RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 SOAT2O75908 522 aa21.2■□□□□ 0.98
ATG4D-204ENST00000586417 SPATA31D3P0C874 917 aa21.2■□□□□ 0.98
ATG4D-204ENST00000586417 MAGEA11P43364 429 aa21.2■□□□□ 0.98
ATG4D-204ENST00000586417 VPS41P49754 854 aa21.2■□□□□ 0.98
ATG4D-204ENST00000586417 DUSP4Q13115 394 aa21.2■□□□□ 0.98
ATG4D-204ENST00000586417 CALCOCO2Q13137 446 aa21.2■□□□□ 0.98
ATG4D-204ENST00000586417 NME3Q13232 169 aa21.2■□□□□ 0.98
ATG4D-204ENST00000586417 RAB33AQ14088 237 aa21.2■□□□□ 0.98
ATG4D-204ENST00000586417 ALS2CLQ60I27 953 aa21.2■□□□□ 0.98
ATG4D-204ENST00000586417 SPATA31D4Q6ZUB0 917 aa21.2■□□□□ 0.98
ATG4D-204ENST00000586417 SCN4BQ8IWT1 228 aa21.2■□□□□ 0.98
ATG4D-204ENST00000586417 PYROXD2Q8N2H3 581 aa21.2■□□□□ 0.98
ATG4D-204ENST00000586417 ZNF461Q8TAF7 563 aa21.2■□□□□ 0.98
ATG4D-204ENST00000586417 ZNF576Q9H609 170 aa21.2■□□□□ 0.98
ATG4D-204ENST00000586417 TMPRSS4Q9NRS4 437 aa21.2■□□□□ 0.98
ATG4D-204ENST00000586417 COX16Q9P0S2 106 aa21.2■□□□□ 0.98
ATG4D-204ENST00000586417 SSX2IPQ9Y2D8 614 aa21.2■□□□□ 0.98
ATG4D-204ENST00000586417 APOL1O14791 398 aa21.19■□□□□ 0.98
ATG4D-204ENST00000586417 SEC24AO95486 1093 aa21.19■□□□□ 0.98
ATG4D-204ENST00000586417 ZSCAN5DPP0CG00 497 aa21.19■□□□□ 0.98
ATG4D-204ENST00000586417 TGM2P21980 687 aa21.19■□□□□ 0.98
ATG4D-204ENST00000586417 HSD17B3P37058 310 aa21.19■□□□□ 0.98
ATG4D-204ENST00000586417 ADCY8P40145 1251 aa21.19■□□□□ 0.98
ATG4D-204ENST00000586417 EIF3EP60228 445 aaKnown RBP21.19■□□□□ 0.98
ATG4D-204ENST00000586417 DHX9Q08211 1270 aaKnown RBP21.19■□□□□ 0.98
ATG4D-204ENST00000586417 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.19■□□□□ 0.98
ATG4D-204ENST00000586417 NTAN1Q96AB6 310 aa21.19■□□□□ 0.98
ATG4D-204ENST00000586417 ZIM3Q96PE6 472 aa21.19■□□□□ 0.98
ATG4D-204ENST00000586417 CSPG4P5Q96PW8 444 aa21.19■□□□□ 0.98
ATG4D-204ENST00000586417 C10orf88Q9H8K7 445 aa21.19■□□□□ 0.98
ATG4D-204ENST00000586417 CWC15Q9P013 229 aaKnown RBP21.19■□□□□ 0.98
ATG4D-204ENST00000586417 I6L893 689 aaPredicted RBP21.18■□□□□ 0.98
ATG4D-204ENST00000586417 SOX1O00570 391 aaPredicted RBP21.18■□□□□ 0.98
ATG4D-204ENST00000586417 SYF2O95926 243 aaKnown RBP21.18■□□□□ 0.98
ATG4D-204ENST00000586417 ETS1P14921 441 aa21.18■□□□□ 0.98
ATG4D-204ENST00000586417 GGCXP38435 758 aa21.18■□□□□ 0.98
ATG4D-204ENST00000586417 GPR15P49685 360 aa21.18■□□□□ 0.98
ATG4D-204ENST00000586417 GDF10P55107 478 aa21.18■□□□□ 0.98
ATG4D-204ENST00000586417 STKLD1Q8NE28 680 aa21.18■□□□□ 0.98
ATG4D-204ENST00000586417 CCHCR1Q8TD31 782 aa21.18■□□□□ 0.98
ATG4D-204ENST00000586417 PCDH9Q9HC56 1237 aa21.18■□□□□ 0.98
ATG4D-204ENST00000586417 ANLNQ9NQW6 1124 aa21.18■□□□□ 0.98
ATG4D-204ENST00000586417 RCOR3Q9P2K3 495 aaPredicted RBP21.18■□□□□ 0.98
ATG4D-204ENST00000586417 MTRF1LQ9UGC7 380 aaKnown RBP21.18■□□□□ 0.98
ATG4D-204ENST00000586417 TRIM66O15016 1216 aa21.18■□□□□ 0.98
ATG4D-204ENST00000586417 MCF2LO15068 1137 aa21.18■□□□□ 0.98
ATG4D-204ENST00000586417 RBP3P10745 1247 aa21.18■□□□□ 0.98
ATG4D-204ENST00000586417 OAS2P29728 719 aaKnown RBP21.18■□□□□ 0.98
ATG4D-204ENST00000586417 PGFP49763 221 aa21.18■□□□□ 0.98
ATG4D-204ENST00000586417 ITGA8P53708 1063 aa21.18■□□□□ 0.98
ATG4D-204ENST00000586417 CBX1P83916 185 aa21.18■□□□□ 0.98
ATG4D-204ENST00000586417 SCAPQ12770 1279 aa21.18■□□□□ 0.98
ATG4D-204ENST00000586417 GPS2Q13227 327 aa21.18■□□□□ 0.98
ATG4D-204ENST00000586417 DDR2Q16832 855 aa21.18■□□□□ 0.98
ATG4D-204ENST00000586417 CFAP58Q5T655 872 aa21.18■□□□□ 0.98
ATG4D-204ENST00000586417 PRPF38BQ5VTL8 546 aaKnown RBP21.18■□□□□ 0.98
ATG4D-204ENST00000586417 SDHAF4Q5VUM1 108 aa21.18■□□□□ 0.98
ATG4D-204ENST00000586417 C1orf228Q6PIY5 440 aa21.18■□□□□ 0.98
ATG4D-204ENST00000586417 ADGRD2Q7Z7M1 963 aa21.18■□□□□ 0.98
ATG4D-204ENST00000586417 SCD5Q86SK9 330 aa21.18■□□□□ 0.98
ATG4D-204ENST00000586417 P3H4Q92791 437 aa21.18■□□□□ 0.98
ATG4D-204ENST00000586417 TRIM62Q9BVG3 475 aa21.18■□□□□ 0.98
ATG4D-204ENST00000586417 DDIT4Q9NX09 232 aa21.18■□□□□ 0.98
ATG4D-204ENST00000586417 AFF4Q9UHB7 1163 aaKnown RBP21.18■□□□□ 0.98
ATG4D-204ENST00000586417 MYO16Q9Y6X6 1858 aa21.17■□□□□ 0.98
ATG4D-204ENST00000586417 SGK1O00141 431 aa21.17■□□□□ 0.98
ATG4D-204ENST00000586417 PER2O15055 1255 aa21.17■□□□□ 0.98
ATG4D-204ENST00000586417 TGM5O43548 720 aa21.17■□□□□ 0.98
ATG4D-204ENST00000586417 IGLV3-25P01717 112 aa21.17■□□□□ 0.98
ATG4D-204ENST00000586417 ADRA1BP35368 520 aa21.17■□□□□ 0.98
ATG4D-204ENST00000586417 AIF1P55008 147 aa21.17■□□□□ 0.98
ATG4D-204ENST00000586417 YWHAGP61981 247 aaKnown RBP eCLIP21.17■□□□□ 0.98
ATG4D-204ENST00000586417 CREMQ03060 361 aa21.17■□□□□ 0.98
ATG4D-204ENST00000586417 SMARCB1Q12824 385 aa21.17■□□□□ 0.98
ATG4D-204ENST00000586417 TAC4Q86UU9 113 aa21.17■□□□□ 0.98
ATG4D-204ENST00000586417 SPPL2BQ8TCT7 592 aa21.17■□□□□ 0.98
ATG4D-204ENST00000586417 DQX1Q8TE96 717 aaKnown RBP21.17■□□□□ 0.98
ATG4D-204ENST00000586417 EMILIN2Q9BXX0 1053 aa21.17■□□□□ 0.98
ATG4D-204ENST00000586417 ADAM7Q9H2U9 754 aa21.17■□□□□ 0.98
ATG4D-204ENST00000586417 TTYH1Q9H313 450 aaPredicted RBP21.17■□□□□ 0.98
ATG4D-204ENST00000586417 MED4Q9NPJ6 270 aa21.17■□□□□ 0.98
ATG4D-204ENST00000586417 FBXW11Q9UKB1 542 aa21.17■□□□□ 0.98
ATG4D-204ENST00000586417 F9P00740 461 aa21.16■□□□□ 0.98
ATG4D-204ENST00000586417 ADH1AP07327 375 aa21.16■□□□□ 0.98
ATG4D-204ENST00000586417 GOT1P17174 413 aa21.16■□□□□ 0.98
ATG4D-204ENST00000586417 CXCR3P49682 368 aa21.16■□□□□ 0.98
ATG4D-204ENST00000586417 FAM193AP78312 1265 aa21.16■□□□□ 0.98
ATG4D-204ENST00000586417 CAV1Q03135 178 aa21.16■□□□□ 0.98
ATG4D-204ENST00000586417 IFRD2Q12894 506 aaPredicted RBP21.16■□□□□ 0.98
ATG4D-204ENST00000586417 EIF4EBP2Q13542 120 aaPredicted RBP21.16■□□□□ 0.98
ATG4D-204ENST00000586417 MTMR3Q13615 1198 aa21.16■□□□□ 0.98
ATG4D-204ENST00000586417 P3H1Q32P28 736 aa21.16■□□□□ 0.98
ATG4D-204ENST00000586417 MGAT5BQ3V5L5 792 aa21.16■□□□□ 0.98
ATG4D-204ENST00000586417 SPDYCQ5MJ68 293 aa21.16■□□□□ 0.98
ATG4D-204ENST00000586417 IZUMO3Q5VZ72 239 aa21.16■□□□□ 0.98
ATG4D-204ENST00000586417 TPGS2Q68CL5 300 aa21.16■□□□□ 0.98
ATG4D-204ENST00000586417 LILRA6Q6PI73 481 aa21.16■□□□□ 0.98
ATG4D-204ENST00000586417 RBM23Q86U06 439 aaKnown RBP21.16■□□□□ 0.98
ATG4D-204ENST00000586417 UNC45BQ8IWX7 931 aa21.16■□□□□ 0.98
ATG4D-204ENST00000586417 NUP93Q8N1F7 819 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms