RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 FAM78AQ5JUQ0 283 aa18.99■□□□□ 0.63
H3F3B-206ENST00000587560 BRMS1LQ5PSV4 323 aa18.99■□□□□ 0.63
H3F3B-206ENST00000587560 MIB1Q86YT6 1006 aa18.99■□□□□ 0.63
H3F3B-206ENST00000587560 KIAA1958Q8N8K9 716 aa18.99■□□□□ 0.63
H3F3B-206ENST00000587560 ZSCAN18Q8TBC5 510 aaPredicted RBP18.99■□□□□ 0.63
H3F3B-206ENST00000587560 UBE2Q2Q8WVN8 375 aa18.99■□□□□ 0.63
H3F3B-206ENST00000587560 AZIN2Q96A70 460 aa18.99■□□□□ 0.63
H3F3B-206ENST00000587560 RSPRY1Q96DX4 576 aa18.99■□□□□ 0.63
H3F3B-206ENST00000587560 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.99■□□□□ 0.63
H3F3B-206ENST00000587560 EPS15L1Q9UBC2 864 aa18.99■□□□□ 0.63
H3F3B-206ENST00000587560 STOML2Q9UJZ1 356 aa18.99■□□□□ 0.63
H3F3B-206ENST00000587560 CCL26Q9Y258 94 aa18.99■□□□□ 0.63
H3F3B-206ENST00000587560 USTQ9Y2C2 406 aa18.99■□□□□ 0.63
H3F3B-206ENST00000587560 KMT2BQ9UMN6 2715 aaPredicted RBP18.99■□□□□ 0.63
H3F3B-206ENST00000587560 TRIOO75962 3097 aa18.98■□□□□ 0.63
H3F3B-206ENST00000587560 BAHCC1Q9P281 2608 aa18.98■□□□□ 0.63
H3F3B-206ENST00000587560 RNF8O76064 485 aa18.98■□□□□ 0.63
H3F3B-206ENST00000587560 CKMP06732 381 aa18.98■□□□□ 0.63
H3F3B-206ENST00000587560 LAMP2P13473 410 aa18.98■□□□□ 0.63
H3F3B-206ENST00000587560 AIF1P55008 147 aa18.98■□□□□ 0.63
H3F3B-206ENST00000587560 NME3Q13232 169 aa18.98■□□□□ 0.63
H3F3B-206ENST00000587560 SMAD2Q15796 467 aaKnown RBP18.98■□□□□ 0.63
H3F3B-206ENST00000587560 ZNF77Q15935 545 aa18.98■□□□□ 0.63
H3F3B-206ENST00000587560 ZC3H12AQ5D1E8 599 aaKnown RBP18.98■□□□□ 0.63
H3F3B-206ENST00000587560 LRRC38Q5VT99 294 aa18.98■□□□□ 0.63
H3F3B-206ENST00000587560 TXNRD3NBQ6F5E7 133 aa18.98■□□□□ 0.63
H3F3B-206ENST00000587560 NYAP1Q6ZVC0 841 aa18.98■□□□□ 0.63
H3F3B-206ENST00000587560 DAAM2Q86T65 1068 aa18.98■□□□□ 0.63
H3F3B-206ENST00000587560 ZSCAN30Q86W11 494 aa18.98■□□□□ 0.63
H3F3B-206ENST00000587560 FAM131BQ86XD5 332 aa18.98■□□□□ 0.63
H3F3B-206ENST00000587560 SYCE1Q8N0S2 351 aa18.98■□□□□ 0.63
H3F3B-206ENST00000587560 CCDC185Q8N715 623 aa18.98■□□□□ 0.63
H3F3B-206ENST00000587560 TRIM58Q8NG06 486 aa18.98■□□□□ 0.63
H3F3B-206ENST00000587560 FAM71BQ8TC56 605 aa18.98■□□□□ 0.63
H3F3B-206ENST00000587560 SMARCD2Q92925 531 aa18.98■□□□□ 0.63
H3F3B-206ENST00000587560 LRRC3BQ96PB8 259 aa18.98■□□□□ 0.63
H3F3B-206ENST00000587560 SMG9Q9H0W8 520 aaKnown RBP18.98■□□□□ 0.63
H3F3B-206ENST00000587560 TDP1Q9NUW8 608 aa18.98■□□□□ 0.63
H3F3B-206ENST00000587560 OBP2AQ9NY56 170 aa18.98■□□□□ 0.63
H3F3B-206ENST00000587560 USP18Q9UMW8 372 aa18.98■□□□□ 0.63
H3F3B-206ENST00000587560 HYOU1Q9Y4L1 999 aa18.98■□□□□ 0.63
H3F3B-206ENST00000587560 ZFHX4Q86UP3 3567 aa18.98■□□□□ 0.63
H3F3B-206ENST00000587560 TMEM110-MUSTN1A8MSY1 372 aa18.97■□□□□ 0.63
H3F3B-206ENST00000587560 LEFTY2O00292 366 aa18.97■□□□□ 0.63
H3F3B-206ENST00000587560 GFRA2O00451 464 aa18.97■□□□□ 0.63
H3F3B-206ENST00000587560 CTNNA2P26232 953 aa18.97■□□□□ 0.63
H3F3B-206ENST00000587560 CCR1P32246 355 aa18.97■□□□□ 0.63
H3F3B-206ENST00000587560 ADRA1BP35368 520 aa18.97■□□□□ 0.63
H3F3B-206ENST00000587560 AVPR1AP37288 418 aa18.97■□□□□ 0.63
H3F3B-206ENST00000587560 HTR3DQ70Z44 454 aa18.97■□□□□ 0.63
H3F3B-206ENST00000587560 POLNQ7Z5Q5 900 aa18.97■□□□□ 0.63
H3F3B-206ENST00000587560 FAM217AQ8IXS0 508 aa18.97■□□□□ 0.63
H3F3B-206ENST00000587560 TEKT4Q8WW24 435 aa18.97■□□□□ 0.63
H3F3B-206ENST00000587560 KIF9Q9HAQ2 790 aa18.97■□□□□ 0.63
H3F3B-206ENST00000587560 SMPD4Q9NXE4 827 aa18.97■□□□□ 0.63
H3F3B-206ENST00000587560 FZD10Q9ULW2 581 aa18.97■□□□□ 0.63
H3F3B-206ENST00000587560 DOCK4Q8N1I0 1966 aa18.97■□□□□ 0.63
H3F3B-206ENST00000587560 ANHXE9PGG2 379 aa18.96■□□□□ 0.63
H3F3B-206ENST00000587560 FANCGO15287 622 aa18.96■□□□□ 0.63
H3F3B-206ENST00000587560 LATS1O95835 1130 aa18.96■□□□□ 0.63
H3F3B-206ENST00000587560 SLC2A3P11169 496 aa18.96■□□□□ 0.63
H3F3B-206ENST00000587560 PEX5P50542 639 aa18.96■□□□□ 0.63
H3F3B-206ENST00000587560 ARSEP51690 589 aa18.96■□□□□ 0.63
H3F3B-206ENST00000587560 NAP1L1P55209 391 aaKnown RBP18.96■□□□□ 0.63
H3F3B-206ENST00000587560 SEMA3BQ13214 749 aa18.96■□□□□ 0.63
H3F3B-206ENST00000587560 PUS10Q3MIT2 529 aaKnown RBP18.96■□□□□ 0.63
H3F3B-206ENST00000587560 MEI1Q5TIA1 1274 aa18.96■□□□□ 0.63
H3F3B-206ENST00000587560 NUGGCQ68CJ6 796 aa18.96■□□□□ 0.63
H3F3B-206ENST00000587560 DDX42Q86XP3 938 aaKnown RBP eCLIP18.96■□□□□ 0.63
H3F3B-206ENST00000587560 PSTKQ8IV42 348 aaKnown RBP18.96■□□□□ 0.63
H3F3B-206ENST00000587560 ZNF683Q8IZ20 524 aa18.96■□□□□ 0.63
H3F3B-206ENST00000587560 SH3RF2Q8TEC5 729 aa18.96■□□□□ 0.63
H3F3B-206ENST00000587560 HES6Q96HZ4 224 aa18.96■□□□□ 0.63
H3F3B-206ENST00000587560 HAPLN3Q96S86 360 aa18.96■□□□□ 0.63
H3F3B-206ENST00000587560 PRMT1Q99873 361 aaKnown RBP18.96■□□□□ 0.63
H3F3B-206ENST00000587560 NACA2Q9H009 215 aa18.96■□□□□ 0.63
H3F3B-206ENST00000587560 SLITRK6Q9H5Y7 841 aa18.96■□□□□ 0.63
H3F3B-206ENST00000587560 WDCPQ9H6R7 721 aa18.96■□□□□ 0.63
H3F3B-206ENST00000587560 TMPRSS4Q9NRS4 437 aa18.96■□□□□ 0.63
H3F3B-206ENST00000587560 XPO7Q9UIA9 1087 aaKnown RBP18.96■□□□□ 0.63
H3F3B-206ENST00000587560 SYNJ2BP-COX16A0A087WUM0 186 aa18.95■□□□□ 0.62
H3F3B-206ENST00000587560 E2F8A0AVK6 867 aa18.95■□□□□ 0.62
H3F3B-206ENST00000587560 DDX3YO15523 660 aaKnown RBP18.95■□□□□ 0.62
H3F3B-206ENST00000587560 PSTPIP1O43586 416 aa18.95■□□□□ 0.62
H3F3B-206ENST00000587560 DESP17661 470 aa18.95■□□□□ 0.62
H3F3B-206ENST00000587560 CTNNA1P35221 906 aaKnown RBP18.95■□□□□ 0.62
H3F3B-206ENST00000587560 NRG1Q02297 640 aaPredicted RBP18.95■□□□□ 0.62
H3F3B-206ENST00000587560 MTA1Q13330 715 aa18.95■□□□□ 0.62
H3F3B-206ENST00000587560 BOLA3Q53S33 107 aa18.95■□□□□ 0.62
H3F3B-206ENST00000587560 NADSYN1Q6IA69 706 aa18.95■□□□□ 0.62
H3F3B-206ENST00000587560 SND1Q7KZF4 910 aaKnown RBP eCLIP18.95■□□□□ 0.626e-27■□□□□ 9.2
H3F3B-206ENST00000587560 OTOP3Q7RTS5 596 aa18.95■□□□□ 0.62
H3F3B-206ENST00000587560 UNC45BQ8IWX7 931 aa18.95■□□□□ 0.62
H3F3B-206ENST00000587560 CELF5Q8N6W0 485 aaKnown RBP18.95■□□□□ 0.62
H3F3B-206ENST00000587560 BTN2A3PQ96KV6 586 aa18.95■□□□□ 0.62
H3F3B-206ENST00000587560 ALS2CR12Q96Q35 445 aa18.95■□□□□ 0.62
H3F3B-206ENST00000587560 SNRNP25Q9BV90 132 aaKnown RBP18.95■□□□□ 0.62
H3F3B-206ENST00000587560 MAGEB5Q9BZ81 275 aa18.95■□□□□ 0.62
H3F3B-206ENST00000587560 TKTL2Q9H0I9 626 aa18.95■□□□□ 0.62
H3F3B-206ENST00000587560 OSBPL2Q9H1P3 480 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms