RNA–Protein interactions for RNA: ENST00000588278.1

TPGS1-202, Transcript of tubulin polyglutamylase complex subunit 1, humanhuman

Gene TPGS1, Length 2,873 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS1-202ENST00000588278 NPNTQ6UXI9 565 aa16.07■□□□□ 0.16
TPGS1-202ENST00000588278 KYAT3Q6YP21 454 aaKnown RBP16.07■□□□□ 0.16
TPGS1-202ENST00000588278 FRMD7Q6ZUT3 714 aa16.07■□□□□ 0.16
TPGS1-202ENST00000588278 BRSK2Q8IWQ3 736 aa16.07■□□□□ 0.16
TPGS1-202ENST00000588278 ZBTB8OSQ8IWT0 167 aa16.07■□□□□ 0.16
TPGS1-202ENST00000588278 CPNE9Q8IYJ1 553 aa16.07■□□□□ 0.16
TPGS1-202ENST00000588278 WDTC1Q8N5D0 677 aa16.07■□□□□ 0.16
TPGS1-202ENST00000588278 TUT1Q9H6E5 874 aaKnown RBP16.07■□□□□ 0.16
TPGS1-202ENST00000588278 ELP3Q9H9T3 547 aa16.07■□□□□ 0.16
TPGS1-202ENST00000588278 IFT122Q9HBG6 1241 aa16.07■□□□□ 0.16
TPGS1-202ENST00000588278 ACSS2Q9NR19 701 aa16.07■□□□□ 0.16
TPGS1-202ENST00000588278 MSCO60682 206 aa16.06■□□□□ 0.16
TPGS1-202ENST00000588278 CRTAMO95727 393 aa16.06■□□□□ 0.16
TPGS1-202ENST00000588278 COPAP53621 1224 aa16.06■□□□□ 0.16
TPGS1-202ENST00000588278 SLC18A2Q05940 514 aa16.06■□□□□ 0.16
TPGS1-202ENST00000588278 UBA3Q8TBC4 463 aa16.06■□□□□ 0.16
TPGS1-202ENST00000588278 RBM38Q9H0Z9 239 aaKnown RBP16.06■□□□□ 0.16
TPGS1-202ENST00000588278 HMGXB4Q9UGU5 601 aa16.06■□□□□ 0.16
TPGS1-202ENST00000588278 PLLPQ9Y342 182 aa16.06■□□□□ 0.16
TPGS1-202ENST00000588278 GMEB1Q9Y692 573 aa16.06■□□□□ 0.16
TPGS1-202ENST00000588278 MAD1L1Q9Y6D9 718 aa16.06■□□□□ 0.16
TPGS1-202ENST00000588278 STYXL1Q9Y6J8 313 aa16.06■□□□□ 0.16
TPGS1-202ENST00000588278 SDR42E2A6NKP2 422 aa16.06■□□□□ 0.16
TPGS1-202ENST00000588278 XPO1O14980 1071 aaKnown RBP16.06■□□□□ 0.16
TPGS1-202ENST00000588278 CALB1P05937 261 aa16.06■□□□□ 0.16
TPGS1-202ENST00000588278 SERPINA6P08185 405 aa16.06■□□□□ 0.16
TPGS1-202ENST00000588278 MRPS22P82650 360 aaKnown RBP16.06■□□□□ 0.16
TPGS1-202ENST00000588278 PPIDQ08752 370 aaKnown RBP16.06■□□□□ 0.16
TPGS1-202ENST00000588278 PTPN20Q4JDL3 420 aa16.06■□□□□ 0.16
TPGS1-202ENST00000588278 ZNF554Q86TJ5 538 aa16.06■□□□□ 0.16
TPGS1-202ENST00000588278 NDUFAF2Q8N183 169 aa16.06■□□□□ 0.16
TPGS1-202ENST00000588278 ZNF512Q96ME7 567 aaPredicted RBP16.06■□□□□ 0.16
TPGS1-202ENST00000588278 SPATA33Q96N06 139 aa16.06■□□□□ 0.16
TPGS1-202ENST00000588278 VPS33BQ9H267 617 aa16.06■□□□□ 0.16
TPGS1-202ENST00000588278 SMYD2Q9NRG4 433 aa16.06■□□□□ 0.16
TPGS1-202ENST00000588278 DNAJB4Q9UDY4 337 aa16.06■□□□□ 0.16
TPGS1-202ENST00000588278 AP4B1Q9Y6B7 739 aa16.06■□□□□ 0.16
TPGS1-202ENST00000588278 ADGRA2Q96PE1 1338 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 F5H423 210 aaPredicted RBP16.05■□□□□ 0.16
TPGS1-202ENST00000588278 ITGAVP06756 1048 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 RPL10P27635 214 aaKnown RBP16.05■□□□□ 0.16
TPGS1-202ENST00000588278 DCTN2Q13561 401 aaKnown RBP16.05■□□□□ 0.16
TPGS1-202ENST00000588278 ANKDD1AQ495B1 522 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 CCDC33Q8N5R6 958 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 TTC13Q8NBP0 860 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 ACO2Q99798 780 aaKnown RBP16.05■□□□□ 0.16
TPGS1-202ENST00000588278 MINDY3Q9H8M7 445 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 XAB2Q9HCS7 855 aaKnown RBP16.05■□□□□ 0.16
TPGS1-202ENST00000588278 PNPOQ9NVS9 261 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 ADAMTS5Q9UNA0 930 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 SF3B1O75533 1304 aaKnown RBP eCLIP16.05■□□□□ 0.16
TPGS1-202ENST00000588278 OGTO15294 1046 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 SIN3BO75182 1162 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 TNNC2P02585 160 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 IL1R2P27930 398 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 CDKL1Q00532 357 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 AAGABQ6PD74 315 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 RFX6Q8HWS3 928 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 SLC35B2Q8TB61 432 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 C7orf26Q96N11 449 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 TSPYL2Q9H2G4 693 aaPredicted RBP16.05■□□□□ 0.16
TPGS1-202ENST00000588278 CYTH4Q9UIA0 394 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 COL11A1P12107 1806 aaPredicted RBP16.05■□□□□ 0.16
TPGS1-202ENST00000588278 RGPD3A6NKT7 1758 aaPredicted RBP16.05■□□□□ 0.16
TPGS1-202ENST00000588278 RGPD4Q7Z3J3 1758 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 TMX2-CTNND1H3BSU7 103 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 TRMUO75648 421 aaKnown RBP16.05■□□□□ 0.16
TPGS1-202ENST00000588278 STX3Q13277 289 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 RAB6CQ53S08 254 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 SH3PXD2AQ5TCZ1 1133 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 WDR49Q8IV35 697 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 KCTD6Q8NC69 237 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 CPB2Q96IY4 423 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 VCPIP1Q96JH7 1222 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 SPATC1LQ9H0A9 340 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 RAB6CQ9H0N0 254 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 COPS7BQ9H9Q2 264 aaPredicted RBP16.05■□□□□ 0.16
TPGS1-202ENST00000588278 INIPQ9NRY2 104 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 ZNF112Q9UJU3 913 aa16.05■□□□□ 0.16
TPGS1-202ENST00000588278 FER1L6Q2WGJ9 1857 aa16.04■□□□□ 0.16
TPGS1-202ENST00000588278 ADM5C9JUS6 153 aa16.04■□□□□ 0.16
TPGS1-202ENST00000588278 DCXO43602 365 aa16.04■□□□□ 0.16
TPGS1-202ENST00000588278 ITGBL1O95965 494 aaPredicted RBP16.04■□□□□ 0.16
TPGS1-202ENST00000588278 ITGB3P05106 788 aa16.04■□□□□ 0.16
TPGS1-202ENST00000588278 F7P08709 466 aaPredicted RBP16.04■□□□□ 0.16
TPGS1-202ENST00000588278 PDGFRBP09619 1106 aa16.04■□□□□ 0.16
TPGS1-202ENST00000588278 ITGAXP20702 1163 aa16.04■□□□□ 0.16
TPGS1-202ENST00000588278 ATF7IP2Q5U623 682 aa16.04■□□□□ 0.16
TPGS1-202ENST00000588278 FAM91A1Q658Y4 838 aa16.04■□□□□ 0.16
TPGS1-202ENST00000588278 EFCAB12Q6NXP0 572 aa16.04■□□□□ 0.16
TPGS1-202ENST00000588278 SCYL2Q6P3W7 929 aa16.04■□□□□ 0.16
TPGS1-202ENST00000588278 TRMT10BQ6PF06 316 aaKnown RBP16.04■□□□□ 0.16
TPGS1-202ENST00000588278 MAVSQ7Z434 540 aa16.04■□□□□ 0.16
TPGS1-202ENST00000588278 PTAR1Q7Z6K3 402 aaPredicted RBP16.04■□□□□ 0.16
TPGS1-202ENST00000588278 APOBEC3FQ8IUX4 373 aaKnown RBP16.04■□□□□ 0.16
TPGS1-202ENST00000588278 KIAA0319LQ8IZA0 1049 aa16.04■□□□□ 0.16
TPGS1-202ENST00000588278 UNC5BQ8IZJ1 945 aa16.04■□□□□ 0.16
TPGS1-202ENST00000588278 TFB1MQ8WVM0 346 aaKnown RBP16.04■□□□□ 0.16
TPGS1-202ENST00000588278 NKD2Q969F2 451 aaPredicted RBP16.04■□□□□ 0.16
TPGS1-202ENST00000588278 MOCOSQ96EN8 888 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms