RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 MAN1A1P33908 653 aa14.14□□□□□ -0.15
VMP1-210ENST00000589823 PCK1P35558 622 aa14.14□□□□□ -0.15
VMP1-210ENST00000589823 GRM2Q14416 872 aa14.14□□□□□ -0.15
VMP1-210ENST00000589823 HADHQ16836 314 aaKnown RBP14.14□□□□□ -0.15
VMP1-210ENST00000589823 ZNF662Q6ZS27 426 aa14.14□□□□□ -0.15
VMP1-210ENST00000589823 DENND1CQ8IV53 801 aa14.14□□□□□ -0.15
VMP1-210ENST00000589823 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.14□□□□□ -0.15
VMP1-210ENST00000589823 RNF10Q8N5U6 811 aaKnown RBP14.14□□□□□ -0.15
VMP1-210ENST00000589823 RIN3Q8TB24 985 aa14.14□□□□□ -0.15
VMP1-210ENST00000589823 ATRIPQ8WXE1 791 aa14.14□□□□□ -0.15
VMP1-210ENST00000589823 RSAD2Q8WXG1 361 aa14.14□□□□□ -0.15
VMP1-210ENST00000589823 WBP2Q969T9 261 aa14.14□□□□□ -0.15
VMP1-210ENST00000589823 AZIN2Q96A70 460 aa14.14□□□□□ -0.15
VMP1-210ENST00000589823 OTUB2Q96DC9 234 aa14.14□□□□□ -0.15
VMP1-210ENST00000589823 LRRC3BQ96PB8 259 aa14.14□□□□□ -0.15
VMP1-210ENST00000589823 DDX50Q9BQ39 737 aaKnown RBP14.14□□□□□ -0.15
VMP1-210ENST00000589823 TRMT61BQ9BVS5 477 aaKnown RBP14.14□□□□□ -0.15
VMP1-210ENST00000589823 PLA2G2FQ9BZM2 168 aa14.14□□□□□ -0.15
VMP1-210ENST00000589823 TKTL2Q9H0I9 626 aa14.14□□□□□ -0.15
VMP1-210ENST00000589823 LZTFL1Q9NQ48 299 aa14.14□□□□□ -0.15
VMP1-210ENST00000589823 DUS2Q9NX74 493 aaKnown RBP14.14□□□□□ -0.15
VMP1-210ENST00000589823 ARHGEF38Q9NXL2 777 aa14.14□□□□□ -0.15
VMP1-210ENST00000589823 TRIM10Q9UDY6 481 aa14.14□□□□□ -0.15
VMP1-210ENST00000589823 AGO1Q9UL18 857 aaKnown RBP14.14□□□□□ -0.15
VMP1-210ENST00000589823 GUCA1BQ9UMX6 200 aa14.14□□□□□ -0.15
VMP1-210ENST00000589823 C5orf42Q9H799 3197 aa14.13□□□□□ -0.15
VMP1-210ENST00000589823 KCNU1A8MYU2 1149 aa14.13□□□□□ -0.15
VMP1-210ENST00000589823 SCAMP3O14828 347 aaKnown RBP14.13□□□□□ -0.15
VMP1-210ENST00000589823 CHADO15335 359 aa14.13□□□□□ -0.15
VMP1-210ENST00000589823 ACSL4O60488 711 aa14.13□□□□□ -0.15
VMP1-210ENST00000589823 GREM1O60565 184 aa14.13□□□□□ -0.15
VMP1-210ENST00000589823 BUB1BO60566 1050 aaPredicted RBP14.13□□□□□ -0.15
VMP1-210ENST00000589823 KLKB1P03952 638 aa14.13□□□□□ -0.15
VMP1-210ENST00000589823 MIPP30301 263 aa14.13□□□□□ -0.15
VMP1-210ENST00000589823 CHKAP35790 457 aa14.13□□□□□ -0.15
VMP1-210ENST00000589823 SLC1A1P43005 524 aa14.13□□□□□ -0.15
VMP1-210ENST00000589823 AIF1P55008 147 aa14.13□□□□□ -0.15
VMP1-210ENST00000589823 FCHO2Q0JRZ9 810 aa14.13□□□□□ -0.15
VMP1-210ENST00000589823 PDGFRLQ15198 375 aa14.13□□□□□ -0.15
VMP1-210ENST00000589823 RAB6CQ53S08 254 aa14.13□□□□□ -0.15
VMP1-210ENST00000589823 ACBD5Q5T8D3 534 aaPredicted RBP14.13□□□□□ -0.15
VMP1-210ENST00000589823 Q6ZNB5 142 aa14.13□□□□□ -0.15
VMP1-210ENST00000589823 DAAM2Q86T65 1068 aa14.13□□□□□ -0.15
VMP1-210ENST00000589823 BBS7Q8IWZ6 715 aa14.13□□□□□ -0.15
VMP1-210ENST00000589823 TPCN2Q8NHX9 752 aa14.13□□□□□ -0.15
VMP1-210ENST00000589823 OSCP1Q8WVF1 389 aa14.13□□□□□ -0.15
VMP1-210ENST00000589823 RPP25Q9BUL9 199 aaKnown RBP14.13□□□□□ -0.15
VMP1-210ENST00000589823 RAB6CQ9H0N0 254 aa14.13□□□□□ -0.15
VMP1-210ENST00000589823 PCSK1NQ9UHG2 260 aa14.13□□□□□ -0.15
VMP1-210ENST00000589823 SALL4Q9UJQ4 1053 aa14.13□□□□□ -0.15
VMP1-210ENST00000589823 PYCARDQ9ULZ3 195 aa14.13□□□□□ -0.15
VMP1-210ENST00000589823 WNT6Q9Y6F9 365 aa14.13□□□□□ -0.15
VMP1-210ENST00000589823 C19orf67A6NJJ6 358 aa14.12□□□□□ -0.15
VMP1-210ENST00000589823 SPOPO43791 374 aa14.12□□□□□ -0.15
VMP1-210ENST00000589823 MOCS3O95396 460 aa14.12□□□□□ -0.15
VMP1-210ENST00000589823 ASGR2P07307 311 aa14.12□□□□□ -0.15
VMP1-210ENST00000589823 GDI1P31150 447 aa14.12□□□□□ -0.15
VMP1-210ENST00000589823 ADRA1BP35368 520 aa14.12□□□□□ -0.15
VMP1-210ENST00000589823 EFHC2Q5JST6 749 aa14.12□□□□□ -0.15
VMP1-210ENST00000589823 TJAP1Q5JTD0 557 aa14.12□□□□□ -0.15
VMP1-210ENST00000589823 ADGRF1Q5T601 910 aa14.12□□□□□ -0.15
VMP1-210ENST00000589823 C11orf63Q6NUN7 778 aa14.12□□□□□ -0.15
VMP1-210ENST00000589823 SLFN11Q7Z7L1 901 aa14.12□□□□□ -0.15
VMP1-210ENST00000589823 CHSY1Q86X52 802 aa14.12□□□□□ -0.15
VMP1-210ENST00000589823 SYCE1Q8N0S2 351 aa14.12□□□□□ -0.15
VMP1-210ENST00000589823 SLC44A3Q8N4M1 653 aa14.12□□□□□ -0.15
VMP1-210ENST00000589823 ARFGAP1Q8N6T3 406 aa14.12□□□□□ -0.15
VMP1-210ENST00000589823 ATP2A3Q93084 1043 aa14.12□□□□□ -0.15
VMP1-210ENST00000589823 NTAN1Q96AB6 310 aa14.12□□□□□ -0.15
VMP1-210ENST00000589823 HAPLN3Q96S86 360 aa14.12□□□□□ -0.15
VMP1-210ENST00000589823 BRD9Q9H8M2 597 aa14.12□□□□□ -0.15
VMP1-210ENST00000589823 USP18Q9UMW8 372 aa14.12□□□□□ -0.15
VMP1-210ENST00000589823 PAGE1O75459 146 aa14.11□□□□□ -0.15
VMP1-210ENST00000589823 NFATC1O95644 943 aa14.11□□□□□ -0.15
VMP1-210ENST00000589823 TDGQ13569 410 aa14.11□□□□□ -0.15
VMP1-210ENST00000589823 HS1BP3Q53T59 392 aa14.11□□□□□ -0.15
VMP1-210ENST00000589823 ERMARDQ5T6L9 678 aa14.11□□□□□ -0.15
VMP1-210ENST00000589823 DAB2IPQ5VWQ8 1189 aa14.11□□□□□ -0.15
VMP1-210ENST00000589823 RAP1GAP2Q684P5 730 aa14.11□□□□□ -0.15
VMP1-210ENST00000589823 CPXM2Q8N436 756 aa14.11□□□□□ -0.15
VMP1-210ENST00000589823 CCDC185Q8N715 623 aa14.11□□□□□ -0.15
VMP1-210ENST00000589823 KIAA1524Q8TCG1 905 aa14.11□□□□□ -0.15
VMP1-210ENST00000589823 IRF7Q92985 503 aa14.11□□□□□ -0.15
VMP1-210ENST00000589823 ZFYVE19Q96K21 471 aa14.11□□□□□ -0.15
VMP1-210ENST00000589823 SIK2Q9H0K1 926 aa14.11□□□□□ -0.15
VMP1-210ENST00000589823 LINC00597Q9H2U6 94 aa14.11□□□□□ -0.15
VMP1-210ENST00000589823 ZWILCHQ9H900 591 aa14.11□□□□□ -0.15
VMP1-210ENST00000589823 TRMT1Q9NXH9 659 aaKnown RBP14.11□□□□□ -0.15
VMP1-210ENST00000589823 XPO7Q9UIA9 1087 aaKnown RBP14.11□□□□□ -0.15
VMP1-210ENST00000589823 STOML2Q9UJZ1 356 aa14.11□□□□□ -0.15
VMP1-210ENST00000589823 FZD10Q9ULW2 581 aa14.11□□□□□ -0.15
VMP1-210ENST00000589823 ALG6Q9Y672 507 aa14.11□□□□□ -0.15
VMP1-210ENST00000589823 GOLGA6L7A0A1B0GV03 622 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 TYW5A2RUC4 315 aaKnown RBP14.1□□□□□ -0.15
VMP1-210ENST00000589823 GRID2IPA4D2P6 1211 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 GOLGA6L9A6NEM1 432 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 F5H5T6 163 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 PALMO75781 387 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 CYBBP04839 570 aa14.1□□□□□ -0.15
VMP1-210ENST00000589823 KRT7P08729 469 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms