RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 HIC1Q14526 733 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 ZRSR2Q15696 482 aaKnown RBP12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 GEN1Q17RS7 908 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 UBR7Q8N806 425 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 PDCD6IPQ8WUM4 868 aaKnown RBP12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 FRMD8P1Q9BZ68 369 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 DMAP1Q9NPF5 467 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 CNTN3Q9P232 1028 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 MYO9BQ13459 2157 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 CCL23P55773 120 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 SESN3P58005 492 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 THOC5Q13769 683 aaKnown RBP12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 SPDYCQ5MJ68 293 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 NXNQ6DKJ4 435 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 TMEM110Q86TL2 294 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 RIBC1Q8N443 379 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 RYBPQ8N488 228 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 EPB41L4BQ9H329 900 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 ACTR5Q9H9F9 607 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 TLK1Q9UKI8 766 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 COL11A1P12107 1806 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 ATAD5Q96QE3 1844 aa12.83□□□□□ -0.35
SMARCA4-208ENST00000585799 RBM47A0AV96 593 aaKnown RBP12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 MDM4O15151 490 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 BGNP21810 368 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 TRNP1Q6NT89 227 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 C4orf50Q6ZRC1 276 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 RFX8Q6ZV50 586 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 IFNLR1Q8IU57 520 aaPredicted RBP12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 TOP6BLQ8N6T0 577 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 OR6P1Q8NGX9 317 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 TSSK1BQ9BXA7 367 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 METTL18O95568 372 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 APOEP02649 317 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 MX2P20592 715 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 SLC25A52Q3SY17 297 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 C16orf46Q6P387 395 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 CLEC20AQ6ZU45 233 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 ATAD1Q8NBU5 361 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 OR52K1Q8NGK4 314 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 PPP4R1Q8TF05 950 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 EXT2Q93063 718 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 P2RY11Q96G91 374 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 ZNF670Q9BS34 389 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 ADAM7Q9H2U9 754 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 C20orf96Q9NUD7 363 aaPredicted RBP12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 FER1L6Q2WGJ9 1857 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 GOLGA8CPA6NN73 597 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 PTGESO14684 152 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 IRF1P10914 325 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 ARFIP2P53365 341 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 OLIG2Q13516 323 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 PPP1R15BQ5SWA1 713 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 MORN1Q5T089 497 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 C17orf99Q6UX52 265 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 TRABD2AQ86V40 505 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 GIPC2Q8TF65 315 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 ZNF512Q96ME7 567 aaPredicted RBP12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 SP110Q9HB58 689 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 SLC24A2Q9UI40 661 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 PCDHB7Q9Y5E2 793 aa12.83□□□□□ -0.36
SMARCA4-208ENST00000585799 H0Y3Z8 333 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 SOAT2O75908 522 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 FBXO21O94952 628 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 ADRA1BP35368 520 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 SLC1A5Q15758 541 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 ZCCHC23Q6ZST2 131 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 SLC26A11Q86WA9 606 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 SLCO2A1Q92959 643 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 MANSC1Q9H8J5 431 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 XAB2Q9HCS7 855 aaKnown RBP12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 PRDM5Q9NQX1 630 aaPredicted RBP12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 SLC17A7Q9P2U7 560 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 ZFP69BQ9UJL9 534 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 SDR42E2A6NKP2 422 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 C3orf70A6NLC5 250 aaPredicted RBP12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 PIRO00625 290 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 ERVK-10P10266 1014 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 DEFB115Q30KQ5 88 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 TTC39BQ5VTQ0 682 aaPredicted RBP12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 ARHGAP17Q68EM7 881 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 ITPRIPL1Q6GPH6 555 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 KBTBD7Q8WVZ9 684 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 FBXO32Q969P5 355 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 HNRNPABQ99729 332 aaKnown RBP12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 KATNBL1Q9H079 304 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 ARHGEF4Q9NR80 690 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 VANGL2Q9ULK5 521 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 F8W810 466 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 PFKMP08237 780 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 L1CAMP32004 1257 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 SCTRP47872 440 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 CPA2P48052 419 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 POU6F1Q14863 301 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 CHI3L2Q15782 390 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 IL31Q6EBC2 164 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 RHBDF2Q6PJF5 856 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 CHSY1Q86X52 802 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 UNC5BQ8IZJ1 945 aa12.82□□□□□ -0.36
SMARCA4-208ENST00000585799 CRYBG2Q8N1P7 616 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms