RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 M0QYT0 321 aa17.1■□□□□ 0.33
PRKCSH-217ENST00000592741 OPHN1O60890 802 aa17.1■□□□□ 0.33
PRKCSH-217ENST00000592741 BEST1O76090 585 aa17.1■□□□□ 0.33
PRKCSH-217ENST00000592741 DEUP1Q05D60 604 aa17.1■□□□□ 0.33
PRKCSH-217ENST00000592741 PDK1Q15118 436 aa17.1■□□□□ 0.33
PRKCSH-217ENST00000592741 PRKD1Q15139 912 aaPredicted RBP17.1■□□□□ 0.33
PRKCSH-217ENST00000592741 FSCN1Q16658 493 aaKnown RBP17.1■□□□□ 0.33
PRKCSH-217ENST00000592741 NBPF20Q3BBV1 942 aa17.1■□□□□ 0.33
PRKCSH-217ENST00000592741 PREPLQ4J6C6 727 aaPredicted RBP17.1■□□□□ 0.33
PRKCSH-217ENST00000592741 PAQR9Q6ZVX9 377 aa17.1■□□□□ 0.33
PRKCSH-217ENST00000592741 BNIPLQ7Z465 357 aa17.1■□□□□ 0.33
PRKCSH-217ENST00000592741 TRIM42Q8IWZ5 723 aa17.1■□□□□ 0.33
PRKCSH-217ENST00000592741 COLGALT1Q8NBJ5 622 aa17.1■□□□□ 0.33
PRKCSH-217ENST00000592741 RFWD2Q8NHY2 731 aa17.1■□□□□ 0.33
PRKCSH-217ENST00000592741 INPP5DQ92835 1189 aa17.1■□□□□ 0.33
PRKCSH-217ENST00000592741 WNT8BQ93098 351 aa17.1■□□□□ 0.33
PRKCSH-217ENST00000592741 STAMBPL1Q96FJ0 436 aa17.1■□□□□ 0.33
PRKCSH-217ENST00000592741 LGMNQ99538 433 aa17.1■□□□□ 0.33
PRKCSH-217ENST00000592741 EIF2B3Q9NR50 452 aaKnown RBP17.1■□□□□ 0.33
PRKCSH-217ENST00000592741 SLC38A7Q9NVC3 462 aa17.1■□□□□ 0.33
PRKCSH-217ENST00000592741 M0QZ92 97 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 RNF103O00237 685 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 GABRDO14764 452 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 PPP1R12AO14974 1030 aaPredicted RBP17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 UGT1A9O60656 530 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 RFPL1O75677 317 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 FBXO21O94952 628 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 TGDSO95455 350 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 IL1BP01584 269 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 EZRP15311 586 aaKnown RBP17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 CYP2B6P20813 491 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 HOXC8P31273 242 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 GLUD2P49448 558 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 RASSF2P50749 326 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 PITX1P78337 314 aaPredicted RBP17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 AP1B1Q10567 949 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 BMPR2Q13873 1038 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 PARP6Q2NL67 630 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 TAF1BQ53T94 588 aaPredicted RBP17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 TAF2Q6P1X5 1199 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 TRMT10BQ6PF06 316 aaKnown RBP17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 ZFP42Q96MM3 310 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 UGT1A7Q9HAW7 530 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 UGT1A10Q9HAW8 530 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 UGT1A8Q9HAW9 530 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 KRT82Q9NSB4 513 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 HAO1Q9UJM8 370 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 PLLPQ9Y342 182 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 EEF2KO00418 725 aaKnown RBP17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 KLF11O14901 512 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 CREB3O43889 395 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 RGS2P41220 211 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 GRIA1P42261 906 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 NDUFV1P49821 464 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 TKTL1P51854 596 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 MAP3K7CLP57077 242 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 PURAQ00577 322 aaKnown RBP17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 NME3Q13232 169 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 GPR162Q16538 588 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 WLSQ5T9L3 541 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 STEAP4Q687X5 459 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 TSPYL2Q9H2G4 693 aaPredicted RBP17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 DDX43Q9NXZ2 648 aaKnown RBP17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 NR2E3Q9Y5X4 410 aa17.09■□□□□ 0.33
PRKCSH-217ENST00000592741 A0A0G2JND7 137 aa17.08■□□□□ 0.33
PRKCSH-217ENST00000592741 ZNF189O75820 626 aaPredicted RBP17.08■□□□□ 0.33
PRKCSH-217ENST00000592741 RARBP10826 455 aa17.08■□□□□ 0.33
PRKCSH-217ENST00000592741 CNTFP26441 200 aa17.08■□□□□ 0.33
PRKCSH-217ENST00000592741 ARFIP2P53365 341 aa17.08■□□□□ 0.33
PRKCSH-217ENST00000592741 MRPS6P82932 125 aaKnown RBP17.08■□□□□ 0.33
PRKCSH-217ENST00000592741 PAFAH1B3Q15102 231 aaKnown RBP17.08■□□□□ 0.33
PRKCSH-217ENST00000592741 PLEKHG4Q58EX7 1191 aa17.08■□□□□ 0.33
PRKCSH-217ENST00000592741 LRRC8BQ6P9F7 803 aa17.08■□□□□ 0.33
PRKCSH-217ENST00000592741 ZNF449Q6P9G9 518 aa17.08■□□□□ 0.33
PRKCSH-217ENST00000592741 CDHR3Q6ZTQ4 885 aa17.08■□□□□ 0.33
PRKCSH-217ENST00000592741 CYS1Q717R9 158 aa17.08■□□□□ 0.33
PRKCSH-217ENST00000592741 MTDHQ86UE4 582 aaKnown RBP17.08■□□□□ 0.33
PRKCSH-217ENST00000592741 TBC1D31Q96DN5 1066 aa17.08■□□□□ 0.33
PRKCSH-217ENST00000592741 P2RY11Q96G91 374 aa17.08■□□□□ 0.33
PRKCSH-217ENST00000592741 SENP8Q96LD8 212 aa17.08■□□□□ 0.33
PRKCSH-217ENST00000592741 TMEM237Q96Q45 408 aa17.08■□□□□ 0.33
PRKCSH-217ENST00000592741 TRIM56Q9BRZ2 755 aaKnown RBP17.08■□□□□ 0.33
PRKCSH-217ENST00000592741 SAR1AQ9NR31 198 aa17.08■□□□□ 0.33
PRKCSH-217ENST00000592741 TMPRSS4Q9NRS4 437 aa17.08■□□□□ 0.33
PRKCSH-217ENST00000592741 SEPT10Q9P0V9 454 aa17.08■□□□□ 0.33
PRKCSH-217ENST00000592741 KANSL3Q9P2N6 904 aa17.08■□□□□ 0.33
PRKCSH-217ENST00000592741 MTO1Q9Y2Z2 717 aaKnown RBP17.08■□□□□ 0.33
PRKCSH-217ENST00000592741 WDR27A2RRH5 827 aa17.08■□□□□ 0.32
PRKCSH-217ENST00000592741 SDR42E2A6NKP2 422 aa17.08■□□□□ 0.32
PRKCSH-217ENST00000592741 F5H423 210 aaPredicted RBP17.08■□□□□ 0.32
PRKCSH-217ENST00000592741 I3L4J1 428 aa17.08■□□□□ 0.32
PRKCSH-217ENST00000592741 CAPN9O14815 690 aa17.08■□□□□ 0.32
PRKCSH-217ENST00000592741 HNRNPCL1O60812 293 aaKnown RBP17.08■□□□□ 0.32
PRKCSH-217ENST00000592741 LHX1P48742 406 aa17.08■□□□□ 0.32
PRKCSH-217ENST00000592741 AIF1P55008 147 aa17.08■□□□□ 0.32
PRKCSH-217ENST00000592741 TAF1CQ15572 869 aaPredicted RBP17.08■□□□□ 0.32
PRKCSH-217ENST00000592741 KIAA0319Q5VV43 1072 aa17.08■□□□□ 0.32
PRKCSH-217ENST00000592741 SYPL2Q5VXT5 272 aa17.08■□□□□ 0.32
PRKCSH-217ENST00000592741 CASC4Q6P4E1 433 aa17.08■□□□□ 0.32
PRKCSH-217ENST00000592741 RFX8Q6ZV50 586 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms