RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 OXTRP30559 389 aa16.64■□□□□ 0.25
GTF2F1-203ENST00000594213 TKTL1P51854 596 aa16.64■□□□□ 0.25
GTF2F1-203ENST00000594213 TRIP6Q15654 476 aaKnown RBP16.64■□□□□ 0.25
GTF2F1-203ENST00000594213 ZC3H3Q8IXZ2 948 aaKnown RBP16.64■□□□□ 0.25
GTF2F1-203ENST00000594213 SORCS1Q8WY21 1168 aa16.64■□□□□ 0.25
GTF2F1-203ENST00000594213 ZCCHC14Q8WYQ9 949 aaKnown RBP16.64■□□□□ 0.25
GTF2F1-203ENST00000594213 PLD4Q96BZ4 506 aa16.64■□□□□ 0.25
GTF2F1-203ENST00000594213 ULBP1Q9BZM6 244 aa16.64■□□□□ 0.25
GTF2F1-203ENST00000594213 TAF4O00268 1085 aa16.63■□□□□ 0.25
GTF2F1-203ENST00000594213 XPO1O14980 1071 aaKnown RBP16.63■□□□□ 0.25
GTF2F1-203ENST00000594213 SYNCRIPO60506 623 aaKnown RBP16.63■□□□□ 0.25
GTF2F1-203ENST00000594213 ZNF202O95125 648 aa16.63■□□□□ 0.25
GTF2F1-203ENST00000594213 CYBBP04839 570 aa16.63■□□□□ 0.25
GTF2F1-203ENST00000594213 HOXD9P28356 352 aaPredicted RBP16.63■□□□□ 0.25
GTF2F1-203ENST00000594213 PDE4CQ08493 712 aa16.63■□□□□ 0.25
GTF2F1-203ENST00000594213 E2F5Q15329 346 aa16.63■□□□□ 0.25
GTF2F1-203ENST00000594213 CBWD6Q4V339 395 aa16.63■□□□□ 0.25
GTF2F1-203ENST00000594213 CBWD3Q5JTY5 395 aa16.63■□□□□ 0.25
GTF2F1-203ENST00000594213 CBWD5Q5RIA9 395 aa16.63■□□□□ 0.25
GTF2F1-203ENST00000594213 RSRC2Q7L4I2 434 aaKnown RBP16.63■□□□□ 0.25
GTF2F1-203ENST00000594213 KIAA0907Q7Z7F0 614 aaPredicted RBP16.63■□□□□ 0.25
GTF2F1-203ENST00000594213 SMYD4Q8IYR2 804 aaPredicted RBP16.63■□□□□ 0.25
GTF2F1-203ENST00000594213 UBR7Q8N806 425 aa16.63■□□□□ 0.25
GTF2F1-203ENST00000594213 ADAMTS14Q8WXS8 1223 aa16.63■□□□□ 0.25
GTF2F1-203ENST00000594213 CETN3O15182 167 aa16.62■□□□□ 0.25
GTF2F1-203ENST00000594213 STX10O60499 249 aa16.62■□□□□ 0.25
GTF2F1-203ENST00000594213 RDXP35241 583 aaKnown RBP16.62■□□□□ 0.25
GTF2F1-203ENST00000594213 CAMK2GQ13555 558 aaPredicted RBP16.62■□□□□ 0.25
GTF2F1-203ENST00000594213 PKDCCQ504Y2 493 aa16.62■□□□□ 0.25
GTF2F1-203ENST00000594213 MPPE1Q53F39 396 aa16.62■□□□□ 0.25
GTF2F1-203ENST00000594213 DCAF12L1Q5VU92 463 aa16.62■□□□□ 0.25
GTF2F1-203ENST00000594213 DBX2Q6ZNG2 339 aa16.62■□□□□ 0.25
GTF2F1-203ENST00000594213 GLRX5Q86SX6 157 aa16.62■□□□□ 0.25
GTF2F1-203ENST00000594213 FMNL3Q8IVF7 1028 aa16.62■□□□□ 0.25
GTF2F1-203ENST00000594213 NAXDQ8IW45 347 aa16.62■□□□□ 0.25
GTF2F1-203ENST00000594213 SCML4Q8N228 414 aa16.62■□□□□ 0.25
GTF2F1-203ENST00000594213 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.62■□□□□ 0.25
GTF2F1-203ENST00000594213 DDI1Q8WTU0 396 aa16.62■□□□□ 0.25
GTF2F1-203ENST00000594213 PRCCQ92733 491 aaPredicted RBP16.62■□□□□ 0.25
GTF2F1-203ENST00000594213 NUP58Q9BVL2 599 aa16.62■□□□□ 0.25
GTF2F1-203ENST00000594213 CIPCQ9C0C6 399 aa16.62■□□□□ 0.25
GTF2F1-203ENST00000594213 TMEM245Q9H330 911 aa16.62■□□□□ 0.25
GTF2F1-203ENST00000594213 OLA1Q9NTK5 396 aaKnown RBP16.62■□□□□ 0.25
GTF2F1-203ENST00000594213 TSPAN16Q9UKR8 245 aa16.62■□□□□ 0.25
GTF2F1-203ENST00000594213 HBS1LQ9Y450 684 aaKnown RBP16.62■□□□□ 0.25
GTF2F1-203ENST00000594213 MYH10P35580 1976 aa16.61■□□□□ 0.25
GTF2F1-203ENST00000594213 MEI4A8MW99 385 aa16.61■□□□□ 0.25
GTF2F1-203ENST00000594213 GABBR2O75899 941 aa16.61■□□□□ 0.25
GTF2F1-203ENST00000594213 EPHX1P07099 455 aa16.61■□□□□ 0.25
GTF2F1-203ENST00000594213 ZNF883P0CG24 379 aa16.61■□□□□ 0.25
GTF2F1-203ENST00000594213 EPB41P11171 864 aaKnown RBP16.61■□□□□ 0.25
GTF2F1-203ENST00000594213 HLA-FP30511 346 aa16.61■□□□□ 0.25
GTF2F1-203ENST00000594213 BCAT1P54687 386 aa16.61■□□□□ 0.25
GTF2F1-203ENST00000594213 SLC8A3P57103 927 aa16.61■□□□□ 0.25
GTF2F1-203ENST00000594213 CUL2Q13617 745 aa16.61■□□□□ 0.25
GTF2F1-203ENST00000594213 GOLGA7BQ2TAP0 167 aa16.61■□□□□ 0.25
GTF2F1-203ENST00000594213 COBLL1Q53SF7 1204 aa16.61■□□□□ 0.25
GTF2F1-203ENST00000594213 BSPRYQ5W0U4 402 aa16.61■□□□□ 0.25
GTF2F1-203ENST00000594213 ADIPOR2Q86V24 386 aa16.61■□□□□ 0.25
GTF2F1-203ENST00000594213 ZCCHC9Q8N567 271 aaKnown RBP16.61■□□□□ 0.25
GTF2F1-203ENST00000594213 OR2T3Q8NH03 318 aa16.61■□□□□ 0.25
GTF2F1-203ENST00000594213 KCTD13Q8WZ19 329 aa16.61■□□□□ 0.25
GTF2F1-203ENST00000594213 SCAND2PQ9GZW5 306 aaPredicted RBP16.61■□□□□ 0.25
GTF2F1-203ENST00000594213 PCED1AQ9H1Q7 454 aa16.61■□□□□ 0.25
GTF2F1-203ENST00000594213 IL21RQ9HBE5 538 aa16.61■□□□□ 0.25
GTF2F1-203ENST00000594213 PCOLCE2Q9UKZ9 415 aa16.61■□□□□ 0.25
GTF2F1-203ENST00000594213 ADAMTS9Q9P2N4 1935 aa16.6■□□□□ 0.25
GTF2F1-203ENST00000594213 FASNP49327 2511 aaKnown RBP16.6■□□□□ 0.25
GTF2F1-203ENST00000594213 YJEFN3A6XGL0 299 aa16.6■□□□□ 0.25
GTF2F1-203ENST00000594213 E7ENQ6 273 aa16.6■□□□□ 0.25
GTF2F1-203ENST00000594213 O00370 1275 aa16.6■□□□□ 0.25
GTF2F1-203ENST00000594213 BCAT2O15382 392 aaPredicted RBP16.6■□□□□ 0.25
GTF2F1-203ENST00000594213 TSPAN3O60637 253 aa16.6■□□□□ 0.25
GTF2F1-203ENST00000594213 LATS1O95835 1130 aa16.6■□□□□ 0.25
GTF2F1-203ENST00000594213 FTH1P19P0C7X4 201 aa16.6■□□□□ 0.25
GTF2F1-203ENST00000594213 HLA-EP13747 358 aa16.6■□□□□ 0.25
GTF2F1-203ENST00000594213 PRCPP42785 496 aa16.6■□□□□ 0.25
GTF2F1-203ENST00000594213 HARS2P49590 506 aaKnown RBP16.6■□□□□ 0.25
GTF2F1-203ENST00000594213 BST2Q10589 180 aaKnown RBP16.6■□□□□ 0.25
GTF2F1-203ENST00000594213 SGO2Q562F6 1265 aa16.6■□□□□ 0.25
GTF2F1-203ENST00000594213 ADGRF1Q5T601 910 aa16.6■□□□□ 0.25
GTF2F1-203ENST00000594213 SERPINA13PQ6UXR4 307 aa16.6■□□□□ 0.25
GTF2F1-203ENST00000594213 SLCO6A1Q86UG4 719 aa16.6■□□□□ 0.25
GTF2F1-203ENST00000594213 WFIKKN2Q8TEU8 576 aa16.6■□□□□ 0.25
GTF2F1-203ENST00000594213 LRRC4Q9HBW1 653 aa16.6■□□□□ 0.25
GTF2F1-203ENST00000594213 SFMBT1Q9UHJ3 866 aa16.6■□□□□ 0.25
GTF2F1-203ENST00000594213 EIF2B4Q9UI10 523 aaKnown RBP16.6■□□□□ 0.25
GTF2F1-203ENST00000594213 SLCO1B1Q9Y6L6 691 aa16.6■□□□□ 0.25
GTF2F1-203ENST00000594213 CABIN1Q9Y6J0 2220 aa16.6■□□□□ 0.25
GTF2F1-203ENST00000594213 CEP192Q8TEP8 1941 aa16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 ITPR1Q14643 2758 aa16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 NBEAQ8NFP9 2946 aa16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 SLC16A3O15427 465 aaKnown RBP16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 ACADMP11310 421 aa16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 VDRP11473 427 aa16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 HOXB3P14651 431 aaPredicted RBP16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 PMS1P54277 932 aaKnown RBP16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 ZNF445P59923 1031 aa16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 ADIGQ0VDE8 80 aa16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 PTPRNQ16849 979 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms