RNA–Protein interactions for RNA: ENST00000590653.5

LINC01140-210, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,315 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-210ENST00000590653 PEX10O60683 326 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 NPM3O75607 178 aaKnown RBP11.26□□□□□ -0.61
LINC01140-210ENST00000590653 MICAL2O94851 1124 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 ERVK-10P10266 1014 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 RALBP11234 206 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 MLH1P40692 756 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 CAPSQ13938 189 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 NRF1Q16656 503 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 ZNF667Q5HYK9 610 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 METTL25Q8N6Q8 603 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 ZFP28Q8NHY6 868 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 RAB3IL1Q8TBN0 382 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 EBNA1BP2Q99848 306 aaKnown RBP11.26□□□□□ -0.61
LINC01140-210ENST00000590653 PORCNQ9H237 461 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 EMCNQ9ULC0 261 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 ARHGAP26Q9UNA1 814 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 AP4B1Q9Y6B7 739 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 H3BSA7 217 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 CCNT2O60583 730 aaKnown RBP11.26□□□□□ -0.61
LINC01140-210ENST00000590653 DKC1O60832 514 aaKnown RBP eCLIP11.26□□□□□ -0.61
LINC01140-210ENST00000590653 TNNC2P02585 160 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 ALDOAP04075 364 aaKnown RBP11.26□□□□□ -0.61
LINC01140-210ENST00000590653 TSHRP16473 764 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 PRKCHP24723 683 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 ASPAP45381 313 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 RPL5P46777 297 aaKnown RBP11.26□□□□□ -0.61
LINC01140-210ENST00000590653 ATXN1P54253 815 aaKnown RBP11.26□□□□□ -0.61
LINC01140-210ENST00000590653 OLIG2Q13516 323 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 MYLK3Q32MK0 819 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 SLC9B1Q4ZJI4 515 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 TRNP1Q6NT89 227 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 B3GNT6Q6ZMB0 384 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 AMIGO2Q86SJ2 522 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 BRSK2Q8IWQ3 736 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 TMEM192Q8IY95 271 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 RTKN2Q8IZC4 609 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 PQLC1Q8N2U9 271 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 RNF149Q8NC42 400 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 SIGLEC10Q96LC7 697 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 SDCBP2Q9H190 292 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 DHX35Q9H5Z1 703 aaKnown RBP11.26□□□□□ -0.61
LINC01140-210ENST00000590653 COG4Q9H9E3 785 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 XPNPEP3Q9NQH7 507 aa11.26□□□□□ -0.61
LINC01140-210ENST00000590653 SMIM31A0A1B0GVY4 71 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 INO80B-WBP1J3KQ70 363 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 PLIN3O60664 434 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 CRTAMO95727 393 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 GPD1P21695 349 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 PCSK6P29122 969 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 FSTL1Q12841 308 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 FLOT2Q14254 428 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 SNX32Q86XE0 403 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 MAP7D3Q8IWC1 876 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 ZNF781Q8N8C0 355 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 PCDH19Q8TAB3 1148 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 ACTRT2Q8TDY3 377 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 NLRP4Q96MN2 994 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 INO80BQ9C086 356 aaPredicted RBP11.25□□□□□ -0.61
LINC01140-210ENST00000590653 UNKQ9C0B0 810 aaKnown RBP11.25□□□□□ -0.61
LINC01140-210ENST00000590653 SEMA6AQ9H2E6 1030 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 TMEM165Q9HC07 324 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 HSFX1Q9UBD0 423 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 ZNF180Q9UJW8 692 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 SSX2IPQ9Y2D8 614 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 SYNJ2BP-COX16A0A087WUM0 186 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 H3BNX3 289 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 TRDMT1O14717 391 aaKnown RBP11.25□□□□□ -0.61
LINC01140-210ENST00000590653 DNAJA2O60884 412 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 IL1BP01584 269 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 SERPINE1P05121 402 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 HNRNPCP07910 306 aaKnown RBP eCLIP11.25□□□□□ -0.61
LINC01140-210ENST00000590653 SMIM18P0DKX4 95 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 RGS2P41220 211 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 NAMPTP43490 491 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 CCR10P46092 362 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 ABHD15Q6UXT9 468 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 WDR49Q8IV35 697 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 PQLC3Q8N755 202 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 C12orf29Q8N999 325 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 OR52B2Q96RD2 323 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 FRMD8P1Q9BZ68 369 aaPredicted RBP11.25□□□□□ -0.61
LINC01140-210ENST00000590653 NRDE2Q9H7Z3 1164 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 FAM49BQ9NUQ9 324 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 COX16Q9P0S2 106 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 MFHAS1Q9Y4C4 1052 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 BIRC5O15392 142 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 MED7O43513 233 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 TMCC1O94876 653 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 OATP04181 439 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 CXCL8P10145 99 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 XRCC1P18887 633 aaPredicted RBP11.25□□□□□ -0.61
LINC01140-210ENST00000590653 FGFR3P22607 806 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 MGAT1P26572 445 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 TCF7P36402 384 aaPredicted RBP11.25□□□□□ -0.61
LINC01140-210ENST00000590653 PHKA2P46019 1235 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 GABRB2P47870 512 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 HDAC4P56524 1084 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 KLF10Q13118 480 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 PCLAFQ15004 111 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 SCUBE3Q8IX30 993 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms