RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 GUF1Q8N442 669 aaKnown RBP15.15■□□□□ 0.02
SDF2-202ENST00000585428 TTC39CQ8N584 583 aa15.15■□□□□ 0.02
SDF2-202ENST00000585428 GAREM1Q9H706 876 aa15.15■□□□□ 0.02
SDF2-202ENST00000585428 CISHQ9NSE2 258 aa15.15■□□□□ 0.02
SDF2-202ENST00000585428 STOML2Q9UJZ1 356 aa15.15■□□□□ 0.02
SDF2-202ENST00000585428 LHX6Q9UPM6 363 aa15.15■□□□□ 0.02
SDF2-202ENST00000585428 ADAMTS9Q9P2N4 1935 aa15.15■□□□□ 0.02
SDF2-202ENST00000585428 DSPP15924 2871 aaKnown RBP15.14■□□□□ 0.01
SDF2-202ENST00000585428 MEI4A8MW99 385 aa15.14■□□□□ 0.01
SDF2-202ENST00000585428 ZBED1O96006 694 aa15.14■□□□□ 0.01
SDF2-202ENST00000585428 TKTL1P51854 596 aa15.14■□□□□ 0.01
SDF2-202ENST00000585428 CAMK2GQ13555 558 aaPredicted RBP15.14■□□□□ 0.01
SDF2-202ENST00000585428 HLA-BQ31612 363 aa15.14■□□□□ 0.01
SDF2-202ENST00000585428 ZCWPW2Q504Y3 356 aa15.14■□□□□ 0.01
SDF2-202ENST00000585428 IL27RAQ6UWB1 636 aa15.14■□□□□ 0.01
SDF2-202ENST00000585428 KIAA0907Q7Z7F0 614 aaPredicted RBP15.14■□□□□ 0.01
SDF2-202ENST00000585428 ZCCHC9Q8N567 271 aaKnown RBP15.14■□□□□ 0.01
SDF2-202ENST00000585428 CCDC150Q8NCX0 1101 aa15.14■□□□□ 0.01
SDF2-202ENST00000585428 BAHD1Q8TBE0 780 aaPredicted RBP15.14■□□□□ 0.01
SDF2-202ENST00000585428 DDI1Q8WTU0 396 aa15.14■□□□□ 0.01
SDF2-202ENST00000585428 NDRG1Q92597 394 aaKnown RBP15.14■□□□□ 0.01
SDF2-202ENST00000585428 TATDN2Q93075 761 aa15.14■□□□□ 0.01
SDF2-202ENST00000585428 PLD4Q96BZ4 506 aa15.14■□□□□ 0.01
SDF2-202ENST00000585428 MIR1-1HGQ9H1L0 117 aa15.14■□□□□ 0.01
SDF2-202ENST00000585428 PCED1AQ9H1Q7 454 aa15.14■□□□□ 0.01
SDF2-202ENST00000585428 TMEM245Q9H330 911 aa15.14■□□□□ 0.01
SDF2-202ENST00000585428 TM7SF3Q9NS93 570 aa15.14■□□□□ 0.01
SDF2-202ENST00000585428 RAB20Q9NX57 234 aa15.14■□□□□ 0.01
SDF2-202ENST00000585428 EIF2B4Q9UI10 523 aaKnown RBP15.14■□□□□ 0.01
SDF2-202ENST00000585428 STRIP2Q9ULQ0 834 aa15.14■□□□□ 0.01
SDF2-202ENST00000585428 APOBEC2Q9Y235 224 aaKnown RBP15.14■□□□□ 0.01
SDF2-202ENST00000585428 GPSM3Q9Y4H4 160 aa15.14■□□□□ 0.01
SDF2-202ENST00000585428 PCDHGB2Q9Y5G2 931 aa15.14■□□□□ 0.01
SDF2-202ENST00000585428 CEP192Q8TEP8 1941 aa15.13■□□□□ 0.01
SDF2-202ENST00000585428 DKK1O94907 266 aa15.13■□□□□ 0.01
SDF2-202ENST00000585428 EPHX1P07099 455 aa15.13■□□□□ 0.01
SDF2-202ENST00000585428 ACADMP11310 421 aa15.13■□□□□ 0.01
SDF2-202ENST00000585428 IGF2RP11717 2491 aa15.13■□□□□ 0.01
SDF2-202ENST00000585428 HOXD9P28356 352 aaPredicted RBP15.13■□□□□ 0.01
SDF2-202ENST00000585428 NDUFA8P51970 172 aa15.13■□□□□ 0.01
SDF2-202ENST00000585428 PDE4CQ08493 712 aa15.13■□□□□ 0.01
SDF2-202ENST00000585428 MPPE1Q53F39 396 aa15.13■□□□□ 0.01
SDF2-202ENST00000585428 RSRC2Q7L4I2 434 aaKnown RBP15.13■□□□□ 0.01
SDF2-202ENST00000585428 FBXL13Q8NEE6 735 aa15.13■□□□□ 0.01
SDF2-202ENST00000585428 OR2T3Q8NH03 318 aa15.13■□□□□ 0.01
SDF2-202ENST00000585428 ARID3AQ99856 593 aa15.13■□□□□ 0.01
SDF2-202ENST00000585428 CIPCQ9C0C6 399 aa15.13■□□□□ 0.01
SDF2-202ENST00000585428 MMRN2Q9H8L6 949 aa15.13■□□□□ 0.01
SDF2-202ENST00000585428 TOR4AQ9NXH8 423 aa15.13■□□□□ 0.01
SDF2-202ENST00000585428 FAM208BQ5VWN6 2430 aa15.12■□□□□ 0.01
SDF2-202ENST00000585428 TULP2O00295 520 aa15.12■□□□□ 0.01
SDF2-202ENST00000585428 HLA-FP30511 346 aa15.12■□□□□ 0.01
SDF2-202ENST00000585428 ACSL1P33121 698 aa15.12■□□□□ 0.01
SDF2-202ENST00000585428 MATKP42679 507 aa15.12■□□□□ 0.01
SDF2-202ENST00000585428 SYKP43405 635 aa15.12■□□□□ 0.01
SDF2-202ENST00000585428 CSNK1EP49674 416 aaKnown RBP15.12■□□□□ 0.01
SDF2-202ENST00000585428 EDRF1Q3B7T1 1238 aa15.12■□□□□ 0.01
SDF2-202ENST00000585428 SERPINA13PQ6UXR4 307 aa15.12■□□□□ 0.01
SDF2-202ENST00000585428 ADIPOR2Q86V24 386 aa15.12■□□□□ 0.01
SDF2-202ENST00000585428 SETD7Q8WTS6 366 aaKnown RBP15.12■□□□□ 0.01
SDF2-202ENST00000585428 TMA16Q96EY4 203 aaKnown RBP15.12■□□□□ 0.01
SDF2-202ENST00000585428 ULBP1Q9BZM6 244 aa15.12■□□□□ 0.01
SDF2-202ENST00000585428 OSGEPQ9NPF4 335 aa15.12■□□□□ 0.01
SDF2-202ENST00000585428 OLA1Q9NTK5 396 aaKnown RBP15.12■□□□□ 0.01
SDF2-202ENST00000585428 PLA2G4CQ9UP65 541 aa15.12■□□□□ 0.01
SDF2-202ENST00000585428 FNDC3AQ9Y2H6 1198 aaKnown RBP15.12■□□□□ 0.01
SDF2-202ENST00000585428 COQ4Q9Y3A0 265 aa15.12■□□□□ 0.01
SDF2-202ENST00000585428 SLCO1B1Q9Y6L6 691 aa15.12■□□□□ 0.01
SDF2-202ENST00000585428 LAMA5O15230 3695 aa15.12■□□□□ 0.01
SDF2-202ENST00000585428 A0A1B0GVT2 93 aa15.11■□□□□ 0.01
SDF2-202ENST00000585428 XPO1O14980 1071 aaKnown RBP15.11■□□□□ 0.01
SDF2-202ENST00000585428 CER1O95813 267 aa15.11■□□□□ 0.01
SDF2-202ENST00000585428 HLA-EP13747 358 aa15.11■□□□□ 0.01
SDF2-202ENST00000585428 HARS2P49590 506 aaKnown RBP15.11■□□□□ 0.01
SDF2-202ENST00000585428 SLC8A3P57103 927 aa15.11■□□□□ 0.01
SDF2-202ENST00000585428 PTPRNQ16849 979 aa15.11■□□□□ 0.01
SDF2-202ENST00000585428 ADGRF1Q5T601 910 aa15.11■□□□□ 0.01
SDF2-202ENST00000585428 BSPRYQ5W0U4 402 aa15.11■□□□□ 0.01
SDF2-202ENST00000585428 TMPRSS7Q7RTY8 843 aa15.11■□□□□ 0.01
SDF2-202ENST00000585428 FMNL3Q8IVF7 1028 aa15.11■□□□□ 0.01
SDF2-202ENST00000585428 SCML4Q8N228 414 aa15.11■□□□□ 0.01
SDF2-202ENST00000585428 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.11■□□□□ 0.01
SDF2-202ENST00000585428 CCDC47Q96A33 483 aaKnown RBP15.11■□□□□ 0.01
SDF2-202ENST00000585428 EEF2KMTQ96G04 330 aa15.11■□□□□ 0.01
SDF2-202ENST00000585428 CCDC86Q9H6F5 360 aaKnown RBP15.11■□□□□ 0.01
SDF2-202ENST00000585428 C6orf106Q9H6K1 298 aaPredicted RBP15.11■□□□□ 0.01
SDF2-202ENST00000585428 PRSS16Q9NQE7 514 aa15.11■□□□□ 0.01
SDF2-202ENST00000585428 SFMBT1Q9UHJ3 866 aa15.11■□□□□ 0.01
SDF2-202ENST00000585428 ZDHHC9Q9Y397 364 aa15.11■□□□□ 0.01
SDF2-202ENST00000585428 HBS1LQ9Y450 684 aaKnown RBP15.11■□□□□ 0.01
SDF2-202ENST00000585428 CACNA1GO43497 2377 aa15.1■□□□□ 0.01
SDF2-202ENST00000585428 YJEFN3A6XGL0 299 aa15.1■□□□□ 0.01
SDF2-202ENST00000585428 E7ENQ6 273 aa15.1■□□□□ 0.01
SDF2-202ENST00000585428 STX10O60499 249 aa15.1■□□□□ 0.01
SDF2-202ENST00000585428 TSPAN3O60637 253 aa15.1■□□□□ 0.01
SDF2-202ENST00000585428 HSP90AA1P07900 732 aaKnown RBP15.1■□□□□ 0.01
SDF2-202ENST00000585428 ATXN1LP0C7T5 689 aaKnown RBP15.1■□□□□ 0.01
SDF2-202ENST00000585428 AFF3P51826 1226 aaKnown RBP15.1■□□□□ 0.01
SDF2-202ENST00000585428 ZNF445P59923 1031 aa15.1■□□□□ 0.01
SDF2-202ENST00000585428 KIF19Q2TAC6 998 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms