RNA–Protein interactions for RNA: ENST00000588738.5

ERCC1-207, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-207ENST00000588738 CLEC16AQ2KHT3 1053 aa19.54■□□□□ 0.72
ERCC1-207ENST00000588738 C2orf27AQ580R0 203 aa19.54■□□□□ 0.72
ERCC1-207ENST00000588738 ZC3H12AQ5D1E8 599 aaKnown RBP19.54■□□□□ 0.72
ERCC1-207ENST00000588738 SFMBT2Q5VUG0 894 aa19.54■□□□□ 0.72
ERCC1-207ENST00000588738 PKN3Q6P5Z2 889 aa19.54■□□□□ 0.72
ERCC1-207ENST00000588738 TSSK4Q6SA08 328 aa19.54■□□□□ 0.72
ERCC1-207ENST00000588738 MMS22LQ6ZRQ5 1243 aa19.54■□□□□ 0.72
ERCC1-207ENST00000588738 TERB1Q8NA31 727 aa19.54■□□□□ 0.72
ERCC1-207ENST00000588738 SLC30A5Q8TAD4 765 aa19.54■□□□□ 0.72
ERCC1-207ENST00000588738 USP33Q8TEY7 942 aa19.54■□□□□ 0.72
ERCC1-207ENST00000588738 RNF34Q969K3 372 aa19.54■□□□□ 0.72
ERCC1-207ENST00000588738 ACDQ96AP0 544 aa19.54■□□□□ 0.72
ERCC1-207ENST00000588738 TMA16Q96EY4 203 aaKnown RBP19.54■□□□□ 0.72
ERCC1-207ENST00000588738 IRX2Q9BZI1 471 aaPredicted RBP19.54■□□□□ 0.72
ERCC1-207ENST00000588738 TTYH3Q9C0H2 523 aa19.54■□□□□ 0.72
ERCC1-207ENST00000588738 DDIT4Q9NX09 232 aa19.54■□□□□ 0.72
ERCC1-207ENST00000588738 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.54■□□□□ 0.72
ERCC1-207ENST00000588738 AIPL1Q9NZN9 384 aa19.54■□□□□ 0.72
ERCC1-207ENST00000588738 SLC12A6Q9UHW9 1150 aa19.54■□□□□ 0.72
ERCC1-207ENST00000588738 FBXO10Q9UK96 956 aa19.54■□□□□ 0.72
ERCC1-207ENST00000588738 CACNA1HO95180 2353 aa19.54■□□□□ 0.72
ERCC1-207ENST00000588738 GOLGA8SH3BPF8 625 aa19.53■□□□□ 0.72
ERCC1-207ENST00000588738 TRIM24O15164 1050 aa19.53■□□□□ 0.72
ERCC1-207ENST00000588738 TSPAN3O60637 253 aa19.53■□□□□ 0.72
ERCC1-207ENST00000588738 MOCS2O96007 188 aaPredicted RBP19.53■□□□□ 0.72
ERCC1-207ENST00000588738 CCR1P32246 355 aa19.53■□□□□ 0.72
ERCC1-207ENST00000588738 CENPCQ03188 943 aa19.53■□□□□ 0.72
ERCC1-207ENST00000588738 EIF4EBP2Q13542 120 aaPredicted RBP19.53■□□□□ 0.72
ERCC1-207ENST00000588738 ZC3H14Q6PJT7 736 aaKnown RBP19.53■□□□□ 0.72
ERCC1-207ENST00000588738 SFTPA1Q8IWL2 248 aa19.53■□□□□ 0.72
ERCC1-207ENST00000588738 ATP6V0D2Q8N8Y2 350 aa19.53■□□□□ 0.72
ERCC1-207ENST00000588738 RNF214Q8ND24 703 aa19.53■□□□□ 0.72
ERCC1-207ENST00000588738 IQCDQ96DY2 449 aa19.53■□□□□ 0.72
ERCC1-207ENST00000588738 BTN2A3PQ96KV6 586 aa19.53■□□□□ 0.72
ERCC1-207ENST00000588738 SLC2A11Q9BYW1 496 aa19.53■□□□□ 0.72
ERCC1-207ENST00000588738 STAP1Q9ULZ2 295 aa19.53■□□□□ 0.72
ERCC1-207ENST00000588738 SLC8A2Q9UPR5 921 aa19.53■□□□□ 0.72
ERCC1-207ENST00000588738 SYNJ2BP-COX16A0A087WUM0 186 aa19.52■□□□□ 0.72
ERCC1-207ENST00000588738 GOLGA6L7A0A1B0GV03 622 aa19.52■□□□□ 0.72
ERCC1-207ENST00000588738 A0A1W2PQJ5 194 aa19.52■□□□□ 0.72
ERCC1-207ENST00000588738 M0QYT0 321 aa19.52■□□□□ 0.72
ERCC1-207ENST00000588738 CBFA2T2O43439 604 aa19.52■□□□□ 0.72
ERCC1-207ENST00000588738 CISD3P0C7P0 127 aa19.52■□□□□ 0.72
ERCC1-207ENST00000588738 ABCB4P21439 1286 aa19.52■□□□□ 0.72
ERCC1-207ENST00000588738 TNFAIP3P21580 790 aa19.52■□□□□ 0.72
ERCC1-207ENST00000588738 NBL1P41271 181 aa19.52■□□□□ 0.72
ERCC1-207ENST00000588738 NME3Q13232 169 aa19.52■□□□□ 0.72
ERCC1-207ENST00000588738 FAM133BQ5BKY9 247 aaKnown RBP19.52■□□□□ 0.72
ERCC1-207ENST00000588738 C10orf76Q5T2E6 689 aa19.52■□□□□ 0.72
ERCC1-207ENST00000588738 RFWD3Q6PCD5 774 aa19.52■□□□□ 0.72
ERCC1-207ENST00000588738 SYT13Q7L8C5 426 aa19.52■□□□□ 0.72
ERCC1-207ENST00000588738 ARCQ7LC44 396 aa19.52■□□□□ 0.72
ERCC1-207ENST00000588738 PHF13Q86YI8 300 aaPredicted RBP19.52■□□□□ 0.72
ERCC1-207ENST00000588738 KCNV2Q8TDN2 545 aa19.52■□□□□ 0.72
ERCC1-207ENST00000588738 P2RY11Q96G91 374 aa19.52■□□□□ 0.72
ERCC1-207ENST00000588738 NPY6RQ99463 290 aa19.52■□□□□ 0.72
ERCC1-207ENST00000588738 C11orf70Q9BRQ4 267 aa19.52■□□□□ 0.72
ERCC1-207ENST00000588738 XPO4Q9C0E2 1151 aaKnown RBP19.52■□□□□ 0.72
ERCC1-207ENST00000588738 NUCKS1Q9H1E3 243 aaKnown RBP19.52■□□□□ 0.72
ERCC1-207ENST00000588738 TMEM51Q9NW97 253 aa19.52■□□□□ 0.72
ERCC1-207ENST00000588738 C2orf42Q9NWW7 574 aa19.52■□□□□ 0.72
ERCC1-207ENST00000588738 ZSCAN32Q9NX65 697 aa19.52■□□□□ 0.72
ERCC1-207ENST00000588738 ADAM22Q9P0K1 906 aa19.52■□□□□ 0.72
ERCC1-207ENST00000588738 COX16Q9P0S2 106 aa19.52■□□□□ 0.72
ERCC1-207ENST00000588738 SLC27A6Q9Y2P4 619 aa19.52■□□□□ 0.72
ERCC1-207ENST00000588738 FANCMQ8IYD8 2048 aa19.52■□□□□ 0.72
ERCC1-207ENST00000588738 GFRA2O00451 464 aa19.51■□□□□ 0.71
ERCC1-207ENST00000588738 F9P00740 461 aa19.51■□□□□ 0.71
ERCC1-207ENST00000588738 CALB1P05937 261 aa19.51■□□□□ 0.71
ERCC1-207ENST00000588738 TDGF1P13385 188 aa19.51■□□□□ 0.71
ERCC1-207ENST00000588738 TIE1P35590 1138 aa19.51■□□□□ 0.71
ERCC1-207ENST00000588738 KIR2DL1P43626 348 aaPredicted RBP19.51■□□□□ 0.71
ERCC1-207ENST00000588738 MTA1Q13330 715 aa19.51■□□□□ 0.71
ERCC1-207ENST00000588738 SLC25A52Q3SY17 297 aa19.51■□□□□ 0.71
ERCC1-207ENST00000588738 HSF5Q4G112 596 aaPredicted RBP19.51■□□□□ 0.71
ERCC1-207ENST00000588738 MPP7Q5T2T1 576 aa19.51■□□□□ 0.71
ERCC1-207ENST00000588738 EMC10Q5UCC4 262 aa19.51■□□□□ 0.71
ERCC1-207ENST00000588738 PIK3R6Q5UE93 754 aa19.51■□□□□ 0.71
ERCC1-207ENST00000588738 NADSYN1Q6IA69 706 aa19.51■□□□□ 0.71
ERCC1-207ENST00000588738 SND1Q7KZF4 910 aaKnown RBP eCLIP19.51■□□□□ 0.71
ERCC1-207ENST00000588738 ATRIPQ8WXE1 791 aa19.51■□□□□ 0.71
ERCC1-207ENST00000588738 NELL1Q92832 810 aa19.51■□□□□ 0.71
ERCC1-207ENST00000588738 NT5C3BQ969T7 300 aa19.51■□□□□ 0.71
ERCC1-207ENST00000588738 TMEM59LQ9UK28 342 aa19.51■□□□□ 0.71
ERCC1-207ENST00000588738 STARD13Q9Y3M8 1113 aa19.51■□□□□ 0.71
ERCC1-207ENST00000588738 PCDHGA2Q9Y5H1 932 aa19.51■□□□□ 0.71
ERCC1-207ENST00000588738 TYW5A2RUC4 315 aaKnown RBP19.5■□□□□ 0.71
ERCC1-207ENST00000588738 KCNU1A8MYU2 1149 aa19.5■□□□□ 0.71
ERCC1-207ENST00000588738 K7ESF4 209 aa19.5■□□□□ 0.71
ERCC1-207ENST00000588738 HOXD9P28356 352 aaPredicted RBP19.5■□□□□ 0.71
ERCC1-207ENST00000588738 HOXA6P31267 233 aa19.5■□□□□ 0.71
ERCC1-207ENST00000588738 SLC6A4P31645 630 aa19.5■□□□□ 0.71
ERCC1-207ENST00000588738 PRKCIP41743 596 aa19.5■□□□□ 0.71
ERCC1-207ENST00000588738 SULT1E1P49888 294 aa19.5■□□□□ 0.71
ERCC1-207ENST00000588738 KLHL30Q0D2K2 578 aa19.5■□□□□ 0.71
ERCC1-207ENST00000588738 DMC1Q14565 340 aa19.5■□□□□ 0.71
ERCC1-207ENST00000588738 PPP1R2P3Q6NXS1 205 aa19.5■□□□□ 0.71
ERCC1-207ENST00000588738 CCDC33Q8N5R6 958 aa19.5■□□□□ 0.71
ERCC1-207ENST00000588738 CAMKK1Q8N5S9 505 aa19.5■□□□□ 0.71
ERCC1-207ENST00000588738 IL17RCQ8NAC3 791 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms