RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 SOAT2O75908 522 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 SLC35G4P0C7Q5 338 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 COPS2P61201 443 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 MAP3K10Q02779 954 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 GKAP1Q5VSY0 366 aaPredicted RBP11.74□□□□□ -0.53
SEH1L-208ENST00000590843 TTI2Q6NXR4 508 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 VITQ6UXI7 678 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 SYT10Q6XYQ8 523 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 TPRG1Q6ZUI0 275 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 SYDE1Q6ZW31 735 aaPredicted RBP11.74□□□□□ -0.53
SEH1L-208ENST00000590843 SH3BP5LQ7L8J4 393 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 STRADAQ7RTN6 431 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 CCNJLQ8IV13 435 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 STK40Q8N2I9 435 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 SLC38A3Q99624 504 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 CA14Q9ULX7 337 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 SETD1AO15047 1707 aaKnown RBP11.74□□□□□ -0.53
SEH1L-208ENST00000590843 UBXN8O00124 270 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 KHNYNO15037 678 aaKnown RBP11.74□□□□□ -0.53
SEH1L-208ENST00000590843 HOXB2P14652 356 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 IDSP22304 550 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 CXCL12P48061 93 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 GRB10Q13322 594 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 TBC1D25Q3MII6 688 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 CST9Q5W186 159 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 IRGQQ8WZA9 623 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 TMEM237Q96Q45 408 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 DPH5Q9H2P9 285 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 NXF3Q9H4D5 531 aaKnown RBP11.74□□□□□ -0.53
SEH1L-208ENST00000590843 AP4E1Q9UPM8 1137 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 YIPF1Q9Y548 306 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 MAFBQ9Y5Q3 323 aaPredicted RBP11.74□□□□□ -0.53
SEH1L-208ENST00000590843 ENPP3O14638 875 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 HNRNPH1P31943 449 aaKnown RBP11.74□□□□□ -0.53
SEH1L-208ENST00000590843 CSTF2P33240 577 aaKnown RBP eCLIP11.74□□□□□ -0.53
SEH1L-208ENST00000590843 OCRLQ01968 901 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 NAT16Q8N8M0 369 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 FAM172AQ8WUF8 416 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 CPA5Q8WXQ8 436 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 UHRF1Q96T88 793 aaPredicted RBP11.74□□□□□ -0.53
SEH1L-208ENST00000590843 VAT1Q99536 393 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 NCKIPSDQ9NZQ3 722 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 CD274Q9NZQ7 290 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 COLEC10Q9Y6Z7 277 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 ELFN1P0C7U0 828 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 RPP38P78345 283 aaKnown RBP11.74□□□□□ -0.53
SEH1L-208ENST00000590843 C9orf57Q5W0N0 161 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 ATG16L1Q676U5 607 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 KBTBD6Q86V97 674 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 WHAMMQ8TF30 809 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 UBE2E3Q969T4 207 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 MTBPQ96DY7 904 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 IGSF21Q96ID5 467 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 ZNF333Q96JL9 665 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 HES2Q9Y543 173 aa11.74□□□□□ -0.53
SEH1L-208ENST00000590843 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.73□□□□□ -0.53
SEH1L-208ENST00000590843 KCNA2P16389 499 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 ATP4AP20648 1035 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 TLX1P31314 330 aaPredicted RBP11.73□□□□□ -0.53
SEH1L-208ENST00000590843 NCALDP61601 193 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 TAF10Q12962 218 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 IZUMO3Q5VZ72 239 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 FAM35AQ86V20 835 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 EID3Q8N140 333 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 NT5MQ9NPB1 228 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 CLIC5Q9NZA1 410 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 ZNHIT2Q9UHR6 403 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 LRRC8EQ6NSJ5 796 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 ZC3H18Q86VM9 953 aaKnown RBP11.73□□□□□ -0.53
SEH1L-208ENST00000590843 QRFPRQ96P65 431 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 CBWD1Q9BRT8 395 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 WWOXQ9NZC7 414 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 PIK3C2AO00443 1686 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 PMPCBO75439 489 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 CATP04040 527 aaKnown RBP11.73□□□□□ -0.53
SEH1L-208ENST00000590843 GTF2E2P29084 291 aaKnown RBP11.73□□□□□ -0.53
SEH1L-208ENST00000590843 ACAP1Q15027 740 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 ANKRD52Q8NB46 1076 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 SPATA17Q96L03 361 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 LRGUKQ96M69 825 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 OSBPL9Q96SU4 736 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 FAM167BQ9BTA0 163 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 GDF3Q9NR23 364 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 ORC6Q9Y5N6 252 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 SRP72O76094 671 aaKnown RBP11.73□□□□□ -0.53
SEH1L-208ENST00000590843 JUPP14923 745 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 DDR2Q16832 855 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 SERINC5Q86VE9 423 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 KCTD13Q8WZ19 329 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 WNT8BQ93098 351 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 AGAP3Q96P47 875 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 HERC2P3Q9BVR0 1158 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 TRHDEQ9UKU6 1024 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 IRAK2O43187 625 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 FTH1P02794 183 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 HTR7P34969 479 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 RABGGTBP53611 331 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 AIF1P55008 147 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 SIM2Q14190 667 aaPredicted RBP11.73□□□□□ -0.53
SEH1L-208ENST00000590843 ALG11Q2TAA5 492 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms