14.42□□□□□ -0.1
SHKBP1-208ENST00000595726 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.42□□□□□ -0.1
SHKBP1-208ENST00000595726 SDCBP2Q9H190 292 aa14.42□□□□□ -0.1
SHKBP1-208ENST00000595726 XYLT2Q9H1B5 865 aa14.42□□□□□ -0.1
SHKBP1-208ENST00000595726 FBXO44Q9H4M3 255 aa14.42□□□□□ -0.1
SHKBP1-208ENST00000595726 PANK4Q9NVE7 773 aa14.42□□□□□ -0.1
SHKBP1-208ENST00000595726 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.42□□□□□ -0.1
SHKBP1-208ENST00000595726 PCDHB1Q9Y5F3 818 aa14.42□□□□□ -0.1
SHKBP1-208ENST00000595726 CKAP5Q14008 2032 aa14.41□□□□□ -0.1
SHKBP1-208ENST00000595726 POLR2DO15514 142 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-208ENST00000595726 MPOP05164 745 aa14.41□□□□□ -0.1
SHKBP1-208ENST00000595726 FNDC3BQ53EP0 1204 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-208ENST00000595726 BROXQ5VW32 411 aa14.41□□□□□ -0.1
SHKBP1-208ENST00000595726 KIAA0895LQ68EN5 471 aa14.41□□□□□ -0.1
SHKBP1-208ENST00000595726 SCARA5Q6ZMJ2 495 aa14.41□□□□□ -0.1
SHKBP1-208ENST00000595726 PRICKLE2Q7Z3G6 844 aa14.41□□□□□ -0.1
SHKBP1-208ENST00000595726 DCBLD1Q8N8Z6 715 aa14.41□□□□□ -0.1
SHKBP1-208ENST00000595726 SLC2A14Q8TDB8 520 aa14.41□□□□□ -0.1
SHKBP1-208ENST00000595726 HPS3Q969F9 1004 aa14.41□□□□□ -0.1
SHKBP1-208ENST00000595726 HIC2Q96JB3 615 aa14.41□□□□□ -0.1
SHKBP1-208ENST00000595726 LRRC27Q9C0I9 530 aa14.41□□□□□ -0.1
SHKBP1-208ENST00000595726 TMEM245Q9H330 911 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms