RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 STX17P56962 302 aa18.72■□□□□ 0.59
CIRBP-243ENST00000593128 TRIP4Q15650 581 aaPredicted RBP18.72■□□□□ 0.59
CIRBP-243ENST00000593128 FNDC3BQ53EP0 1204 aaKnown RBP18.72■□□□□ 0.59
CIRBP-243ENST00000593128 RABEPKQ7Z6M1 372 aa18.72■□□□□ 0.59
CIRBP-243ENST00000593128 GOLGA1Q92805 767 aa18.72■□□□□ 0.59
CIRBP-243ENST00000593128 TOE1Q96GM8 510 aaKnown RBP18.72■□□□□ 0.59
CIRBP-243ENST00000593128 MIS12Q9H081 205 aa18.72■□□□□ 0.59
CIRBP-243ENST00000593128 MIR1-1HGQ9H1L0 117 aa18.72■□□□□ 0.59
CIRBP-243ENST00000593128 ABCC13Q9NSE7 274 aa18.72■□□□□ 0.59
CIRBP-243ENST00000593128 KIAA1257Q9ULG3 409 aa18.72■□□□□ 0.59
CIRBP-243ENST00000593128 HBS1LQ9Y450 684 aaKnown RBP18.72■□□□□ 0.59
CIRBP-243ENST00000593128 ACACBO00763 2458 aa18.71■□□□□ 0.59
CIRBP-243ENST00000593128 RNF225M0QZC1 329 aaPredicted RBP18.71■□□□□ 0.59
CIRBP-243ENST00000593128 OPHN1O60890 802 aa18.71■□□□□ 0.59
CIRBP-243ENST00000593128 TOP3BO95985 862 aaKnown RBP18.71■□□□□ 0.59
CIRBP-243ENST00000593128 HLA-EP13747 358 aa18.71■□□□□ 0.59
CIRBP-243ENST00000593128 DAOAP59103 153 aa18.71■□□□□ 0.59
CIRBP-243ENST00000593128 SHC2P98077 582 aa18.71■□□□□ 0.59
CIRBP-243ENST00000593128 PEAR1Q5VY43 1037 aaPredicted RBP18.71■□□□□ 0.59
CIRBP-243ENST00000593128 PMF1Q6P1K2 205 aa18.71■□□□□ 0.59
CIRBP-243ENST00000593128 LCLAT1Q6UWP7 414 aa18.71■□□□□ 0.59
CIRBP-243ENST00000593128 FAM124AQ86V42 546 aa18.71■□□□□ 0.59
CIRBP-243ENST00000593128 TMPRSS6Q8IU80 811 aa18.71■□□□□ 0.59
CIRBP-243ENST00000593128 MINDY1Q8N5J2 469 aa18.71■□□□□ 0.59
CIRBP-243ENST00000593128 UBR7Q8N806 425 aa18.71■□□□□ 0.59
CIRBP-243ENST00000593128 RBBP8NLQ8NC74 664 aaPredicted RBP18.71■□□□□ 0.59
CIRBP-243ENST00000593128 CLEC4CQ8WTT0 213 aa18.71■□□□□ 0.59
CIRBP-243ENST00000593128 CYB5D2Q8WUJ1 264 aa18.71■□□□□ 0.59
CIRBP-243ENST00000593128 PRCCQ92733 491 aaPredicted RBP18.71■□□□□ 0.59
CIRBP-243ENST00000593128 SIPA1Q96FS4 1042 aa18.71■□□□□ 0.59
CIRBP-243ENST00000593128 GPR174Q9BXC1 333 aa18.71■□□□□ 0.59
CIRBP-243ENST00000593128 MKRN2Q9H000 416 aaKnown RBP18.71■□□□□ 0.59
CIRBP-243ENST00000593128 CNGB3Q9NQW8 809 aa18.71■□□□□ 0.59
CIRBP-243ENST00000593128 TPRP12270 2363 aaKnown RBP18.71■□□□□ 0.59
CIRBP-243ENST00000593128 SPAARA0A1B0GVQ0 90 aa18.7■□□□□ 0.58
CIRBP-243ENST00000593128 NPC1O15118 1278 aa18.7■□□□□ 0.58
CIRBP-243ENST00000593128 SYPP08247 313 aa18.7■□□□□ 0.58
CIRBP-243ENST00000593128 PAEPP09466 180 aa18.7■□□□□ 0.58
CIRBP-243ENST00000593128 NCAM1P13591 858 aa18.7■□□□□ 0.58
CIRBP-243ENST00000593128 KRT5P13647 590 aa18.7■□□□□ 0.58
CIRBP-243ENST00000593128 GNSP15586 552 aa18.7■□□□□ 0.58
CIRBP-243ENST00000593128 HOXD9P28356 352 aaPredicted RBP18.7■□□□□ 0.58
CIRBP-243ENST00000593128 PPP1R2P41236 205 aa18.7■□□□□ 0.58
CIRBP-243ENST00000593128 WDR45BQ5MNZ6 344 aa18.7■□□□□ 0.58
CIRBP-243ENST00000593128 TMEM215Q68D42 235 aa18.7■□□□□ 0.58
CIRBP-243ENST00000593128 RFWD3Q6PCD5 774 aa18.7■□□□□ 0.58
CIRBP-243ENST00000593128 CREBRFQ8IUR6 639 aa18.7■□□□□ 0.58
CIRBP-243ENST00000593128 ARHGEF19Q8IW93 802 aa18.7■□□□□ 0.58
CIRBP-243ENST00000593128 ZNF366Q8N895 744 aa18.7■□□□□ 0.58
CIRBP-243ENST00000593128 KCTD13Q8WZ19 329 aa18.7■□□□□ 0.58
CIRBP-243ENST00000593128 FOXJ1Q92949 421 aa18.7■□□□□ 0.58
CIRBP-243ENST00000593128 TMA16Q96EY4 203 aaKnown RBP18.7■□□□□ 0.58
CIRBP-243ENST00000593128 SLC2A11Q9BYW1 496 aa18.7■□□□□ 0.58
CIRBP-243ENST00000593128 ABCB8Q9NUT2 735 aa18.7■□□□□ 0.58
CIRBP-243ENST00000593128 STIM2Q9P246 746 aa18.7■□□□□ 0.58
CIRBP-243ENST00000593128 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.7■□□□□ 0.58
CIRBP-243ENST00000593128 GOLGA6L7A0A1B0GV03 622 aa18.69■□□□□ 0.58
CIRBP-243ENST00000593128 BICDL2A1A5D9 508 aa18.69■□□□□ 0.58
CIRBP-243ENST00000593128 ARHGAP33O14559 1287 aa18.69■□□□□ 0.58
CIRBP-243ENST00000593128 SGSHP51688 502 aa18.69■□□□□ 0.58
CIRBP-243ENST00000593128 EIF4HQ15056 248 aaKnown RBP18.69■□□□□ 0.58
CIRBP-243ENST00000593128 E2F5Q15329 346 aa18.69■□□□□ 0.58
CIRBP-243ENST00000593128 TTI2Q6NXR4 508 aa18.69■□□□□ 0.58
CIRBP-243ENST00000593128 CHST9Q7L1S5 443 aa18.69■□□□□ 0.58
CIRBP-243ENST00000593128 FAM217AQ8IXS0 508 aa18.69■□□□□ 0.58
CIRBP-243ENST00000593128 SNX19Q92543 992 aa18.69■□□□□ 0.58
CIRBP-243ENST00000593128 ZNF419Q96HQ0 510 aaPredicted RBP18.69■□□□□ 0.58
CIRBP-243ENST00000593128 ZSWIM1Q9BR11 485 aa18.69■□□□□ 0.58
CIRBP-243ENST00000593128 CAPN10Q9HC96 672 aa18.69■□□□□ 0.58
CIRBP-243ENST00000593128 ST7Q9NRC1 585 aa18.69■□□□□ 0.58
CIRBP-243ENST00000593128 SUSD2Q9UGT4 822 aa18.69■□□□□ 0.58
CIRBP-243ENST00000593128 PLA2G4CQ9UP65 541 aa18.69■□□□□ 0.58
CIRBP-243ENST00000593128 ASCC3Q8N3C0 2202 aaKnown RBP18.69■□□□□ 0.58
CIRBP-243ENST00000593128 MAP1BP46821 2468 aaKnown RBP18.68■□□□□ 0.58
CIRBP-243ENST00000593128 PCDH15Q96QU1 1955 aa18.68■□□□□ 0.58
CIRBP-243ENST00000593128 CHD8Q9HCK8 2581 aa18.68■□□□□ 0.58
CIRBP-243ENST00000593128 KCNJ18B7U540 433 aa18.68■□□□□ 0.58
CIRBP-243ENST00000593128 PPP1R3GB7ZBB8 358 aa18.68■□□□□ 0.58
CIRBP-243ENST00000593128 TIMM44O43615 452 aa18.68■□□□□ 0.58
CIRBP-243ENST00000593128 TBL1XO60907 577 aa18.68■□□□□ 0.58
CIRBP-243ENST00000593128 LTFP02788 710 aa18.68■□□□□ 0.58
CIRBP-243ENST00000593128 HLA-FP30511 346 aa18.68■□□□□ 0.58
CIRBP-243ENST00000593128 SLC11A2P49281 568 aa18.68■□□□□ 0.58
CIRBP-243ENST00000593128 TPMTP51580 245 aa18.68■□□□□ 0.58
CIRBP-243ENST00000593128 ZNF132P52740 706 aa18.68■□□□□ 0.58
CIRBP-243ENST00000593128 SIM1P81133 766 aaPredicted RBP18.68■□□□□ 0.58
CIRBP-243ENST00000593128 CNGA2Q16280 664 aa18.68■□□□□ 0.58
CIRBP-243ENST00000593128 PKDCCQ504Y2 493 aa18.68■□□□□ 0.58
CIRBP-243ENST00000593128 ADGRF1Q5T601 910 aa18.68■□□□□ 0.58
CIRBP-243ENST00000593128 ZCCHC9Q8N567 271 aaKnown RBP18.68■□□□□ 0.58
CIRBP-243ENST00000593128 SLC35F5Q8WV83 523 aa18.68■□□□□ 0.58
CIRBP-243ENST00000593128 ITM2CQ9NQX7 267 aa18.68■□□□□ 0.58
CIRBP-243ENST00000593128 WSB2Q9NYS7 404 aaPredicted RBP18.68■□□□□ 0.58
CIRBP-243ENST00000593128 USP36Q9P275 1121 aaKnown RBP18.68■□□□□ 0.58
CIRBP-243ENST00000593128 GGA2Q9UJY4 613 aa18.68■□□□□ 0.58
CIRBP-243ENST00000593128 CACNA1BQ00975 2339 aa18.68■□□□□ 0.58
CIRBP-243ENST00000593128 C1QTNF9BB2RNN3 333 aa18.67■□□□□ 0.58
CIRBP-243ENST00000593128 GADD45BO75293 160 aaPredicted RBP18.67■□□□□ 0.58
CIRBP-243ENST00000593128 GABBR2O75899 941 aa18.67■□□□□ 0.58
CIRBP-243ENST00000593128 C1QTNF9P0C862 333 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms