RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 USP6NLQ92738 828 aa17.03■□□□□ 0.32
LIG1-206ENST00000594067 OTUD5Q96G74 571 aa17.03■□□□□ 0.32
LIG1-206ENST00000594067 ELP3Q9H9T3 547 aa17.03■□□□□ 0.32
LIG1-206ENST00000594067 PIH1D1Q9NWS0 290 aaKnown RBP17.03■□□□□ 0.32
LIG1-206ENST00000594067 SLC7A8Q9UHI5 535 aa17.03■□□□□ 0.32
LIG1-206ENST00000594067 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.02■□□□□ 0.32
LIG1-206ENST00000594067 DCAF8L1A6NGE4 600 aa17.02■□□□□ 0.32
LIG1-206ENST00000594067 A6NJR5 290 aa17.02■□□□□ 0.32
LIG1-206ENST00000594067 HCRTO43612 131 aa17.02■□□□□ 0.32
LIG1-206ENST00000594067 SNNO75324 88 aaPredicted RBP17.02■□□□□ 0.32
LIG1-206ENST00000594067 GCATO75600 419 aa17.02■□□□□ 0.32
LIG1-206ENST00000594067 CRADDP78560 199 aa17.02■□□□□ 0.32
LIG1-206ENST00000594067 UBAP2LQ14157 1087 aaKnown RBP17.02■□□□□ 0.32
LIG1-206ENST00000594067 KCTD2Q14681 263 aa17.02■□□□□ 0.32
LIG1-206ENST00000594067 TRMT5Q32P41 509 aaKnown RBP17.02■□□□□ 0.32
LIG1-206ENST00000594067 DENND5BQ6ZUT9 1274 aa17.02■□□□□ 0.32
LIG1-206ENST00000594067 TMEM110Q86TL2 294 aa17.02■□□□□ 0.32
LIG1-206ENST00000594067 ULK2Q8IYT8 1036 aa17.02■□□□□ 0.32
LIG1-206ENST00000594067 NETO2Q8NC67 525 aa17.02■□□□□ 0.32
LIG1-206ENST00000594067 MMP19Q99542 508 aa17.02■□□□□ 0.32
LIG1-206ENST00000594067 FAM192AQ9GZU8 254 aa17.02■□□□□ 0.32
LIG1-206ENST00000594067 PPP2R3BQ9Y5P8 575 aa17.02■□□□□ 0.32
LIG1-206ENST00000594067 CSADQ9Y600 493 aa17.02■□□□□ 0.32
LIG1-206ENST00000594067 A0A0G2JMZ2 1700 aa17.02■□□□□ 0.32
LIG1-206ENST00000594067 LRRC37A2A6NM11 1700 aa17.02■□□□□ 0.32
LIG1-206ENST00000594067 WDR27A2RRH5 827 aa17.02■□□□□ 0.31
LIG1-206ENST00000594067 SPECC1L-ADORA2AF8WAN1 911 aa17.02■□□□□ 0.31
LIG1-206ENST00000594067 ZCCHC18P0CG32 403 aa17.02■□□□□ 0.31
LIG1-206ENST00000594067 TPSB2P20231 275 aa17.02■□□□□ 0.31
LIG1-206ENST00000594067 TPSAB1Q15661 275 aa17.02■□□□□ 0.31
LIG1-206ENST00000594067 NBPF20Q3BBV1 942 aa17.02■□□□□ 0.31
LIG1-206ENST00000594067 CASC4Q6P4E1 433 aa17.02■□□□□ 0.31
LIG1-206ENST00000594067 IZUMO2Q6UXV1 221 aa17.02■□□□□ 0.31
LIG1-206ENST00000594067 SESTD1Q86VW0 696 aa17.02■□□□□ 0.31
LIG1-206ENST00000594067 EGFL6Q8IUX8 553 aa17.02■□□□□ 0.31
LIG1-206ENST00000594067 C7orf31Q8N865 590 aa17.02■□□□□ 0.31
LIG1-206ENST00000594067 PPP1R14CQ8TAE6 165 aa17.02■□□□□ 0.31
LIG1-206ENST00000594067 SLC35F5Q8WV83 523 aa17.02■□□□□ 0.31
LIG1-206ENST00000594067 NLRP7Q8WX94 980 aa17.02■□□□□ 0.31
LIG1-206ENST00000594067 APBB2Q92870 758 aa17.02■□□□□ 0.31
LIG1-206ENST00000594067 THTPAQ9BU02 230 aa17.02■□□□□ 0.31
LIG1-206ENST00000594067 RNF19AQ9NV58 838 aa17.02■□□□□ 0.31
LIG1-206ENST00000594067 HESX1Q9UBX0 185 aa17.02■□□□□ 0.31
LIG1-206ENST00000594067 TAGLN3Q9UI15 199 aa17.02■□□□□ 0.31
LIG1-206ENST00000594067 PRR5-ARHGAP8B1AHC4 643 aa17.01■□□□□ 0.31
LIG1-206ENST00000594067 LYPLA1O75608 230 aaPredicted RBP17.01■□□□□ 0.31
LIG1-206ENST00000594067 ARHGAP8P85298 464 aa17.01■□□□□ 0.31
LIG1-206ENST00000594067 STILQ15468 1287 aa17.01■□□□□ 0.31
LIG1-206ENST00000594067 ZNF484Q5JVG2 852 aa17.01■□□□□ 0.31
LIG1-206ENST00000594067 GBP5Q96PP8 586 aa17.01■□□□□ 0.31
LIG1-206ENST00000594067 KCTD15Q96SI1 283 aaPredicted RBP17.01■□□□□ 0.31
LIG1-206ENST00000594067 ECSITQ9BQ95 431 aa17.01■□□□□ 0.31
LIG1-206ENST00000594067 CCDC106Q9BWC9 280 aa17.01■□□□□ 0.31
LIG1-206ENST00000594067 TSPAN1O60635 241 aa17.01■□□□□ 0.31
LIG1-206ENST00000594067 SLC25A27O95847 323 aa17.01■□□□□ 0.31
LIG1-206ENST00000594067 DESP17661 470 aa17.01■□□□□ 0.31
LIG1-206ENST00000594067 CRABP2P29373 138 aa17.01■□□□□ 0.31
LIG1-206ENST00000594067 SERPINB9P50453 376 aa17.01■□□□□ 0.31
LIG1-206ENST00000594067 RPS6KA3P51812 740 aa17.01■□□□□ 0.31
LIG1-206ENST00000594067 DSG1Q02413 1049 aa17.01■□□□□ 0.31
LIG1-206ENST00000594067 TTLL4Q14679 1199 aa17.01■□□□□ 0.31
LIG1-206ENST00000594067 FASTKD1Q53R41 847 aaKnown RBP17.01■□□□□ 0.31
LIG1-206ENST00000594067 RNF217Q8TC41 542 aa17.01■□□□□ 0.31
LIG1-206ENST00000594067 TTC1Q99614 292 aa17.01■□□□□ 0.31
LIG1-206ENST00000594067 APOL6Q9BWW8 343 aa17.01■□□□□ 0.31
LIG1-206ENST00000594067 DPEP3Q9H4B8 488 aa17.01■□□□□ 0.31
LIG1-206ENST00000594067 MTMR10Q9NXD2 777 aa17.01■□□□□ 0.31
LIG1-206ENST00000594067 RBPJLQ9UBG7 517 aa17.01■□□□□ 0.31
LIG1-206ENST00000594067 DNAJB4Q9UDY4 337 aa17.01■□□□□ 0.31
LIG1-206ENST00000594067 AP4E1Q9UPM8 1137 aa17.01■□□□□ 0.31
LIG1-206ENST00000594067 ITM2AO43736 263 aa17■□□□□ 0.31
LIG1-206ENST00000594067 LGALS2P05162 132 aa17■□□□□ 0.31
LIG1-206ENST00000594067 RPL10AP62906 217 aaKnown RBP17■□□□□ 0.31
LIG1-206ENST00000594067 DPYSL2Q16555 572 aa17■□□□□ 0.31
LIG1-206ENST00000594067 HEATR6Q6AI08 1181 aaKnown RBP17■□□□□ 0.31
LIG1-206ENST00000594067 PYROXD2Q8N2H3 581 aa17■□□□□ 0.31
LIG1-206ENST00000594067 CCDC185Q8N715 623 aa17■□□□□ 0.31
LIG1-206ENST00000594067 AZIN2Q96A70 460 aa17■□□□□ 0.31
LIG1-206ENST00000594067 QKIQ96PU8 341 aaKnown RBP eCLIP17■□□□□ 0.31
LIG1-206ENST00000594067 CSPG4P5Q96PW8 444 aa17■□□□□ 0.31
LIG1-206ENST00000594067 TUBGCP5Q96RT8 1024 aa17■□□□□ 0.31
LIG1-206ENST00000594067 XAB2Q9HCS7 855 aaKnown RBP17■□□□□ 0.31
LIG1-206ENST00000594067 MOCS1Q9NZB8 636 aa17■□□□□ 0.31
LIG1-206ENST00000594067 DNAJC25-GNG10A0A024R161 153 aa17■□□□□ 0.31
LIG1-206ENST00000594067 MEI4A8MW99 385 aa17■□□□□ 0.31
LIG1-206ENST00000594067 BIRC5O15392 142 aa17■□□□□ 0.31
LIG1-206ENST00000594067 STAU1O95793 577 aaKnown RBP17■□□□□ 0.31
LIG1-206ENST00000594067 LCP1P13796 627 aa17■□□□□ 0.31
LIG1-206ENST00000594067 VAV1P15498 845 aa17■□□□□ 0.31
LIG1-206ENST00000594067 AP2B1P63010 937 aa17■□□□□ 0.31
LIG1-206ENST00000594067 POU5F1BQ06416 359 aa17■□□□□ 0.31
LIG1-206ENST00000594067 C4orf22Q6V702 233 aa17■□□□□ 0.31
LIG1-206ENST00000594067 TTC39CQ8N584 583 aa17■□□□□ 0.31
LIG1-206ENST00000594067 OR6B3Q8NGW1 331 aa17■□□□□ 0.31
LIG1-206ENST00000594067 CLMNQ96JQ2 1002 aa17■□□□□ 0.31
LIG1-206ENST00000594067 DTLQ9NZJ0 730 aa17■□□□□ 0.31
LIG1-206ENST00000594067 PPM1HQ9ULR3 514 aa17■□□□□ 0.31
LIG1-206ENST00000594067 CIB2O75838 187 aa16.99■□□□□ 0.31
LIG1-206ENST00000594067 ZNF286BP0CG31 522 aa16.99■□□□□ 0.31
LIG1-206ENST00000594067 ADORA2BP29275 332 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms