RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 RFWD3Q6PCD5 774 aa23.25■■□□□ 1.31
MBD3-208ENST00000590830 UNC45BQ8IWX7 931 aa23.25■■□□□ 1.31
MBD3-208ENST00000590830 NEK11Q8NG66 645 aa23.25■■□□□ 1.31
MBD3-208ENST00000590830 KCNV2Q8TDN2 545 aa23.25■■□□□ 1.31
MBD3-208ENST00000590830 PCMTD1Q96MG8 357 aaPredicted RBP23.25■■□□□ 1.31
MBD3-208ENST00000590830 SERPINB11Q96P15 392 aa23.25■■□□□ 1.31
MBD3-208ENST00000590830 ACOX2Q99424 681 aa23.25■■□□□ 1.31
MBD3-208ENST00000590830 PDCL3Q9H2J4 239 aa23.25■■□□□ 1.31
MBD3-208ENST00000590830 RTN4Q9NQC3 1192 aaKnown RBP23.25■■□□□ 1.31
MBD3-208ENST00000590830 ASNSD1Q9NWL6 643 aa23.25■■□□□ 1.31
MBD3-208ENST00000590830 SMG5Q9UPR3 1016 aaKnown RBP23.25■■□□□ 1.31
MBD3-208ENST00000590830 SLC27A6Q9Y2P4 619 aa23.25■■□□□ 1.31
MBD3-208ENST00000590830 APBB3O95704 486 aa23.24■■□□□ 1.31
MBD3-208ENST00000590830 TRUB2O95900 331 aaKnown RBP23.24■■□□□ 1.31
MBD3-208ENST00000590830 CYBBP04839 570 aa23.24■■□□□ 1.31
MBD3-208ENST00000590830 HOXD9P28356 352 aaPredicted RBP23.24■■□□□ 1.31
MBD3-208ENST00000590830 GABRB2P47870 512 aa23.24■■□□□ 1.31
MBD3-208ENST00000590830 SLC6A3Q01959 620 aa23.24■■□□□ 1.31
MBD3-208ENST00000590830 NNTQ13423 1086 aa23.24■■□□□ 1.31
MBD3-208ENST00000590830 LPAL2Q16609 132 aa23.24■■□□□ 1.31
MBD3-208ENST00000590830 HSF5Q4G112 596 aaPredicted RBP23.24■■□□□ 1.31
MBD3-208ENST00000590830 MPPE1Q53F39 396 aa23.24■■□□□ 1.31
MBD3-208ENST00000590830 ZC3H12AQ5D1E8 599 aaKnown RBP23.24■■□□□ 1.31
MBD3-208ENST00000590830 DCLK2Q8N568 766 aa23.24■■□□□ 1.31
MBD3-208ENST00000590830 ZNF513Q8N8E2 541 aaPredicted RBP23.24■■□□□ 1.31
MBD3-208ENST00000590830 TMA16Q96EY4 203 aaKnown RBP23.24■■□□□ 1.31
MBD3-208ENST00000590830 TRIM62Q9BVG3 475 aa23.24■■□□□ 1.31
MBD3-208ENST00000590830 EBF1Q9UH73 591 aa23.24■■□□□ 1.31
MBD3-208ENST00000590830 XPO7Q9UIA9 1087 aaKnown RBP23.24■■□□□ 1.31
MBD3-208ENST00000590830 DAAM1Q9Y4D1 1078 aa23.24■■□□□ 1.31
MBD3-208ENST00000590830 CEP83Q9Y592 693 aa23.24■■□□□ 1.31
MBD3-208ENST00000590830 FRYLO94915 3013 aa23.24■■□□□ 1.31
MBD3-208ENST00000590830 PTPRZ1P23471 2315 aaPredicted RBP23.24■■□□□ 1.31
MBD3-208ENST00000590830 AXIN1O15169 862 aa23.23■■□□□ 1.31
MBD3-208ENST00000590830 IRAK2O43187 625 aa23.23■■□□□ 1.31
MBD3-208ENST00000590830 CNR2P34972 360 aa23.23■■□□□ 1.31
MBD3-208ENST00000590830 STAT1P42224 750 aa23.23■■□□□ 1.31
MBD3-208ENST00000590830 SLC11A2P49281 568 aa23.23■■□□□ 1.31
MBD3-208ENST00000590830 FMO1Q01740 532 aa23.23■■□□□ 1.31
MBD3-208ENST00000590830 SIM2Q14190 667 aaPredicted RBP23.23■■□□□ 1.31
MBD3-208ENST00000590830 C2CD6Q53TS8 623 aa23.23■■□□□ 1.31
MBD3-208ENST00000590830 PIK3R6Q5UE93 754 aa23.23■■□□□ 1.31
MBD3-208ENST00000590830 NUDT18Q6ZVK8 323 aa23.23■■□□□ 1.31
MBD3-208ENST00000590830 SLC26A9Q7LBE3 791 aa23.23■■□□□ 1.31
MBD3-208ENST00000590830 TSTD1Q8NFU3 115 aa23.23■■□□□ 1.31
MBD3-208ENST00000590830 CPA5Q8WXQ8 436 aa23.23■■□□□ 1.31
MBD3-208ENST00000590830 NAP1L5Q96NT1 182 aaPredicted RBP23.23■■□□□ 1.31
MBD3-208ENST00000590830 SYNCQ9H7C4 482 aa23.23■■□□□ 1.31
MBD3-208ENST00000590830 CBX8Q9HC52 389 aa23.23■■□□□ 1.31
MBD3-208ENST00000590830 EP300Q09472 2414 aaPredicted RBP23.23■■□□□ 1.31
MBD3-208ENST00000590830 OTOGLQ3ZCN5 2332 aa23.22■■□□□ 1.31
MBD3-208ENST00000590830 HSF2BPO75031 334 aa23.22■■□□□ 1.31
MBD3-208ENST00000590830 LSM8O95777 96 aaKnown RBP23.22■■□□□ 1.31
MBD3-208ENST00000590830 WASP42768 502 aa23.22■■□□□ 1.31
MBD3-208ENST00000590830 DGKEP52429 567 aa23.22■■□□□ 1.31
MBD3-208ENST00000590830 NOMO3P69849 1222 aa23.22■■□□□ 1.31
MBD3-208ENST00000590830 CDR2Q01850 454 aa23.22■■□□□ 1.31
MBD3-208ENST00000590830 EOGTQ5NDL2 527 aa23.22■■□□□ 1.31
MBD3-208ENST00000590830 NAA35Q5VZE5 725 aa23.22■■□□□ 1.31
MBD3-208ENST00000590830 TMEM215Q68D42 235 aa23.22■■□□□ 1.31
MBD3-208ENST00000590830 RNF43Q68DV7 783 aa23.22■■□□□ 1.31
MBD3-208ENST00000590830 RASSF3Q86WH2 238 aa23.22■■□□□ 1.31
MBD3-208ENST00000590830 ERICH1Q86X53 443 aa23.22■■□□□ 1.31
MBD3-208ENST00000590830 ZNF397Q8NF99 534 aaPredicted RBP23.22■■□□□ 1.31
MBD3-208ENST00000590830 IPO4Q8TEX9 1081 aaKnown RBP23.22■■□□□ 1.31
MBD3-208ENST00000590830 C18orf8Q96DM3 657 aa23.22■■□□□ 1.31
MBD3-208ENST00000590830 SPAG5Q96R06 1193 aa23.22■■□□□ 1.31
MBD3-208ENST00000590830 PCDHB18PQ96TA0 734 aa23.22■■□□□ 1.31
MBD3-208ENST00000590830 SLC2A11Q9BYW1 496 aa23.22■■□□□ 1.31
MBD3-208ENST00000590830 ADAM33Q9BZ11 813 aa23.22■■□□□ 1.31
MBD3-208ENST00000590830 CALCOCO1Q9P1Z2 691 aa23.22■■□□□ 1.31
MBD3-208ENST00000590830 FAM186AA6NE01 2351 aa23.21■■□□□ 1.31
MBD3-208ENST00000590830 CYP1A1P04798 512 aaPredicted RBP23.21■■□□□ 1.31
MBD3-208ENST00000590830 SNX16P57768 344 aa23.21■■□□□ 1.31
MBD3-208ENST00000590830 CDK17Q00537 523 aa23.21■■□□□ 1.31
MBD3-208ENST00000590830 PRR23BQ6ZRT6 265 aa23.21■■□□□ 1.31
MBD3-208ENST00000590830 ZNF677Q86XU0 584 aa23.21■■□□□ 1.31
MBD3-208ENST00000590830 XYLT1Q86Y38 959 aa23.21■■□□□ 1.31
MBD3-208ENST00000590830 GAB3Q8WWW8 586 aa23.21■■□□□ 1.31
MBD3-208ENST00000590830 RUBCNQ92622 972 aa23.21■■□□□ 1.31
MBD3-208ENST00000590830 PRICKLE1Q96MT3 831 aaPredicted RBP23.21■■□□□ 1.31
MBD3-208ENST00000590830 NUCKS1Q9H1E3 243 aaKnown RBP23.21■■□□□ 1.31
MBD3-208ENST00000590830 CD248Q9HCU0 757 aa23.21■■□□□ 1.31
MBD3-208ENST00000590830 A0A1W2PQF6 199 aa23.2■■□□□ 1.3
MBD3-208ENST00000590830 KCNU1A8MYU2 1149 aa23.2■■□□□ 1.3
MBD3-208ENST00000590830 WASH3PC4AMC7 463 aa23.2■■□□□ 1.3
MBD3-208ENST00000590830 DAB1O75553 588 aa23.2■■□□□ 1.3
MBD3-208ENST00000590830 MOCS2O96007 188 aaPredicted RBP23.2■■□□□ 1.3
MBD3-208ENST00000590830 PTMSP20962 102 aa23.2■■□□□ 1.3
MBD3-208ENST00000590830 NTSR1P30989 418 aa23.2■■□□□ 1.3
MBD3-208ENST00000590830 ZNF445P59923 1031 aa23.2■■□□□ 1.3
MBD3-208ENST00000590830 OTUD1Q5VV17 481 aaPredicted RBP23.2■■□□□ 1.3
MBD3-208ENST00000590830 ANO7Q6IWH7 933 aa23.2■■□□□ 1.3
MBD3-208ENST00000590830 LUZP1Q86V48 1076 aa23.2■■□□□ 1.3
MBD3-208ENST00000590830 ZDHHC17Q8IUH5 632 aa23.2■■□□□ 1.3
MBD3-208ENST00000590830 MDGA1Q8NFP4 955 aa23.2■■□□□ 1.3
MBD3-208ENST00000590830 WFDC5Q8TCV5 224 aa23.2■■□□□ 1.3
MBD3-208ENST00000590830 DDIT4Q9NX09 232 aa23.2■■□□□ 1.3
MBD3-208ENST00000590830 GVINP1Q7Z2Y8 2422 aa23.19■■□□□ 1.3
MBD3-208ENST00000590830 DCLK1O15075 740 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms