RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 TMEM41AQ96HV5 264 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 KRTAP9-3Q9BYQ3 159 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 WDR12Q9GZL7 423 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 BTBD1Q9H0C5 482 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 OLA1Q9NTK5 396 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 TRPM5Q9NZQ8 1165 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 AFF4Q9UHB7 1163 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 COL4A4P53420 1690 aaPredicted RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 HTRA2O43464 458 aaPredicted RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 CCNT2O60583 730 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 SNX2O60749 519 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 INMTO95050 263 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 ITGA2BP08514 1039 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 DHRS4L1P0CG22 281 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 CKBP12277 381 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 IL1R1P14778 569 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 PTGER1P34995 402 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 RCAN1P53805 252 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 TERF1P54274 439 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 HUNKP57058 714 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 POU5F1Q01860 360 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 PMS2P11Q13670 270 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 PSMD6Q15008 389 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 CDSNQ15517 529 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 C3orf36Q3SXR2 165 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 ZACNQ401N2 412 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 ESRP1Q6NXG1 681 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 ARMC9Q7Z3E5 817 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 RD3Q7Z3Z2 195 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 RTN4RL1Q86UN2 441 aaPredicted RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 PHKBQ93100 1093 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 JAKMIP2Q96AA8 810 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 TBC1D20Q96BZ9 403 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 PHACTR3Q96KR7 559 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 NELL2Q99435 816 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 PRDM12Q9H4Q4 367 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 WDCPQ9H6R7 721 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 PLEKHA5Q9HAU0 1116 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 AGO4Q9HCK5 861 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 OBP2BQ9NPH6 170 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 NRIP3Q9NQ35 241 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 BAG5Q9UL15 447 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 ASAP1Q9ULH1 1129 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 NOL7Q9UMY1 257 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 CRYL1Q9Y2S2 319 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 IPPQ9Y573 584 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 DMRT1Q9Y5R6 373 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 FAM170AA1A519 330 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 GPR32O75388 356 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 RNASEH2AO75792 299 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 RASAL1O95294 804 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 GJB1P08034 283 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 DDX6P26196 483 aaKnown RBP eCLIP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 ARL3P36405 182 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 MTNR1BP49286 362 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 PRKAG1P54619 331 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 RAP2BP61225 183 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 RAB1AP62820 205 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 ZNF543Q08ER8 600 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 SLC13A2Q13183 592 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 DAG1Q14118 895 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 PLCB4Q15147 1175 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 DLGAP5Q15398 846 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 CNGA2Q16280 664 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 DACT2Q5SW24 774 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 VPS53Q5VIR6 699 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 SUGP1Q8IWZ8 645 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 MB21D1Q8N884 522 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 FANCBQ8NB91 859 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 CCDC34Q96HJ3 373 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 UBXN10Q96LJ8 280 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 CCDC17Q96LX7 622 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 PPM1MQ96MI6 270 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 VEZTQ9HBM0 779 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 EIF2B3Q9NR50 452 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 WWOXQ9NZC7 414 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 CFAP97Q9P2B7 532 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 THEGQ9P2T0 379 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 L1RE1Q9UN81 338 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 TMX2Q9Y320 296 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 PCDHGB3Q9Y5G1 929 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 NUMBLQ9Y6R0 609 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 CCDC196A0A1B0GTZ2 297 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 MANSC4A6NHS7 340 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 EYA2O00167 538 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 FCHO1O14526 889 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 HOXA3O43365 443 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 NARSO43776 548 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 IL18BPO95998 194 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 ANXA1P04083 346 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 THP07101 528 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 EDNRBP24530 442 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 HOXD10P28358 340 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 HSPA7P48741 367 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 CARSP49589 748 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 ALDH5A1P51649 535 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 ITGA8P53708 1063 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 SOX8P57073 446 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 PSMC1P62191 440 aaKnown RBP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms