RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 NADK2Q4G0N4 442 aa16.96■□□□□ 0.31
RANBP3-209ENST00000587411 ZFP1Q6P2D0 407 aa16.96■□□□□ 0.31
RANBP3-209ENST00000587411 BORAQ6PGQ7 559 aa16.96■□□□□ 0.31
RANBP3-209ENST00000587411 ZNF534Q76KX8 674 aa16.96■□□□□ 0.31
RANBP3-209ENST00000587411 CDKL3Q8IVW4 592 aaPredicted RBP16.96■□□□□ 0.31
RANBP3-209ENST00000587411 PNPOQ9NVS9 261 aa16.96■□□□□ 0.31
RANBP3-209ENST00000587411 STK39Q9UEW8 545 aa16.96■□□□□ 0.31
RANBP3-209ENST00000587411 BCAP29Q9UHQ4 241 aa16.96■□□□□ 0.31
RANBP3-209ENST00000587411 OATP04181 439 aa16.96■□□□□ 0.31
RANBP3-209ENST00000587411 HSPA13P48723 471 aa16.96■□□□□ 0.31
RANBP3-209ENST00000587411 ABCE1P61221 599 aaKnown RBP16.96■□□□□ 0.31
RANBP3-209ENST00000587411 NAB1Q13506 487 aa16.96■□□□□ 0.31
RANBP3-209ENST00000587411 FAM102AQ5T9C2 384 aaPredicted RBP16.96■□□□□ 0.31
RANBP3-209ENST00000587411 FKBP1CQ5VVH2 108 aa16.96■□□□□ 0.31
RANBP3-209ENST00000587411 PFDN1O60925 122 aa16.95■□□□□ 0.3
RANBP3-209ENST00000587411 CYLC2Q14093 348 aaPredicted RBP16.95■□□□□ 0.3
RANBP3-209ENST00000587411 ADRM1Q16186 407 aa16.95■□□□□ 0.3
RANBP3-209ENST00000587411 USP41Q3LFD5 358 aa16.95■□□□□ 0.3
RANBP3-209ENST00000587411 METTL21CQ5VZV1 264 aa16.95■□□□□ 0.3
RANBP3-209ENST00000587411 STEAP4Q687X5 459 aa16.95■□□□□ 0.3
RANBP3-209ENST00000587411 CDKL2Q92772 493 aa16.95■□□□□ 0.3
RANBP3-209ENST00000587411 LRGUKQ96M69 825 aa16.95■□□□□ 0.3
RANBP3-209ENST00000587411 SHCBP1LQ9BZQ2 653 aa16.95■□□□□ 0.3
RANBP3-209ENST00000587411 TELO2Q9Y4R8 837 aa16.95■□□□□ 0.3
RANBP3-209ENST00000587411 HEY1Q9Y5J3 304 aa16.95■□□□□ 0.3
RANBP3-209ENST00000587411 LOC100653049A0A140TA62 436 aa16.95■□□□□ 0.3
RANBP3-209ENST00000587411 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.95■□□□□ 0.3
RANBP3-209ENST00000587411 CCDC160A6NGH7 325 aa16.95■□□□□ 0.3
RANBP3-209ENST00000587411 OGTO15294 1046 aa16.95■□□□□ 0.3
RANBP3-209ENST00000587411 KRT34O76011 436 aa16.95■□□□□ 0.3
RANBP3-209ENST00000587411 ALDH1A2O94788 518 aa16.95■□□□□ 0.3
RANBP3-209ENST00000587411 TFAMQ00059 246 aaKnown RBP16.95■□□□□ 0.3
RANBP3-209ENST00000587411 PDE1CQ14123 709 aaPredicted RBP16.95■□□□□ 0.3
RANBP3-209ENST00000587411 SLC9A4Q6AI14 798 aa16.95■□□□□ 0.3
RANBP3-209ENST00000587411 ADCY4Q8NFM4 1077 aa16.95■□□□□ 0.3
RANBP3-209ENST00000587411 UBAP1Q9NZ09 502 aa16.95■□□□□ 0.3
RANBP3-209ENST00000587411 CDY2AQ9Y6F7 541 aa16.95■□□□□ 0.3
RANBP3-209ENST00000587411 CDY1Q9Y6F8 540 aa16.95■□□□□ 0.3
RANBP3-209ENST00000587411 TPP1O14773 563 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 GCATO75600 419 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 RGS20O76081 388 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 STK10O94804 968 aaKnown RBP16.94■□□□□ 0.3
RANBP3-209ENST00000587411 FBXO21O94952 628 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 CRTAMO95727 393 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 TNNC2P02585 160 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 ALDOAP04075 364 aaKnown RBP16.94■□□□□ 0.3
RANBP3-209ENST00000587411 HDAC4P56524 1084 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 KLF10Q13118 480 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 BOLA3Q53S33 107 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 C10orf107Q8IVU9 208 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 MPP5Q8N3R9 675 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 METTL25Q8N6Q8 603 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 NSUN6Q8TEA1 469 aaKnown RBP16.94■□□□□ 0.3
RANBP3-209ENST00000587411 GFM2Q969S9 779 aaKnown RBP16.94■□□□□ 0.3
RANBP3-209ENST00000587411 PPP1R14BQ96C90 147 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 TCHPQ9BT92 498 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 MRPL4Q9BYD3 311 aaKnown RBP16.94■□□□□ 0.3
RANBP3-209ENST00000587411 PADI4Q9UM07 663 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 WDR81Q562E7 1941 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 DCXO43602 365 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 TOMM70O94826 608 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 HMGCRP04035 888 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 SRGAP2CP0DJJ0 459 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 SRGAP2BP0DMP2 458 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 RALBP11234 206 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 MX2P20592 715 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 CREB5Q02930 508 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 ADGRE1Q14246 886 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 C16orf89Q6UX73 402 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 PACS1Q6VY07 963 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 TRIM74Q86UV6 250 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 TRIM73Q86UV7 250 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 SEPT12Q8IYM1 358 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 PHTF2Q8N3S3 785 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 PQLC3Q8N755 202 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 TMEM39BQ9GZU3 492 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 XPNPEP3Q9NQH7 507 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 RNF146Q9NTX7 359 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 COPG2Q9UBF2 871 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 NXF1Q9UBU9 619 aaKnown RBP16.94■□□□□ 0.3
RANBP3-209ENST00000587411 MAFBQ9Y5Q3 323 aaPredicted RBP16.94■□□□□ 0.3
RANBP3-209ENST00000587411 AP4B1Q9Y6B7 739 aa16.94■□□□□ 0.3
RANBP3-209ENST00000587411 C2CD4BA6NLJ0 364 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 DESP17661 470 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 EFNA5P52803 228 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 NIPAL4Q0D2K0 466 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 USP4Q13107 963 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 CAPSQ13938 189 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 ZBTB33Q86T24 672 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 TRIM56Q9BRZ2 755 aaKnown RBP16.93■□□□□ 0.3
RANBP3-209ENST00000587411 BCO2Q9BYV7 579 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 ZNF302Q9NR11 478 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 CPSF3Q9UKF6 684 aaKnown RBP16.93■□□□□ 0.3
RANBP3-209ENST00000587411 MICAL2O94851 1124 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 PDGFRAP16234 1089 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 IL4RP24394 825 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 APOFQ13790 326 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 CDAN1Q8IWY9 1227 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 ZFP28Q8NHY6 868 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 RXFP2Q8WXD0 754 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms