RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	MRPS21	P82921	87 aa	Known RBP	18.01	■□□□□ 0.47
MBD1-221	ENST00000589867	CDR2	Q01850	454 aa		18.01	■□□□□ 0.47
MBD1-221	ENST00000589867	SLC6A3	Q01959	620 aa		18.01	■□□□□ 0.47
MBD1-221	ENST00000589867	DMC1	Q14565	340 aa		18.01	■□□□□ 0.47
MBD1-221	ENST00000589867	NR1I3	Q14994	352 aa		18.01	■□□□□ 0.47
MBD1-221	ENST00000589867	ADGRF1	Q5T601	910 aa		18.01	■□□□□ 0.47
MBD1-221	ENST00000589867	NAA35	Q5VZE5	725 aa		18.01	■□□□□ 0.47
MBD1-221	ENST00000589867	HEATR6	Q6AI08	1181 aa	Known RBP	18.01	■□□□□ 0.47
MBD1-221	ENST00000589867	GRAMD4	Q6IC98	578 aa		18.01	■□□□□ 0.47
MBD1-221	ENST00000589867	OR6B2	Q6IFH4	312 aa		18.01	■□□□□ 0.47
MBD1-221	ENST00000589867	RFWD3	Q6PCD5	774 aa		18.01	■□□□□ 0.47
MBD1-221	ENST00000589867	XYLT1	Q86Y38	959 aa		18.01	■□□□□ 0.47
MBD1-221	ENST00000589867	ALLC	Q8N6M5	410 aa		18.01	■□□□□ 0.47
MBD1-221	ENST00000589867	CPA5	Q8WXQ8	436 aa		18.01	■□□□□ 0.47
MBD1-221	ENST00000589867	GOLGA1	Q92805	767 aa		18.01	■□□□□ 0.47
MBD1-221	ENST00000589867	NKD2	Q969F2	451 aa	Predicted RBP	18.01	■□□□□ 0.47
MBD1-221	ENST00000589867	AZIN2	Q96A70	460 aa		18.01	■□□□□ 0.47
MBD1-221	ENST00000589867	SERPINB11	Q96P15	392 aa		18.01	■□□□□ 0.47
MBD1-221	ENST00000589867	HHIP	Q96QV1	700 aa		18.01	■□□□□ 0.47
MBD1-221	ENST00000589867	SYT11	Q9BT88	431 aa		18.01	■□□□□ 0.47
MBD1-221	ENST00000589867	TTYH3	Q9C0H2	523 aa		18.01	■□□□□ 0.47
MBD1-221	ENST00000589867	CD248	Q9HCU0	757 aa		18.01	■□□□□ 0.47
MBD1-221	ENST00000589867	MMP17	Q9ULZ9	603 aa		18.01	■□□□□ 0.47
MBD1-221	ENST00000589867	SLC27A6	Q9Y2P4	619 aa		18.01	■□□□□ 0.47
MBD1-221	ENST00000589867	TBC1D3B	A6NDS4	549 aa		18	■□□□□ 0.47
MBD1-221	ENST00000589867	HSF2BP	O75031	334 aa		18	■□□□□ 0.47
MBD1-221	ENST00000589867	ATG13	O75143	517 aa		18	■□□□□ 0.47
MBD1-221	ENST00000589867	LSM8	O95777	96 aa	Known RBP	18	■□□□□ 0.47
MBD1-221	ENST00000589867	PTP4A2	Q12974	167 aa		18	■□□□□ 0.47
MBD1-221	ENST00000589867	GEN1	Q17RS7	908 aa		18	■□□□□ 0.47
MBD1-221	ENST00000589867	DCAF6	Q58WW2	860 aa		18	■□□□□ 0.47
MBD1-221	ENST00000589867	ZC3H12A	Q5D1E8	599 aa	Known RBP	18	■□□□□ 0.47
MBD1-221	ENST00000589867	EFHC1	Q5JVL4	640 aa		18	■□□□□ 0.47
MBD1-221	ENST00000589867	PIK3R6	Q5UE93	754 aa		18	■□□□□ 0.47
MBD1-221	ENST00000589867	EGFLAM	Q63HQ2	1017 aa		18	■□□□□ 0.47
MBD1-221	ENST00000589867	E4F1	Q66K89	784 aa	Predicted RBP	18	■□□□□ 0.47
MBD1-221	ENST00000589867	TMEM215	Q68D42	235 aa		18	■□□□□ 0.47
MBD1-221	ENST00000589867	WDR5B	Q86VZ2	330 aa		18	■□□□□ 0.47
MBD1-221	ENST00000589867	ZNF677	Q86XU0	584 aa		18	■□□□□ 0.47
MBD1-221	ENST00000589867	TXNDC5	Q8NBS9	432 aa	Known RBP	18	■□□□□ 0.47
MBD1-221	ENST00000589867	WFDC5	Q8TCV5	224 aa		18	■□□□□ 0.47
MBD1-221	ENST00000589867	PCMTD1	Q96MG8	357 aa	Predicted RBP	18	■□□□□ 0.47
MBD1-221	ENST00000589867	PRICKLE1	Q96MT3	831 aa	Predicted RBP	18	■□□□□ 0.47
MBD1-221	ENST00000589867	NOX5	Q96PH1	765 aa		18	■□□□□ 0.47
MBD1-221	ENST00000589867	XPO6	Q96QU8	1125 aa	Known RBP	18	■□□□□ 0.47
MBD1-221	ENST00000589867	ACOX2	Q99424	681 aa		18	■□□□□ 0.47
MBD1-221	ENST00000589867	NUCKS1	Q9H1E3	243 aa	Known RBP	18	■□□□□ 0.47
MBD1-221	ENST00000589867	EPC1	Q9H2F5	836 aa		18	■□□□□ 0.47
MBD1-221	ENST00000589867	ABCA7	Q8IZY2	2146 aa		17.99	■□□□□ 0.47
MBD1-221	ENST00000589867	KCNU1	A8MYU2	1149 aa		17.99	■□□□□ 0.47
MBD1-221	ENST00000589867		I6L893	689 aa	Predicted RBP	17.99	■□□□□ 0.47
MBD1-221	ENST00000589867	GFRA3	O60609	400 aa		17.99	■□□□□ 0.47
MBD1-221	ENST00000589867	DAB1	O75553	588 aa		17.99	■□□□□ 0.47
MBD1-221	ENST00000589867	KLF8	O95600	359 aa	Predicted RBP	17.99	■□□□□ 0.47
MBD1-221	ENST00000589867	UNG	P13051	313 aa	Predicted RBP	17.99	■□□□□ 0.47
MBD1-221	ENST00000589867	PBX1	P40424	430 aa		17.99	■□□□□ 0.47
MBD1-221	ENST00000589867	DGKG	P49619	791 aa		17.99	■□□□□ 0.47
MBD1-221	ENST00000589867	SKOR2	Q2VWA4	1001 aa	Predicted RBP	17.99	■□□□□ 0.47
MBD1-221	ENST00000589867	C10orf76	Q5T2E6	689 aa		17.99	■□□□□ 0.47
MBD1-221	ENST00000589867	NUGGC	Q68CJ6	796 aa		17.99	■□□□□ 0.47
MBD1-221	ENST00000589867	ZC3H14	Q6PJT7	736 aa	Known RBP	17.99	■□□□□ 0.47
MBD1-221	ENST00000589867	IRF2BP2	Q7Z5L9	587 aa		17.99	■□□□□ 0.47
MBD1-221	ENST00000589867	LONP2	Q86WA8	852 aa		17.99	■□□□□ 0.47
MBD1-221	ENST00000589867	UNC45B	Q8IWX7	931 aa		17.99	■□□□□ 0.47
MBD1-221	ENST00000589867	ATRIP	Q8WXE1	791 aa		17.99	■□□□□ 0.47
MBD1-221	ENST00000589867	NT5C3B	Q969T7	300 aa		17.99	■□□□□ 0.47
MBD1-221	ENST00000589867	C18orf8	Q96DM3	657 aa		17.99	■□□□□ 0.47
MBD1-221	ENST00000589867	LMLN	Q96KR4	655 aa		17.99	■□□□□ 0.47
MBD1-221	ENST00000589867	SPAG5	Q96R06	1193 aa		17.99	■□□□□ 0.47
MBD1-221	ENST00000589867	SEMA4A	Q9H3S1	761 aa		17.99	■□□□□ 0.47
MBD1-221	ENST00000589867	ANLN	Q9NQW6	1124 aa		17.99	■□□□□ 0.47
MBD1-221	ENST00000589867	TMEM59L	Q9UK28	342 aa		17.99	■□□□□ 0.47
MBD1-221	ENST00000589867	CEP83	Q9Y592	693 aa		17.99	■□□□□ 0.47
MBD1-221	ENST00000589867		A0A1W2PQC6	194 aa		17.98	■□□□□ 0.47
MBD1-221	ENST00000589867	CAPN9	O14815	690 aa		17.98	■□□□□ 0.47
MBD1-221	ENST00000589867	SCNN1A	P37088	669 aa		17.98	■□□□□ 0.47
MBD1-221	ENST00000589867	NRL	P54845	237 aa		17.98	■□□□□ 0.47
MBD1-221	ENST00000589867	FANCC	Q00597	558 aa		17.98	■□□□□ 0.47
MBD1-221	ENST00000589867	PPP2R5D	Q14738	602 aa		17.98	■□□□□ 0.47
MBD1-221	ENST00000589867	CRY1	Q16526	586 aa		17.98	■□□□□ 0.47
MBD1-221	ENST00000589867	MPPE1	Q53F39	396 aa		17.98	■□□□□ 0.47
MBD1-221	ENST00000589867	ARTN	Q5T4W7	220 aa		17.98	■□□□□ 0.47
MBD1-221	ENST00000589867	BNIPL	Q7Z465	357 aa		17.98	■□□□□ 0.47
MBD1-221	ENST00000589867	ERICH1	Q86X53	443 aa		17.98	■□□□□ 0.47
MBD1-221	ENST00000589867	CAMKK1	Q8N5S9	505 aa		17.98	■□□□□ 0.47
MBD1-221	ENST00000589867	SLC30A5	Q8TAD4	765 aa		17.98	■□□□□ 0.47
MBD1-221	ENST00000589867	IPO4	Q8TEX9	1081 aa	Known RBP	17.98	■□□□□ 0.47
MBD1-221	ENST00000589867	ACD	Q96AP0	544 aa		17.98	■□□□□ 0.47
MBD1-221	ENST00000589867	NPY6R	Q99463	290 aa		17.98	■□□□□ 0.47
MBD1-221	ENST00000589867	TRIM62	Q9BVG3	475 aa		17.98	■□□□□ 0.47
MBD1-221	ENST00000589867	SLC8A2	Q9UPR5	921 aa		17.98	■□□□□ 0.47
MBD1-221	ENST00000589867	CCDC163	A0A0D9SF12	145 aa		17.97	■□□□□ 0.47
MBD1-221	ENST00000589867	LMNA	P02545	664 aa	Known RBP	17.97	■□□□□ 0.47
MBD1-221	ENST00000589867	MMP8	P22894	467 aa		17.97	■□□□□ 0.47
MBD1-221	ENST00000589867	HLA-F	P30511	346 aa		17.97	■□□□□ 0.47
MBD1-221	ENST00000589867	NOS2	P35228	1153 aa		17.97	■□□□□ 0.47
MBD1-221	ENST00000589867	FLT3	P36888	993 aa		17.97	■□□□□ 0.47
MBD1-221	ENST00000589867	RPS24	P62847	133 aa	Known RBP	17.97	■□□□□ 0.47
MBD1-221	ENST00000589867	CDK17	Q00537	523 aa		17.97	■□□□□ 0.47
MBD1-221	ENST00000589867	ARID5A	Q03989	594 aa		17.97	■□□□□ 0.47

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