RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 SFMBT1Q9UHJ3 866 aa10.08□□□□□ -0.8
APOC1-204ENST00000589078 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.08□□□□□ -0.8
APOC1-204ENST00000589078 PKD1L2Q7Z442 2459 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 LRRC53A6NM62 1247 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 TRDMT1O14717 391 aaKnown RBP10.07□□□□□ -0.8
APOC1-204ENST00000589078 HOXC11O43248 304 aaPredicted RBP10.07□□□□□ -0.8
APOC1-204ENST00000589078 APOEP02649 317 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 ERBB2P04626 1255 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 CALB1P05937 261 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 SLC2A3P11169 496 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 HOXB3P14651 431 aaPredicted RBP10.07□□□□□ -0.8
APOC1-204ENST00000589078 EIF2DP41214 584 aaKnown RBP10.07□□□□□ -0.8
APOC1-204ENST00000589078 CCR3P51677 355 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 TBX4P57082 545 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 NOMO3P69849 1222 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 SHC2P98077 582 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 FMO1Q01740 532 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 RING1Q06587 406 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 SRSF5Q13243 272 aaKnown RBP10.07□□□□□ -0.8
APOC1-204ENST00000589078 TRIM14Q14142 442 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 SIM2Q14190 667 aaPredicted RBP10.07□□□□□ -0.8
APOC1-204ENST00000589078 PON2Q15165 354 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 FBXO43Q4G163 708 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 DCAF6Q58WW2 860 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 FAM102AQ5T9C2 384 aaPredicted RBP10.07□□□□□ -0.8
APOC1-204ENST00000589078 N4BP2L1Q5TBK1 243 aaPredicted RBP10.07□□□□□ -0.8
APOC1-204ENST00000589078 IL31Q6EBC2 164 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 OLFML1Q6UWY5 402 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 Q6ZNB5 142 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 FAM183BPQ6ZVS7 135 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 SLC26A9Q7LBE3 791 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 VPS36Q86VN1 386 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 DENND1CQ8IV53 801 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 DQX1Q8TE96 717 aaKnown RBP10.07□□□□□ -0.8
APOC1-204ENST00000589078 CPA5Q8WXQ8 436 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 BAP1Q92560 729 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 CD101Q93033 1021 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 XPO6Q96QU8 1125 aaKnown RBP10.07□□□□□ -0.8
APOC1-204ENST00000589078 AGPAT1Q99943 283 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 XPO4Q9C0E2 1151 aaKnown RBP10.07□□□□□ -0.8
APOC1-204ENST00000589078 LMAN1LQ9HAT1 526 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 SPHK2Q9NRA0 654 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 AIPL1Q9NZN9 384 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 SLC12A6Q9UHW9 1150 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 STAP1Q9ULZ2 295 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 NAALADL1Q9UQQ1 740 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 TLR6Q9Y2C9 796 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 LUC7L2Q9Y383 392 aaKnown RBP10.07□□□□□ -0.8
APOC1-204ENST00000589078 PAXBP1Q9Y5B6 917 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 FASNP49327 2511 aaKnown RBP10.07□□□□□ -0.8
APOC1-204ENST00000589078 ITIH6Q6UXX5 1313 aa10.07□□□□□ -0.8
APOC1-204ENST00000589078 NUP210Q8TEM1 1887 aaPredicted RBP10.06□□□□□ -0.8
APOC1-204ENST00000589078 DMXL2Q8TDJ6 3036 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 TYW5A2RUC4 315 aaKnown RBP10.06□□□□□ -0.8
APOC1-204ENST00000589078 OTOL1A6NHN0 477 aaPredicted RBP10.06□□□□□ -0.8
APOC1-204ENST00000589078 MSI1O43347 362 aaKnown RBP10.06□□□□□ -0.8
APOC1-204ENST00000589078 HRO43593 1189 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 GREM1O60565 184 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 ATG13O75143 517 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 DAB1O75553 588 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 CYP1A1P04798 512 aaPredicted RBP10.06□□□□□ -0.8
APOC1-204ENST00000589078 CHRNB2P17787 502 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 TNFAIP3P21580 790 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 MMP8P22894 467 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 NOS2P35228 1153 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 PBX1P40424 430 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 GABRB2P47870 512 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 ZBED6P86452 979 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 SATB1Q01826 763 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 KLHL30Q0D2K2 578 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 CLEC16AQ2KHT3 1053 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 TSR1Q2NL82 804 aaKnown RBP10.06□□□□□ -0.8
APOC1-204ENST00000589078 TMEM196Q5HYL7 178 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 SPECC1LQ69YQ0 1117 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 RHBDF2Q6PJF5 856 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 TXNDC11Q6PKC3 985 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 MAMSTRQ6ZN01 415 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 MMS22LQ6ZRQ5 1243 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 TPGS1Q6ZTW0 290 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 SND1Q7KZF4 910 aaKnown RBP eCLIP10.06□□□□□ -0.84e-31■■□□□ 14.1
APOC1-204ENST00000589078 TAC4Q86UU9 113 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 CPXM2Q8N436 756 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 SYN2Q92777 582 aaPredicted RBP10.06□□□□□ -0.8
APOC1-204ENST00000589078 RNF34Q969K3 372 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 SLC2A13Q96QE2 648 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 PNKPQ96T60 521 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 BBS2Q9BXC9 721 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 IRX2Q9BZI1 471 aaPredicted RBP10.06□□□□□ -0.8
APOC1-204ENST00000589078 TTYH3Q9C0H2 523 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.06□□□□□ -0.8
APOC1-204ENST00000589078 ADAM22Q9P0K1 906 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 MARK1Q9P0L2 795 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 DEC1Q9P2X7 70 aa10.06□□□□□ -0.8
APOC1-204ENST00000589078 AGO1Q9UL18 857 aaKnown RBP10.06□□□□□ -0.8
APOC1-204ENST00000589078 BZW2Q9Y6E2 419 aaKnown RBP10.06□□□□□ -0.8
APOC1-204ENST00000589078 ANKRD62A6NC57 917 aa10.05□□□□□ -0.8
APOC1-204ENST00000589078 CHURC1-FNTBB4DL54 471 aa10.05□□□□□ -0.8
APOC1-204ENST00000589078 NEDD8-MDP1E9PL57 170 aa10.05□□□□□ -0.8
APOC1-204ENST00000589078 GOLGA8SH3BPF8 625 aa10.05□□□□□ -0.8
APOC1-204ENST00000589078 IRAK2O43187 625 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms