RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 GJB3O75712 270 aa25■■□□□ 1.59
LSM4-202ENST00000593564 OXTRP30559 389 aa25■■□□□ 1.59
LSM4-202ENST00000593564 HARS2P49590 506 aaKnown RBP25■■□□□ 1.59
LSM4-202ENST00000593564 TPMTP51580 245 aa25■■□□□ 1.59
LSM4-202ENST00000593564 MPPE1Q53F39 396 aa25■■□□□ 1.59
LSM4-202ENST00000593564 TMEM215Q68D42 235 aa25■■□□□ 1.59
LSM4-202ENST00000593564 FMNL3Q8IVF7 1028 aa25■■□□□ 1.59
LSM4-202ENST00000593564 FMR1NBQ8N0W7 255 aaPredicted RBP25■■□□□ 1.59
LSM4-202ENST00000593564 NDRG1Q92597 394 aaKnown RBP25■■□□□ 1.59
LSM4-202ENST00000593564 SIPA1Q96FS4 1042 aa25■■□□□ 1.59
LSM4-202ENST00000593564 GSDMAQ96QA5 445 aa25■■□□□ 1.59
LSM4-202ENST00000593564 CIPCQ9C0C6 399 aa25■■□□□ 1.59
LSM4-202ENST00000593564 KCNJ18B7U540 433 aa24.99■■□□□ 1.59
LSM4-202ENST00000593564 H0Y626 953 aa24.99■■□□□ 1.59
LSM4-202ENST00000593564 TRIM16O95361 564 aa24.99■■□□□ 1.59
LSM4-202ENST00000593564 IGLV3-19P01714 112 aa24.99■■□□□ 1.59
LSM4-202ENST00000593564 VDRP11473 427 aa24.99■■□□□ 1.59
LSM4-202ENST00000593564 NCAM1P13591 858 aa24.99■■□□□ 1.59
LSM4-202ENST00000593564 PRKCHP24723 683 aa24.99■■□□□ 1.59
LSM4-202ENST00000593564 MAOBP27338 520 aa24.99■■□□□ 1.59
LSM4-202ENST00000593564 HOXD9P28356 352 aaPredicted RBP24.99■■□□□ 1.59
LSM4-202ENST00000593564 COPAP53621 1224 aa24.99■■□□□ 1.59
LSM4-202ENST00000593564 ZNF445P59923 1031 aa24.99■■□□□ 1.59
LSM4-202ENST00000593564 ADIGQ0VDE8 80 aa24.99■■□□□ 1.59
LSM4-202ENST00000593564 ANKRD40Q6AI12 368 aa24.99■■□□□ 1.59
LSM4-202ENST00000593564 UBR7Q8N806 425 aa24.99■■□□□ 1.59
LSM4-202ENST00000593564 RNF139Q8WU17 664 aa24.99■■□□□ 1.59
LSM4-202ENST00000593564 SORCS1Q8WY21 1168 aa24.99■■□□□ 1.59
LSM4-202ENST00000593564 KCTD13Q8WZ19 329 aa24.99■■□□□ 1.59
LSM4-202ENST00000593564 PRCCQ92733 491 aaPredicted RBP24.99■■□□□ 1.59
LSM4-202ENST00000593564 IPO9Q96P70 1041 aaKnown RBP24.99■■□□□ 1.59
LSM4-202ENST00000593564 GPR174Q9BXC1 333 aa24.99■■□□□ 1.59
LSM4-202ENST00000593564 ZDHHC5Q9C0B5 715 aa24.99■■□□□ 1.59
LSM4-202ENST00000593564 STOML2Q9UJZ1 356 aa24.99■■□□□ 1.59
LSM4-202ENST00000593564 MEI4A8MW99 385 aa24.98■■□□□ 1.59
LSM4-202ENST00000593564 SETSIPP0DME0 302 aa24.98■■□□□ 1.59
LSM4-202ENST00000593564 CD19P15391 556 aa24.98■■□□□ 1.59
LSM4-202ENST00000593564 PMS1P54277 932 aaKnown RBP24.98■■□□□ 1.59
LSM4-202ENST00000593564 FAM193AP78312 1265 aa24.98■■□□□ 1.59
LSM4-202ENST00000593564 BSPRYQ5W0U4 402 aa24.98■■□□□ 1.59
LSM4-202ENST00000593564 SERPINA13PQ6UXR4 307 aa24.98■■□□□ 1.59
LSM4-202ENST00000593564 SIX6OS1Q8N1H7 587 aa24.98■■□□□ 1.59
LSM4-202ENST00000593564 SCML4Q8N228 414 aa24.98■■□□□ 1.59
LSM4-202ENST00000593564 SLC35C1Q96A29 364 aa24.98■■□□□ 1.59
LSM4-202ENST00000593564 ARMCX3Q9UH62 379 aaPredicted RBP24.98■■□□□ 1.59
LSM4-202ENST00000593564 KIAA1257Q9ULG3 409 aa24.98■■□□□ 1.59
LSM4-202ENST00000593564 MSRB2Q9Y3D2 182 aa24.98■■□□□ 1.59
LSM4-202ENST00000593564 FAM208BQ5VWN6 2430 aa24.98■■□□□ 1.59
LSM4-202ENST00000593564 CKAP5Q14008 2032 aa24.97■■□□□ 1.59
LSM4-202ENST00000593564 A0A1B0GTW7 788 aa24.97■■□□□ 1.59
LSM4-202ENST00000593564 YJEFN3A6XGL0 299 aa24.97■■□□□ 1.59
LSM4-202ENST00000593564 E7ENQ6 273 aa24.97■■□□□ 1.59
LSM4-202ENST00000593564 O00370 1275 aa24.97■■□□□ 1.59
LSM4-202ENST00000593564 LATS1O95835 1130 aa24.97■■□□□ 1.59
LSM4-202ENST00000593564 EPHX1P07099 455 aa24.97■■□□□ 1.59
LSM4-202ENST00000593564 TBXAS1P24557 533 aaPredicted RBP24.97■■□□□ 1.59
LSM4-202ENST00000593564 RDXP35241 583 aaKnown RBP24.97■■□□□ 1.59
LSM4-202ENST00000593564 ARID5AQ03989 594 aa24.97■■□□□ 1.59
LSM4-202ENST00000593564 LRRC63Q05C16 580 aa24.97■■□□□ 1.59
LSM4-202ENST00000593564 GRIK2Q13002 908 aa24.97■■□□□ 1.59
LSM4-202ENST00000593564 SPATA20Q8TB22 786 aa24.97■■□□□ 1.59
LSM4-202ENST00000593564 UBA3Q8TBC4 463 aa24.97■■□□□ 1.59
LSM4-202ENST00000593564 EDEM1Q92611 657 aa24.97■■□□□ 1.59
LSM4-202ENST00000593564 CNGB3Q9NQW8 809 aa24.97■■□□□ 1.59
LSM4-202ENST00000593564 ABCC13Q9NSE7 274 aa24.97■■□□□ 1.59
LSM4-202ENST00000593564 SFMBT1Q9UHJ3 866 aa24.97■■□□□ 1.59
LSM4-202ENST00000593564 ACADMP11310 421 aa24.96■■□□□ 1.59
LSM4-202ENST00000593564 HLA-FP30511 346 aa24.96■■□□□ 1.59
LSM4-202ENST00000593564 ZNF423Q2M1K9 1284 aa24.96■■□□□ 1.59
LSM4-202ENST00000593564 PKDCCQ504Y2 493 aa24.96■■□□□ 1.59
LSM4-202ENST00000593564 ADGRF1Q5T601 910 aa24.96■■□□□ 1.59
LSM4-202ENST00000593564 WFIKKN2Q8TEU8 576 aa24.96■■□□□ 1.59
LSM4-202ENST00000593564 NUP58Q9BVL2 599 aa24.96■■□□□ 1.59
LSM4-202ENST00000593564 GTPBP4Q9BZE4 634 aaKnown RBP24.96■■□□□ 1.59
LSM4-202ENST00000593564 KLK13Q9UKR3 277 aa24.96■■□□□ 1.59
LSM4-202ENST00000593564 METTL12A8MUP2 240 aa24.95■■□□□ 1.58
LSM4-202ENST00000593564 SH3BP5O60239 455 aa24.95■■□□□ 1.58
LSM4-202ENST00000593564 TSPAN3O60637 253 aa24.95■■□□□ 1.58
LSM4-202ENST00000593564 SMC2O95347 1197 aa24.95■■□□□ 1.58
LSM4-202ENST00000593564 DCAF12L1Q5VU92 463 aa24.95■■□□□ 1.58
LSM4-202ENST00000593564 LCLAT1Q6UWP7 414 aa24.95■■□□□ 1.58
LSM4-202ENST00000593564 ZCCHC9Q8N567 271 aaKnown RBP24.95■■□□□ 1.58
LSM4-202ENST00000593564 OR2T3Q8NH03 318 aa24.95■■□□□ 1.58
LSM4-202ENST00000593564 TMA16Q96EY4 203 aaKnown RBP24.95■■□□□ 1.58
LSM4-202ENST00000593564 WDFY3Q8IZQ1 3526 aa24.94■■□□□ 1.58
LSM4-202ENST00000593564 FAM221BA6H8Z2 402 aa24.94■■□□□ 1.58
LSM4-202ENST00000593564 TRIM49BA6NDI0 452 aa24.94■■□□□ 1.58
LSM4-202ENST00000593564 PAEPP09466 180 aa24.94■■□□□ 1.58
LSM4-202ENST00000593564 C7P10643 843 aa24.94■■□□□ 1.58
LSM4-202ENST00000593564 DAOAP59103 153 aa24.94■■□□□ 1.58
LSM4-202ENST00000593564 LRMPQ12912 555 aa24.94■■□□□ 1.58
LSM4-202ENST00000593564 CAMK2GQ13555 558 aaPredicted RBP24.94■■□□□ 1.58
LSM4-202ENST00000593564 MSANTD2Q6P1R3 559 aa24.94■■□□□ 1.58
LSM4-202ENST00000593564 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.94■■□□□ 1.58
LSM4-202ENST00000593564 ENGASEQ8NFI3 743 aa24.94■■□□□ 1.58
LSM4-202ENST00000593564 SMARCE1Q969G3 411 aa24.94■■□□□ 1.58
LSM4-202ENST00000593564 CAMK1GQ96NX5 476 aa24.94■■□□□ 1.58
LSM4-202ENST00000593564 MIR1-1HGQ9H1L0 117 aa24.94■■□□□ 1.58
LSM4-202ENST00000593564 PCED1AQ9H1Q7 454 aa24.94■■□□□ 1.58
LSM4-202ENST00000593564 TMEM245Q9H330 911 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms