RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 DHX15O43143 795 aaKnown RBP17.58■□□□□ 0.41
SMARCA4-215ENST00000590574 VNN1O95497 513 aa17.58■□□□□ 0.41
SMARCA4-215ENST00000590574 NET1Q7Z628 596 aaPredicted RBP17.58■□□□□ 0.41
SMARCA4-215ENST00000590574 C12orf29Q8N999 325 aa17.58■□□□□ 0.41
SMARCA4-215ENST00000590574 PIWIL2Q8TC59 973 aaKnown RBP17.58■□□□□ 0.41
SMARCA4-215ENST00000590574 ATP6V1C1P21283 382 aa17.58■□□□□ 0.41
SMARCA4-215ENST00000590574 ADGRD1Q6QNK2 874 aa17.58■□□□□ 0.41
SMARCA4-215ENST00000590574 KCNMB4Q86W47 210 aa17.58■□□□□ 0.41
SMARCA4-215ENST00000590574 ADAM32Q8TC27 787 aa17.58■□□□□ 0.41
SMARCA4-215ENST00000590574 LHX5Q9H2C1 402 aa17.58■□□□□ 0.41
SMARCA4-215ENST00000590574 WARS2Q9UGM6 360 aaKnown RBP17.58■□□□□ 0.41
SMARCA4-215ENST00000590574 MYH15Q9Y2K3 1946 aa17.58■□□□□ 0.4
SMARCA4-215ENST00000590574 E2F6O75461 281 aa17.58■□□□□ 0.4
SMARCA4-215ENST00000590574 CFHP08603 1231 aa17.58■□□□□ 0.4
SMARCA4-215ENST00000590574 CHD4Q14839 1912 aa17.58■□□□□ 0.4
SMARCA4-215ENST00000590574 HMBSP08397 361 aa17.58■□□□□ 0.4
SMARCA4-215ENST00000590574 YWHAZP63104 245 aaKnown RBP17.58■□□□□ 0.4
SMARCA4-215ENST00000590574 STX5Q13190 355 aa17.58■□□□□ 0.4
SMARCA4-215ENST00000590574 TDRPQ86YL5 185 aa17.58■□□□□ 0.4
SMARCA4-215ENST00000590574 KYQ8NBH2 561 aa17.58■□□□□ 0.4
SMARCA4-215ENST00000590574 DTNBP1Q96EV8 351 aa17.58■□□□□ 0.4
SMARCA4-215ENST00000590574 CELF6Q96J87 481 aaKnown RBP17.58■□□□□ 0.4
SMARCA4-215ENST00000590574 WNK4Q96J92 1243 aa17.58■□□□□ 0.4
SMARCA4-215ENST00000590574 PPP1R2P1Q96PQ5 205 aa17.58■□□□□ 0.4
SMARCA4-215ENST00000590574 RABGEF1Q9UJ41 708 aa17.58■□□□□ 0.4
SMARCA4-215ENST00000590574 ACOT9Q9Y305 439 aa17.58■□□□□ 0.4
SMARCA4-215ENST00000590574 AKAP11Q9UKA4 1901 aa17.58■□□□□ 0.4
SMARCA4-215ENST00000590574 GOLGA8TH3BQL2 631 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 TRIM13O60858 407 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 FARP2O94887 1054 aaPredicted RBP17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 ASMTLO95671 621 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 TSTA3Q13630 321 aaPredicted RBP17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 TAS2R42Q7RTR8 314 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 SLC44A1Q8WWI5 657 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 ATRNL1Q5VV63 1379 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 PSMB4P28070 264 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 ETFBP38117 255 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 ABCG1P45844 678 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 GEMP55040 296 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 RIPOR1Q6ZS17 1223 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 RIOX2Q8IUF8 465 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 C2orf69Q8N8R5 385 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 NTPCRQ9BSD7 190 aaKnown RBP17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 FICDQ9BVA6 458 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 PHACTR1Q9C0D0 580 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 ASCC2Q9H1I8 757 aaPredicted RBP17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 PPP2R3BQ9Y5P8 575 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 A0A0A0MRY4 1105 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 ARL2P36404 184 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 HSPA13P48723 471 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.57■□□□□ 0.42e-7■■■■■ 278.5
SMARCA4-215ENST00000590574 CDC26Q8NHZ8 85 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 LMO3Q8TAP4 145 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 SLC16A10Q8TF71 515 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 CYGBQ8WWM9 190 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 SPATA13Q96N96 652 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 EBNA1BP2Q99848 306 aaKnown RBP17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 HACD3Q9P035 362 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 CHKBQ9Y259 395 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 NOVP48745 357 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 GDF10P55107 478 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 NOMO1Q15155 1222 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 AGAP9Q5VTM2 703 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 OLFML2BQ68BL8 750 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 TFAP2BQ92481 460 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 MRGBPQ9NV56 204 aa17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 ZC3H4Q9UPT8 1303 aaKnown RBP17.57■□□□□ 0.4
SMARCA4-215ENST00000590574 PLOD1Q02809 727 aaPredicted RBP17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 C16orf87Q6PH81 154 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 UBE2OQ9C0C9 1292 aaKnown RBP17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 ARHGEF3Q9NR81 526 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 EFR3BQ9Y2G0 817 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 PPARGP37231 505 aaPredicted RBP17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 WDR4P57081 412 aaKnown RBP17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 IL31Q6EBC2 164 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 KIAA1841Q6NSI8 718 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 SLC27A1Q6PCB7 646 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 SUPT3HB4E1H0 165 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 SUPT3HO75486 399 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 F9P00740 461 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 HADHAP40939 763 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 NT5DC4Q86YG4 428 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 GTF3C2Q8WUA4 911 aaPredicted RBP17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 CAAP1Q9H8G2 361 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 RPL26L1Q9UNX3 145 aaKnown RBP17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 ADAMTSL3P82987 1691 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 ZBBXA8MT70 800 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 GSC2O15499 205 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 TCEA3O75764 348 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 SUPT7LO94864 414 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 FBXO21O94952 628 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 NAB1Q13506 487 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 POU6F1Q14863 301 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 CXorf38Q8TB03 319 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 SEC14L1Q92503 715 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 EDEM1Q92611 657 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 ZNF670Q9BS34 389 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 KATNAL1Q9BW62 490 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 TJP2Q9UDY2 1190 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 MYH10P35580 1976 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms