RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 BRAFP15056 766 aa15.9■□□□□ 0.14
PNKP-204ENST00000594661 ATF2P15336 505 aa15.9■□□□□ 0.14
PNKP-204ENST00000594661 VPS41P49754 854 aa15.9■□□□□ 0.14
PNKP-204ENST00000594661 AFF1P51825 1210 aaKnown RBP15.9■□□□□ 0.14
PNKP-204ENST00000594661 GRM2Q14416 872 aa15.9■□□□□ 0.14
PNKP-204ENST00000594661 PPP1R21Q6ZMI0 780 aa15.9■□□□□ 0.14
PNKP-204ENST00000594661 FAM47EQ6ZV65 393 aa15.9■□□□□ 0.14
PNKP-204ENST00000594661 ACAD11Q709F0 780 aa15.9■□□□□ 0.14
PNKP-204ENST00000594661 TRMT10CQ7L0Y3 403 aaKnown RBP15.9■□□□□ 0.14
PNKP-204ENST00000594661 TTC30AQ86WT1 665 aa15.9■□□□□ 0.14
PNKP-204ENST00000594661 REM2Q8IYK8 340 aaPredicted RBP15.9■□□□□ 0.14
PNKP-204ENST00000594661 NIPA2Q8N8Q9 360 aa15.9■□□□□ 0.14
PNKP-204ENST00000594661 LPPQ93052 612 aa15.9■□□□□ 0.14
PNKP-204ENST00000594661 ABTB1Q969K4 478 aaPredicted RBP15.9■□□□□ 0.14
PNKP-204ENST00000594661 SLITRK1Q96PX8 696 aa15.9■□□□□ 0.14
PNKP-204ENST00000594661 PPP1R10Q96QC0 940 aaKnown RBP15.9■□□□□ 0.14
PNKP-204ENST00000594661 CFHR5Q9BXR6 569 aa15.9■□□□□ 0.14
PNKP-204ENST00000594661 CREBZFQ9NS37 354 aa15.9■□□□□ 0.14
PNKP-204ENST00000594661 GDAP2Q9NXN4 497 aa15.9■□□□□ 0.14
PNKP-204ENST00000594661 CACNG4Q9UBN1 327 aa15.9■□□□□ 0.14
PNKP-204ENST00000594661 TMEM247A6NEH6 219 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 A8MXQ7 604 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 TP73O15350 636 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 IGFBP6P24592 240 aaPredicted RBP15.89■□□□□ 0.13
PNKP-204ENST00000594661 PSMA2P25787 234 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 IVDP26440 423 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 CRABP2P29373 138 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 ADCY8P40145 1251 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 TAF6P49848 677 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 SERPINB8P50452 374 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 DSG1Q02413 1049 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 CYLC2Q14093 348 aaPredicted RBP15.89■□□□□ 0.13
PNKP-204ENST00000594661 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.89■□□□□ 0.13
PNKP-204ENST00000594661 PKDCCQ504Y2 493 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 LRRC38Q5VT99 294 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 MFSD7Q6UXD7 560 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 RGS9BPQ6ZS82 235 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 ALDH16A1Q8IZ83 802 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 PDCD7Q8N8D1 485 aaKnown RBP15.89■□□□□ 0.13
PNKP-204ENST00000594661 GSTCDQ8NEC7 633 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 ACSF2Q96CM8 615 aaPredicted RBP15.89■□□□□ 0.13
PNKP-204ENST00000594661 MCRS1Q96EZ8 462 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 ECSITQ9BQ95 431 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 TRMT13Q9NUP7 481 aaKnown RBP15.89■□□□□ 0.13
PNKP-204ENST00000594661 ANGPTL2Q9UKU9 493 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 E5RJQ4 531 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 ALDH2P05091 517 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 PDGFRBP09619 1106 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 CDK4P11802 303 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 CPA3P15088 417 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 LMO2P25791 158 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 CD52P31358 61 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 PNPLA4P41247 253 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 GRIA2P42262 883 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 RGS7P49802 495 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 ITGA8P53708 1063 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 HNRNPDQ14103 355 aaKnown RBP15.89■□□□□ 0.13
PNKP-204ENST00000594661 STILQ15468 1287 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 ADRM1Q16186 407 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 LONRF1Q17RB8 773 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 CTC1Q2NKJ3 1217 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 SLC45A4Q5BKX6 768 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 UNC93AQ86WB7 457 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 ARFGAP1Q8N6T3 406 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 ATP11CQ8NB49 1132 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 PCSK9Q8NBP7 692 aaKnown RBP15.89■□□□□ 0.13
PNKP-204ENST00000594661 C10orf82Q8WW14 230 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 STMN2Q93045 179 aa15.89■□□□□ 0.13
PNKP-204ENST00000594661 GFM2Q969S9 779 aaKnown RBP15.89■□□□□ 0.13
PNKP-204ENST00000594661 DGCR14Q96DF8 476 aaKnown RBP15.89■□□□□ 0.13
PNKP-204ENST00000594661 PIWIL1Q96J94 861 aaKnown RBP15.89■□□□□ 0.13
PNKP-204ENST00000594661 TRIM43BA6NCK2 446 aa15.88■□□□□ 0.13
PNKP-204ENST00000594661 MGEA5O60502 916 aa15.88■□□□□ 0.13
PNKP-204ENST00000594661 CCDC22O60826 627 aa15.88■□□□□ 0.13
PNKP-204ENST00000594661 TROVE2P10155 538 aaKnown RBP eCLIP15.88■□□□□ 0.13
PNKP-204ENST00000594661 PORP16435 677 aaPredicted RBP15.88■□□□□ 0.13
PNKP-204ENST00000594661 LRPAP1P30533 357 aa15.88■□□□□ 0.13
PNKP-204ENST00000594661 LILRA4P59901 499 aa15.88■□□□□ 0.13
PNKP-204ENST00000594661 ITGA7Q13683 1181 aa15.88■□□□□ 0.13
PNKP-204ENST00000594661 SV2CQ496J9 727 aa15.88■□□□□ 0.13
PNKP-204ENST00000594661 FAM102AQ5T9C2 384 aaPredicted RBP15.88■□□□□ 0.13
PNKP-204ENST00000594661 RHBDF2Q6PJF5 856 aa15.88■□□□□ 0.13
PNKP-204ENST00000594661 OLFML1Q6UWY5 402 aa15.88■□□□□ 0.13
PNKP-204ENST00000594661 B3GNT6Q6ZMB0 384 aa15.88■□□□□ 0.13
PNKP-204ENST00000594661 SPOCD1Q6ZMY3 1216 aa15.88■□□□□ 0.13
PNKP-204ENST00000594661 FAM183BPQ6ZVS7 135 aa15.88■□□□□ 0.13
PNKP-204ENST00000594661 GSTA5Q7RTV2 222 aa15.88■□□□□ 0.13
PNKP-204ENST00000594661 LIMS2Q7Z4I7 341 aa15.88■□□□□ 0.13
PNKP-204ENST00000594661 GAD1Q99259 594 aa15.88■□□□□ 0.13
PNKP-204ENST00000594661 BTBD10Q9BSF8 475 aa15.88■□□□□ 0.13
PNKP-204ENST00000594661 CHST12Q9NRB3 414 aa15.88■□□□□ 0.13
PNKP-204ENST00000594661 NKIRAS1Q9NYS0 192 aa15.88■□□□□ 0.13
PNKP-204ENST00000594661 PADI3Q9ULW8 664 aa15.88■□□□□ 0.13
PNKP-204ENST00000594661 GSC2O15499 205 aa15.88■□□□□ 0.13
PNKP-204ENST00000594661 RNASEH1O60930 286 aaKnown RBP15.88■□□□□ 0.13
PNKP-204ENST00000594661 LRCH4O75427 683 aa15.88■□□□□ 0.13
PNKP-204ENST00000594661 HOXD10P28358 340 aa15.88■□□□□ 0.13
PNKP-204ENST00000594661 CHKAP35790 457 aa15.88■□□□□ 0.13
PNKP-204ENST00000594661 ACLYP53396 1101 aa15.88■□□□□ 0.13
PNKP-204ENST00000594661 IL9RQ01113 521 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms