RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 C10orf120Q5SQS8 335 aa18.19■□□□□ 0.5
RETREG3-210ENST00000590541 TMEM215Q68D42 235 aa18.19■□□□□ 0.5
RETREG3-210ENST00000590541 CLEC20AQ6ZU45 233 aa18.19■□□□□ 0.5
RETREG3-210ENST00000590541 ANKS1BQ7Z6G8 1248 aa18.19■□□□□ 0.5
RETREG3-210ENST00000590541 TMPRSS12Q86WS5 348 aa18.19■□□□□ 0.5
RETREG3-210ENST00000590541 NELFCDQ8IXH7 590 aa18.19■□□□□ 0.5
RETREG3-210ENST00000590541 SORCS1Q8WY21 1168 aa18.19■□□□□ 0.5
RETREG3-210ENST00000590541 IGSF8Q969P0 613 aa18.19■□□□□ 0.5
RETREG3-210ENST00000590541 CCDC47Q96A33 483 aaKnown RBP18.19■□□□□ 0.5
RETREG3-210ENST00000590541 JAKMIP2Q96AA8 810 aa18.19■□□□□ 0.5
RETREG3-210ENST00000590541 CCDC34Q96HJ3 373 aa18.19■□□□□ 0.5
RETREG3-210ENST00000590541 CABIN1Q9Y6J0 2220 aa18.18■□□□□ 0.5
RETREG3-210ENST00000590541 MUC22E2RYF6 1773 aaPredicted RBP18.18■□□□□ 0.5
RETREG3-210ENST00000590541 TLX3O43711 291 aaPredicted RBP18.18■□□□□ 0.5
RETREG3-210ENST00000590541 KLRC4O43908 158 aa18.18■□□□□ 0.5
RETREG3-210ENST00000590541 KIF20AO95235 890 aa18.18■□□□□ 0.5
RETREG3-210ENST00000590541 VNN1O95497 513 aa18.18■□□□□ 0.5
RETREG3-210ENST00000590541 FAM200BP0CF97 657 aa18.18■□□□□ 0.5
RETREG3-210ENST00000590541 PLA2G2AP14555 144 aa18.18■□□□□ 0.5
RETREG3-210ENST00000590541 ADORA2BP29275 332 aa18.18■□□□□ 0.5
RETREG3-210ENST00000590541 CASP1P29466 404 aa18.18■□□□□ 0.5
RETREG3-210ENST00000590541 CHKAP35790 457 aa18.18■□□□□ 0.5
RETREG3-210ENST00000590541 EIF2S3P41091 472 aaKnown RBP18.18■□□□□ 0.5
RETREG3-210ENST00000590541 BIRC3Q13489 604 aa18.18■□□□□ 0.5
RETREG3-210ENST00000590541 NCOA4Q13772 614 aa18.18■□□□□ 0.5
RETREG3-210ENST00000590541 EIF4HQ15056 248 aaKnown RBP18.18■□□□□ 0.5
RETREG3-210ENST00000590541 TEAD4Q15561 434 aa18.18■□□□□ 0.5
RETREG3-210ENST00000590541 SCD5Q86SK9 330 aa18.18■□□□□ 0.5
RETREG3-210ENST00000590541 OR2T3Q8NH03 318 aa18.18■□□□□ 0.5
RETREG3-210ENST00000590541 ZNF510Q9Y2H8 683 aa18.18■□□□□ 0.5
RETREG3-210ENST00000590541 RAI2Q9Y5P3 530 aa18.18■□□□□ 0.5
RETREG3-210ENST00000590541 MYH10P35580 1976 aa18.18■□□□□ 0.5
RETREG3-210ENST00000590541 NUMA1Q14980 2115 aa18.17■□□□□ 0.5
RETREG3-210ENST00000590541 KNL1Q8NG31 2342 aa18.17■□□□□ 0.5
RETREG3-210ENST00000590541 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.17■□□□□ 0.5
RETREG3-210ENST00000590541 PAPSS1O43252 624 aaPredicted RBP18.17■□□□□ 0.5
RETREG3-210ENST00000590541 CLSTN1O94985 981 aa18.17■□□□□ 0.5
RETREG3-210ENST00000590541 C4BPAP04003 597 aaKnown RBP18.17■□□□□ 0.5
RETREG3-210ENST00000590541 C7P10643 843 aa18.17■□□□□ 0.5
RETREG3-210ENST00000590541 CTSKP43235 329 aa18.17■□□□□ 0.5
RETREG3-210ENST00000590541 AP3M2P53677 418 aa18.17■□□□□ 0.5
RETREG3-210ENST00000590541 CLDN6P56747 220 aa18.17■□□□□ 0.5
RETREG3-210ENST00000590541 IL9RQ01113 521 aa18.17■□□□□ 0.5
RETREG3-210ENST00000590541 SERPINA13PQ6UXR4 307 aa18.17■□□□□ 0.5
RETREG3-210ENST00000590541 SLC9A9Q8IVB4 645 aa18.17■□□□□ 0.5
RETREG3-210ENST00000590541 GRAMD1CQ8IYS0 662 aa18.17■□□□□ 0.5
RETREG3-210ENST00000590541 ZNF276Q8N554 614 aa18.17■□□□□ 0.5
RETREG3-210ENST00000590541 ENGASEQ8NFI3 743 aa18.17■□□□□ 0.5
RETREG3-210ENST00000590541 BIRC7Q96CA5 298 aa18.17■□□□□ 0.5
RETREG3-210ENST00000590541 NXPE2Q96DL1 559 aa18.17■□□□□ 0.5
RETREG3-210ENST00000590541 CIPCQ9C0C6 399 aa18.17■□□□□ 0.5
RETREG3-210ENST00000590541 LHX5Q9H2C1 402 aa18.17■□□□□ 0.5
RETREG3-210ENST00000590541 FTSJ1Q9UET6 329 aa18.17■□□□□ 0.5
RETREG3-210ENST00000590541 NAGPAQ9UK23 515 aa18.17■□□□□ 0.5
RETREG3-210ENST00000590541 AGO1Q9UL18 857 aaKnown RBP18.17■□□□□ 0.5
RETREG3-210ENST00000590541 PCDHA5Q9Y5H7 936 aa18.17■□□□□ 0.5
RETREG3-210ENST00000590541 LRRIQ3A6PVS8 624 aaPredicted RBP18.16■□□□□ 0.5
RETREG3-210ENST00000590541 PDXKO00764 312 aa18.16■□□□□ 0.5
RETREG3-210ENST00000590541 TSPAN3O60637 253 aa18.16■□□□□ 0.5
RETREG3-210ENST00000590541 EXOC3O60645 756 aa18.16■□□□□ 0.5
RETREG3-210ENST00000590541 CORO1AP31146 461 aaKnown RBP18.16■□□□□ 0.5
RETREG3-210ENST00000590541 CLDN10P78369 228 aa18.16■□□□□ 0.5
RETREG3-210ENST00000590541 STK4Q13043 487 aa18.16■□□□□ 0.5
RETREG3-210ENST00000590541 CAMK2GQ13555 558 aaPredicted RBP18.16■□□□□ 0.5
RETREG3-210ENST00000590541 KMT5BQ4FZB7 885 aa18.16■□□□□ 0.5
RETREG3-210ENST00000590541 UNC93AQ86WB7 457 aa18.16■□□□□ 0.5
RETREG3-210ENST00000590541 PARD3BQ8TEW8 1205 aa18.16■□□□□ 0.5
RETREG3-210ENST00000590541 HNRNPABQ99729 332 aaKnown RBP18.16■□□□□ 0.5
RETREG3-210ENST00000590541 ORAI3Q9BRQ5 295 aa18.16■□□□□ 0.5
RETREG3-210ENST00000590541 PNPLA8Q9NP80 782 aa18.16■□□□□ 0.5
RETREG3-210ENST00000590541 KALRNO60229 2985 aa18.16■□□□□ 0.5
RETREG3-210ENST00000590541 HMBSP08397 361 aa18.15■□□□□ 0.5
RETREG3-210ENST00000590541 CD27P26842 260 aa18.15■□□□□ 0.5
RETREG3-210ENST00000590541 NDUFA8P51970 172 aa18.15■□□□□ 0.5
RETREG3-210ENST00000590541 KIF11P52732 1056 aa18.15■□□□□ 0.5
RETREG3-210ENST00000590541 NUCB2P80303 420 aa18.15■□□□□ 0.5
RETREG3-210ENST00000590541 COG7P83436 770 aa18.15■□□□□ 0.5
RETREG3-210ENST00000590541 E2F5Q15329 346 aa18.15■□□□□ 0.5
RETREG3-210ENST00000590541 ZNF843Q8N446 348 aa18.15■□□□□ 0.5
RETREG3-210ENST00000590541 LSM14AQ8ND56 463 aaKnown RBP18.15■□□□□ 0.5
RETREG3-210ENST00000590541 TWNKQ96RR1 684 aa18.15■□□□□ 0.5
RETREG3-210ENST00000590541 TMEM245Q9H330 911 aa18.15■□□□□ 0.5
RETREG3-210ENST00000590541 RASAL2Q9UJF2 1139 aa18.15■□□□□ 0.5
RETREG3-210ENST00000590541 PCDHGA1Q9Y5H4 931 aa18.15■□□□□ 0.5
RETREG3-210ENST00000590541 COL5A1P20908 1838 aaPredicted RBP18.14■□□□□ 0.5
RETREG3-210ENST00000590541 CBX4O00257 560 aa18.14■□□□□ 0.49
RETREG3-210ENST00000590541 RHOBTB3O94955 611 aa18.14■□□□□ 0.49
RETREG3-210ENST00000590541 SEMA4FO95754 770 aa18.14■□□□□ 0.49
RETREG3-210ENST00000590541 RPN1P04843 607 aaKnown RBP18.14■□□□□ 0.49
RETREG3-210ENST00000590541 JUPP14923 745 aa18.14■□□□□ 0.49
RETREG3-210ENST00000590541 ASPAP45381 313 aa18.14■□□□□ 0.49
RETREG3-210ENST00000590541 PSEN1P49768 467 aa18.14■□□□□ 0.49
RETREG3-210ENST00000590541 SEMG2Q02383 582 aa18.14■□□□□ 0.49
RETREG3-210ENST00000590541 C6orf118Q5T5N4 469 aa18.14■□□□□ 0.49
RETREG3-210ENST00000590541 LRRC69Q6ZNQ3 347 aa18.14■□□□□ 0.49
RETREG3-210ENST00000590541 CCDC186Q7Z3E2 898 aa18.14■□□□□ 0.49
RETREG3-210ENST00000590541 ZNF605Q86T29 641 aa18.14■□□□□ 0.49
RETREG3-210ENST00000590541 TADA2BQ86TJ2 420 aa18.14■□□□□ 0.49
RETREG3-210ENST00000590541 DENND1CQ8IV53 801 aa18.14■□□□□ 0.49
RETREG3-210ENST00000590541 CPXM2Q8N436 756 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms