RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 SERPINB11Q96P15 392 aa19.24■□□□□ 0.67
SHKBP1-202ENST00000593764 TRIM62Q9BVG3 475 aa19.24■□□□□ 0.67
SHKBP1-202ENST00000593764 FAM207AQ9NSI2 230 aaPredicted RBP19.24■□□□□ 0.67
SHKBP1-202ENST00000593764 SPAG17Q6Q759 2223 aa19.24■□□□□ 0.67
SHKBP1-202ENST00000593764 GOLGA6L7A0A1B0GV03 622 aa19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 CAPN9O14815 690 aa19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 ACSL4O60488 711 aa19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 GLI1P08151 1106 aa19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 ATP1A3P13637 1013 aa19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 NTSR1P30989 418 aa19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 SLC6A4P31645 630 aa19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 SGSHP51688 502 aa19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 JAM2P57087 298 aa19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 ZNF445P59923 1031 aa19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 POLR2FP61218 127 aaKnown RBP19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 PIK3R6Q5UE93 754 aa19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 RNF43Q68DV7 783 aa19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 NADSYN1Q6IA69 706 aa19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 ANO7Q6IWH7 933 aa19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 RFWD3Q6PCD5 774 aa19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 OLFML1Q6UWY5 402 aa19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 FAM183BPQ6ZVS7 135 aa19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 TRMT11Q7Z4G4 463 aaKnown RBP19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 NOP9Q86U38 636 aaKnown RBP19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 KBTBD6Q86V97 674 aa19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 KIAA2013Q8IYS2 634 aa19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 FAM160A2Q8N612 972 aaPredicted RBP19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 TMA16Q96EY4 203 aaKnown RBP19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 NOX5Q96PH1 765 aa19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 SLC2A13Q96QE2 648 aa19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 SLC2A11Q9BYW1 496 aa19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 CD248Q9HCU0 757 aa19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 ASNSD1Q9NWL6 643 aa19.23■□□□□ 0.67
SHKBP1-202ENST00000593764 A0A1W2PQF6 199 aa19.22■□□□□ 0.67
SHKBP1-202ENST00000593764 DCLK1O15075 740 aa19.22■□□□□ 0.67
SHKBP1-202ENST00000593764 IRAK2O43187 625 aa19.22■□□□□ 0.67
SHKBP1-202ENST00000593764 TRUB2O95900 331 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-202ENST00000593764 RETP07949 1114 aa19.22■□□□□ 0.67
SHKBP1-202ENST00000593764 CDK11BP21127 795 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-202ENST00000593764 WASP42768 502 aa19.22■□□□□ 0.67
SHKBP1-202ENST00000593764 SLC11A2P49281 568 aa19.22■□□□□ 0.67
SHKBP1-202ENST00000593764 SYCP1Q15431 976 aa19.22■□□□□ 0.67
SHKBP1-202ENST00000593764 DCAF6Q58WW2 860 aa19.22■□□□□ 0.67
SHKBP1-202ENST00000593764 EFHC1Q5JVL4 640 aa19.22■□□□□ 0.67
SHKBP1-202ENST00000593764 TAF3Q5VWG9 929 aa19.22■□□□□ 0.67
SHKBP1-202ENST00000593764 TMEM215Q68D42 235 aa19.22■□□□□ 0.67
SHKBP1-202ENST00000593764 CACNA2D4Q7Z3S7 1137 aa19.22■□□□□ 0.67
SHKBP1-202ENST00000593764 DHX40Q8IX18 779 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-202ENST00000593764 EPS8L1Q8TE68 723 aa19.22■□□□□ 0.67
SHKBP1-202ENST00000593764 MYEOVQ96EZ4 313 aa19.22■□□□□ 0.67
SHKBP1-202ENST00000593764 ZC3H10Q96K80 434 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-202ENST00000593764 BPIFA3Q9BQP9 254 aa19.22■□□□□ 0.67
SHKBP1-202ENST00000593764 FUCA2Q9BTY2 467 aa19.22■□□□□ 0.67
SHKBP1-202ENST00000593764 TPSD1Q9BZJ3 242 aa19.22■□□□□ 0.67
SHKBP1-202ENST00000593764 GMEB2Q9UKD1 530 aa19.22■□□□□ 0.67
SHKBP1-202ENST00000593764 CEP83Q9Y592 693 aa19.22■□□□□ 0.67
SHKBP1-202ENST00000593764 ABCA7Q8IZY2 2146 aa19.22■□□□□ 0.67
SHKBP1-202ENST00000593764 WASH3PC4AMC7 463 aa19.21■□□□□ 0.67
SHKBP1-202ENST00000593764 GRAP2O75791 330 aa19.21■□□□□ 0.67
SHKBP1-202ENST00000593764 GABRB2P47870 512 aa19.21■□□□□ 0.67
SHKBP1-202ENST00000593764 UBXN1Q04323 297 aa19.21■□□□□ 0.67
SHKBP1-202ENST00000593764 ZC3H12AQ5D1E8 599 aaKnown RBP19.21■□□□□ 0.67
SHKBP1-202ENST00000593764 OR6B2Q6IFH4 312 aa19.21■□□□□ 0.67
SHKBP1-202ENST00000593764 CHPFQ8IZ52 775 aa19.21■□□□□ 0.67
SHKBP1-202ENST00000593764 DEFB106AQ8N104 65 aa19.21■□□□□ 0.67
SHKBP1-202ENST00000593764 TMEM35BQ8NCS4 154 aa19.21■□□□□ 0.67
SHKBP1-202ENST00000593764 ANKRD20A12PQ8NF67 263 aa19.21■□□□□ 0.67
SHKBP1-202ENST00000593764 OLIG1Q8TAK6 271 aa19.21■□□□□ 0.67
SHKBP1-202ENST00000593764 ERGIC2Q96RQ1 377 aa19.21■□□□□ 0.67
SHKBP1-202ENST00000593764 GABRG3Q99928 467 aa19.21■□□□□ 0.67
SHKBP1-202ENST00000593764 NAT10Q9H0A0 1025 aaKnown RBP19.21■□□□□ 0.67
SHKBP1-202ENST00000593764 POLMQ9NP87 494 aaPredicted RBP19.21■□□□□ 0.67
SHKBP1-202ENST00000593764 PARD6AQ9NPB6 346 aa19.21■□□□□ 0.67
SHKBP1-202ENST00000593764 NLRC4Q9NPP4 1024 aa19.21■□□□□ 0.67
SHKBP1-202ENST00000593764 XPO7Q9UIA9 1087 aaKnown RBP19.21■□□□□ 0.67
SHKBP1-202ENST00000593764 NOCTQ9UK39 431 aaKnown RBP19.21■□□□□ 0.67
SHKBP1-202ENST00000593764 INVSQ9Y283 1065 aa19.21■□□□□ 0.67
SHKBP1-202ENST00000593764 CEP250Q9BV73 2442 aa19.2■□□□□ 0.66
SHKBP1-202ENST00000593764 HSF2BPO75031 334 aa19.2■□□□□ 0.66
SHKBP1-202ENST00000593764 ALDH1A2O94788 518 aa19.2■□□□□ 0.66
SHKBP1-202ENST00000593764 GFPT2O94808 682 aa19.2■□□□□ 0.66
SHKBP1-202ENST00000593764 MMEP08473 750 aa19.2■□□□□ 0.66
SHKBP1-202ENST00000593764 HOXB2P14652 356 aa19.2■□□□□ 0.66
SHKBP1-202ENST00000593764 HLA-FP30511 346 aa19.2■□□□□ 0.66
SHKBP1-202ENST00000593764 SOX5P35711 763 aa19.2■□□□□ 0.66
SHKBP1-202ENST00000593764 SLC6A3Q01959 620 aa19.2■□□□□ 0.66
SHKBP1-202ENST00000593764 KLHL40Q2TBA0 621 aa19.2■□□□□ 0.66
SHKBP1-202ENST00000593764 PLK5Q496M5 336 aa19.2■□□□□ 0.66
SHKBP1-202ENST00000593764 MPP7Q5T2T1 576 aa19.2■□□□□ 0.66
SHKBP1-202ENST00000593764 KIAA1211LQ6NV74 962 aa19.2■□□□□ 0.66
SHKBP1-202ENST00000593764 SLC26A9Q7LBE3 791 aa19.2■□□□□ 0.66
SHKBP1-202ENST00000593764 ANKS1BQ7Z6G8 1248 aa19.2■□□□□ 0.66
SHKBP1-202ENST00000593764 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-202ENST00000593764 KIAA0907Q7Z7F0 614 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-202ENST00000593764 ZNF397Q8NF99 534 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-202ENST00000593764 PRICKLE1Q96MT3 831 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-202ENST00000593764 IRX2Q9BZI1 471 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-202ENST00000593764 NUCKS1Q9H1E3 243 aaKnown RBP19.2■□□□□ 0.66
SHKBP1-202ENST00000593764 DUSP15Q9H1R2 295 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-202ENST00000593764 ELOVL2Q9NXB9 296 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms