RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-205ENST00000595081 CDC25BP30305 580 aa23.78■■□□□ 1.4
PNKP-205ENST00000595081 SLC11A2P49281 568 aa23.78■■□□□ 1.4
PNKP-205ENST00000595081 ATP11AP98196 1134 aa23.78■■□□□ 1.4
PNKP-205ENST00000595081 GAD2Q05329 585 aa23.78■■□□□ 1.4
PNKP-205ENST00000595081 DEUP1Q05D60 604 aa23.78■■□□□ 1.4
PNKP-205ENST00000595081 MAMLD1Q13495 774 aa23.78■■□□□ 1.4
PNKP-205ENST00000595081 C15orf59Q2T9L4 293 aaPredicted RBP23.78■■□□□ 1.4
PNKP-205ENST00000595081 CCDC14Q49A88 953 aa23.78■■□□□ 1.4
PNKP-205ENST00000595081 NADSYN1Q6IA69 706 aa23.78■■□□□ 1.4
PNKP-205ENST00000595081 C12orf40Q86WS4 652 aa23.78■■□□□ 1.4
PNKP-205ENST00000595081 FAM217AQ8IXS0 508 aa23.78■■□□□ 1.4
PNKP-205ENST00000595081 FBXL6Q8N531 539 aa23.78■■□□□ 1.4
PNKP-205ENST00000595081 SPC24Q8NBT2 197 aa23.78■■□□□ 1.4
PNKP-205ENST00000595081 CNOT8Q9UFF9 292 aaKnown RBP23.78■■□□□ 1.4
PNKP-205ENST00000595081 STOML2Q9UJZ1 356 aa23.78■■□□□ 1.4
PNKP-205ENST00000595081 MYOFQ9NZM1 2061 aa23.78■■□□□ 1.4
PNKP-205ENST00000595081 ZDBF2Q9HCK1 2354 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 FAM170BA6NMN3 283 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 NEDD8-MDP1E9PL57 170 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 HOXC11O43248 304 aaPredicted RBP23.77■■□□□ 1.4
PNKP-205ENST00000595081 PI15O43692 258 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 TSPAN3O60637 253 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 GPD1P21695 349 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 SDC4P31431 198 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 CCR1P32246 355 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 CHKAP35790 457 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 OPRD1P41143 372 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 AMPD2Q01433 879 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 SLC18A3Q16572 532 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 CDO1Q16878 200 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 RAB6CQ53S08 254 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 FAM133BQ5BKY9 247 aaKnown RBP23.77■■□□□ 1.4
PNKP-205ENST00000595081 ADGRF1Q5T601 910 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 SH3PXD2AQ5TCZ1 1133 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 PLEKHA7Q6IQ23 1121 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 DCUN1D2Q6PH85 259 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 CPXM2Q8N436 756 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 NAT16Q8N8M0 369 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 PJA1Q8NG27 643 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 TRIM11Q96F44 468 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 BBS2Q9BXC9 721 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 RAB6CQ9H0N0 254 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 FBRSL1Q9HCM7 1045 aaKnown RBP23.77■■□□□ 1.4
PNKP-205ENST00000595081 SPTLC3Q9NUV7 552 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 PARVAQ9NVD7 372 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.77■■□□□ 1.4
PNKP-205ENST00000595081 PLK2Q9NYY3 685 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 MARK1Q9P0L2 795 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 MYO1AQ9UBC5 1043 aa23.77■■□□□ 1.4
PNKP-205ENST00000595081 KCNU1A8MYU2 1149 aa23.76■■□□□ 1.39
PNKP-205ENST00000595081 AKR1B10O60218 316 aa23.76■■□□□ 1.39
PNKP-205ENST00000595081 TYRP14679 529 aa23.76■■□□□ 1.39
PNKP-205ENST00000595081 SLC6A4P31645 630 aa23.76■■□□□ 1.39
PNKP-205ENST00000595081 SLC6A11P48066 632 aa23.76■■□□□ 1.39
PNKP-205ENST00000595081 CXCR3P49682 368 aa23.76■■□□□ 1.39
PNKP-205ENST00000595081 GALK1P51570 392 aa23.76■■□□□ 1.39
PNKP-205ENST00000595081 PPP2R5DQ14738 602 aa23.76■■□□□ 1.39
PNKP-205ENST00000595081 ASTLQ6HA08 431 aaPredicted RBP23.76■■□□□ 1.39
PNKP-205ENST00000595081 RFWD3Q6PCD5 774 aa23.76■■□□□ 1.39
PNKP-205ENST00000595081 C1orf228Q6PIY5 440 aa23.76■■□□□ 1.39
PNKP-205ENST00000595081 BNIPLQ7Z465 357 aa23.76■■□□□ 1.39
PNKP-205ENST00000595081 CCDC105Q8IYK2 499 aa23.76■■□□□ 1.39
PNKP-205ENST00000595081 ZNF687Q8N1G0 1237 aa23.76■■□□□ 1.39
PNKP-205ENST00000595081 AZIN2Q96A70 460 aa23.76■■□□□ 1.39
PNKP-205ENST00000595081 PGAP3Q96FM1 320 aaPredicted RBP23.76■■□□□ 1.39
PNKP-205ENST00000595081 CCDC42Q96M95 316 aa23.76■■□□□ 1.39
PNKP-205ENST00000595081 P2RY13Q9BPV8 354 aa23.76■■□□□ 1.39
PNKP-205ENST00000595081 LRFN3Q9BTN0 628 aa23.76■■□□□ 1.39
PNKP-205ENST00000595081 THAP2Q9H0W7 228 aa23.76■■□□□ 1.39
PNKP-205ENST00000595081 MRPS17Q9Y2R5 130 aaKnown RBP23.76■■□□□ 1.39
PNKP-205ENST00000595081 ANKRD62A6NC57 917 aa23.75■■□□□ 1.39
PNKP-205ENST00000595081 DCNP07585 359 aaKnown RBP23.75■■□□□ 1.39
PNKP-205ENST00000595081 MYBL1P10243 752 aa23.75■■□□□ 1.39
PNKP-205ENST00000595081 SLC2A3P11169 496 aa23.75■■□□□ 1.39
PNKP-205ENST00000595081 RDXP35241 583 aaKnown RBP23.75■■□□□ 1.39
PNKP-205ENST00000595081 PTPN9P43378 593 aa23.75■■□□□ 1.39
PNKP-205ENST00000595081 SGSHP51688 502 aa23.75■■□□□ 1.39
PNKP-205ENST00000595081 OGDHQ02218 1023 aa23.75■■□□□ 1.39
PNKP-205ENST00000595081 FYB2Q5VWT5 728 aa23.75■■□□□ 1.39
PNKP-205ENST00000595081 SND1Q7KZF4 910 aaKnown RBP eCLIP23.75■■□□□ 1.39
PNKP-205ENST00000595081 ATP6V0D2Q8N8Y2 350 aa23.75■■□□□ 1.39
PNKP-205ENST00000595081 CD101Q93033 1021 aa23.75■■□□□ 1.39
PNKP-205ENST00000595081 MYEOVQ96EZ4 313 aa23.75■■□□□ 1.39
PNKP-205ENST00000595081 BTN2A3PQ96KV6 586 aa23.75■■□□□ 1.39
PNKP-205ENST00000595081 ANLNQ9NQW6 1124 aa23.75■■□□□ 1.39
PNKP-205ENST00000595081 SIT1Q9Y3P8 196 aa23.75■■□□□ 1.39
PNKP-205ENST00000595081 GFRA2O00451 464 aa23.74■■□□□ 1.39
PNKP-205ENST00000595081 F9P00740 461 aa23.74■■□□□ 1.39
PNKP-205ENST00000595081 AOC1P19801 751 aa23.74■■□□□ 1.39
PNKP-205ENST00000595081 CLCN5P51795 746 aa23.74■■□□□ 1.39
PNKP-205ENST00000595081 GALCP54803 685 aa23.74■■□□□ 1.39
PNKP-205ENST00000595081 MESP2Q0VG99 397 aa23.74■■□□□ 1.39
PNKP-205ENST00000595081 TMEM196Q5HYL7 178 aa23.74■■□□□ 1.39
PNKP-205ENST00000595081 RAP1GAP2Q684P5 730 aa23.74■■□□□ 1.39
PNKP-205ENST00000595081 FSTL4Q6MZW2 842 aa23.74■■□□□ 1.39
PNKP-205ENST00000595081 FAM131BQ86XD5 332 aa23.74■■□□□ 1.39
PNKP-205ENST00000595081 SUGP1Q8IWZ8 645 aaKnown RBP23.74■■□□□ 1.39
PNKP-205ENST00000595081 ETFBKMTQ8IXQ9 262 aa23.74■■□□□ 1.39
PNKP-205ENST00000595081 TMEM105Q8N8V8 129 aa23.74■■□□□ 1.39
PNKP-205ENST00000595081 FAM172AQ8WUF8 416 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms